RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-244ENST00000556898 Q6ZRU5 148 aa3.44□□□□□ -1.86
ATXN3-244ENST00000556898 LINC01561Q8N1V8 128 aa3.44□□□□□ -1.86
ATXN3-244ENST00000556898 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-244ENST00000556898 HSBP1L1C9JCN9 74 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 APOMO95445 188 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 PRSS2P07478 247 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 LGALS3P17931 250 aaKnown RBP3.43□□□□□ -1.86
ATXN3-244ENST00000556898 C6orf226Q5I0X4 101 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 Q8IZM0 81 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 Q8N814 137 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 NDUFA12Q9UI09 145 aa3.43□□□□□ -1.86
ATXN3-244ENST00000556898 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
ATXN3-244ENST00000556898 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 ZNF815PA8K554 130 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 NDUFA1O15239 70 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 SMIM13P0DJ93 91 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 COX8AP10176 69 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 S100A12P80511 92 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 SYCNQ0VAF6 134 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 DAND5Q8N907 189 aa3.42□□□□□ -1.86
ATXN3-244ENST00000556898 PFN2P35080 140 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 CKS1BP61024 79 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 NPC2P61916 151 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 CARD19Q96LW7 228 aa3.41□□□□□ -1.86
ATXN3-244ENST00000556898 IGKV2-30P06310 120 aa3.4□□□□□ -1.87
ATXN3-244ENST00000556898 SLC25A34Q6PIV7 304 aa3.4□□□□□ -1.87
ATXN3-244ENST00000556898 C2orf48Q96LS8 159 aa3.4□□□□□ -1.87
ATXN3-244ENST00000556898 LITAFQ99732 161 aa3.4□□□□□ -1.87
ATXN3-244ENST00000556898 ERG28Q9UKR5 140 aa3.4□□□□□ -1.87
ATXN3-244ENST00000556898 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-244ENST00000556898 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 PANO1I0J062 215 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 DLEU1O43261 78 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 CHTF8P0CG12 524 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 LINC00158P58513 81 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 SOSTDC1Q6X4U4 206 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 SCGB1D4Q6XE38 83 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 MIR7-3HGQ8N6C7 128 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 Q8NDZ9 215 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 UQCR10Q9UDW1 63 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
ATXN3-244ENST00000556898 A0A096LNI7 61 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 IGLV5-52A0A0A0MRZ9 124 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 TRBV30A0A0K0K1B3 111 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 CXCL5P42830 114 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 CNBPP62633 177 aaKnown RBP3.38□□□□□ -1.87
ATXN3-244ENST00000556898 HERV-K104P63124 156 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
ATXN3-244ENST00000556898 C14orf177Q52M58 125 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
ATXN3-244ENST00000556898 Q5VSD8 79 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 Q6ZRP5 223 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 MUSTN1Q8IVN3 82 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 C9orf163Q8N9P6 203 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 MIEN1Q9BRT3 115 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 XAGE1AQ9HD64 81 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
ATXN3-244ENST00000556898 FAM168BA1KXE4 195 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 HNRNPA3P51991 378 aaKnown RBP3.37□□□□□ -1.87
ATXN3-244ENST00000556898 XGP55808 180 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 CTAG1AP78358 180 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
ATXN3-244ENST00000556898 HAMPP81172 84 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 SDIM1Q6ZPB5 146 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 SND1-IT1Q9HBX3 110 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 FAT1Q14517 4588 aa3.37□□□□□ -1.87
ATXN3-244ENST00000556898 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-244ENST00000556898 LOC107984640A0A0U1RRK4 108 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 NDUFC2-KCTD14E9PQ53 114 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 F8WDY8 70 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 TSTD3H0UI37 97 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 TLX1NBP0CAT3 122 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 SERTAD4-AS1Q5TG53 156 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 HIST1H4GQ99525 98 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 SPANXDQ9BXN6 97 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-244ENST00000556898 SPANXCQ9NY87 97 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 HIGD1BQ9P298 99 aa3.36□□□□□ -1.87
ATXN3-244ENST00000556898 A0A1W2PNN7 141 aa3.35□□□□□ -1.87
ATXN3-244ENST00000556898 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
ATXN3-244ENST00000556898 TIMM17BO60830 172 aa3.35□□□□□ -1.87
ATXN3-244ENST00000556898 DDTP30046 118 aa3.35□□□□□ -1.87
ATXN3-244ENST00000556898 HINT1P49773 126 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-244ENST00000556898 FXYD2P54710 66 aa3.35□□□□□ -1.87
ATXN3-244ENST00000556898 SRSF9Q13242 221 aaKnown RBP eCLIP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms