RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 KRTAP10-1P60331 282 aa6.22□□□□□ -1.41
TMEM260-213ENST00000556929 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
TMEM260-213ENST00000556929 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
TMEM260-213ENST00000556929 Q6ZVH6 145 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 C12orf57Q99622 126 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 MIEN1Q9BRT3 115 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
TMEM260-213ENST00000556929 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
TMEM260-213ENST00000556929 DAND5Q8N907 189 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 COPS9Q8WXC6 57 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 SPANXDQ9BXN6 97 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 SPANXCQ9NY87 97 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 UQCR10Q9UDW1 63 aa6.2□□□□□ -1.42
TMEM260-213ENST00000556929 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
TMEM260-213ENST00000556929 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
TMEM260-213ENST00000556929 SRSF9Q13242 221 aaKnown RBP eCLIP6.19□□□□□ -1.42
TMEM260-213ENST00000556929 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
TMEM260-213ENST00000556929 Q6ZSA8 131 aa6.19□□□□□ -1.42
TMEM260-213ENST00000556929 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
TMEM260-213ENST00000556929 LITAFQ99732 161 aa6.19□□□□□ -1.42
TMEM260-213ENST00000556929 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
TMEM260-213ENST00000556929 PLA2G2DQ9UNK4 145 aa6.19□□□□□ -1.42
TMEM260-213ENST00000556929 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 PANO1I0J062 215 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 IFITM1P13164 125 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 NPC2P61916 151 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
TMEM260-213ENST00000556929 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
TMEM260-213ENST00000556929 A0A087WYN8 130 aa6.17□□□□□ -1.42
TMEM260-213ENST00000556929 TSTD3H0UI37 97 aa6.17□□□□□ -1.42
TMEM260-213ENST00000556929 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
TMEM260-213ENST00000556929 PRO1933Q9H354 126 aa6.17□□□□□ -1.42
TMEM260-213ENST00000556929 TP73-AS1Q9UF72 201 aa6.17□□□□□ -1.42
TMEM260-213ENST00000556929 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
TMEM260-213ENST00000556929 A0A1W2PNN7 141 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 FAM19A5Q7Z5A7 132 aaPredicted RBP6.16□□□□□ -1.42
TMEM260-213ENST00000556929 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 NKAPP1Q8N9T2 125 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 HIST1H4GQ99525 98 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 PPDPFQ9H3Y8 114 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
TMEM260-213ENST00000556929 FAM168BA1KXE4 195 aa6.15□□□□□ -1.42
TMEM260-213ENST00000556929 NDUFC2O95298 119 aa6.15□□□□□ -1.42
TMEM260-213ENST00000556929 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
TMEM260-213ENST00000556929 TAL2Q16559 108 aa6.15□□□□□ -1.42
TMEM260-213ENST00000556929 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
TMEM260-213ENST00000556929 CIRBP-AS1Q8TBR5 109 aa6.15□□□□□ -1.42
TMEM260-213ENST00000556929 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
TMEM260-213ENST00000556929 LBHQ53QV2 105 aaPredicted RBP6.14□□□□□ -1.43
TMEM260-213ENST00000556929 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
TMEM260-213ENST00000556929 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
TMEM260-213ENST00000556929 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
TMEM260-213ENST00000556929 PKHD1P08F94 4074 aa6.14□□□□□ -1.43
TMEM260-213ENST00000556929 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
TMEM260-213ENST00000556929 M0QXV9 152 aa6.13□□□□□ -1.43
TMEM260-213ENST00000556929 CDK2AP2O75956 126 aa6.13□□□□□ -1.43
TMEM260-213ENST00000556929 VPREB1P12018 145 aa6.13□□□□□ -1.43
TMEM260-213ENST00000556929 XGP55808 180 aa6.13□□□□□ -1.43
TMEM260-213ENST00000556929 TRBV10-2A0A0K0K1G8 114 aa6.12□□□□□ -1.43
TMEM260-213ENST00000556929 M0R378 163 aa6.12□□□□□ -1.43
TMEM260-213ENST00000556929 HSD52Q0P140 79 aa6.12□□□□□ -1.43
TMEM260-213ENST00000556929 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
TMEM260-213ENST00000556929 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
TMEM260-213ENST00000556929 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
TMEM260-213ENST00000556929 NCR3O14931 201 aa6.11□□□□□ -1.43
TMEM260-213ENST00000556929 UBE2BP63146 152 aa6.11□□□□□ -1.43
TMEM260-213ENST00000556929 HAMPP81172 84 aa6.11□□□□□ -1.43
TMEM260-213ENST00000556929 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
TMEM260-213ENST00000556929 CEND1Q8N111 149 aa6.11□□□□□ -1.43
TMEM260-213ENST00000556929 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
TMEM260-213ENST00000556929 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
TMEM260-213ENST00000556929 A4D1N5 150 aa6.1□□□□□ -1.43
TMEM260-213ENST00000556929 PRR3P79522 188 aaKnown RBP6.1□□□□□ -1.43
TMEM260-213ENST00000556929 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
TMEM260-213ENST00000556929 Q8NDZ9 215 aa6.1□□□□□ -1.43
TMEM260-213ENST00000556929 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
TMEM260-213ENST00000556929 GAGE10A6NGK3 116 aa6.09□□□□□ -1.43
TMEM260-213ENST00000556929 OR13C6PQ8NH95 151 aa6.09□□□□□ -1.43
TMEM260-213ENST00000556929 CBY1Q9Y3M2 126 aa6.09□□□□□ -1.43
TMEM260-213ENST00000556929 TRAV13-2A0A0B4J235 113 aa6.08□□□□□ -1.44
TMEM260-213ENST00000556929 DDTP30046 118 aa6.08□□□□□ -1.44
TMEM260-213ENST00000556929 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
TMEM260-213ENST00000556929 IGLV1-50A0A075B6I6 118 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 IGKV2-28A0A075B6P5 120 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 A6NDN8 102 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 IGKV2D-28P01615 120 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 SMR3BP02814 79 aaPredicted RBP6.07□□□□□ -1.44
TMEM260-213ENST00000556929 CTAG1AP78358 180 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 RAB37Q96AX2 223 aa6.07□□□□□ -1.44
TMEM260-213ENST00000556929 TRBV10-3A0A0K0K1G6 114 aa6.06□□□□□ -1.44
TMEM260-213ENST00000556929 M0R143 59 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms