RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 COL6A5A8TX70 2615 aa3.66□□□□□ -1.82
GPHN-213ENST00000556501 GVQW2A0A096LPI5 108 aaPredicted RBP3.65□□□□□ -1.83
GPHN-213ENST00000556501 A0A0J9YWU9 116 aa3.65□□□□□ -1.83
GPHN-213ENST00000556501 OBSCN-AS1Q96MR7 158 aa3.65□□□□□ -1.83
GPHN-213ENST00000556501 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
GPHN-213ENST00000556501 NHLRC4P0CG21 123 aaPredicted RBP3.64□□□□□ -1.83
GPHN-213ENST00000556501 NDUFV3P56181 108 aaKnown RBP3.64□□□□□ -1.83
GPHN-213ENST00000556501 EGFEM1PQ0D2K5 195 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 C9orf116Q5BN46 136 aaPredicted RBP3.64□□□□□ -1.83
GPHN-213ENST00000556501 LYPD5Q6UWN5 251 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 ENHOQ6UWT2 76 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 LINC00643Q86TS7 51 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 SMCR5Q8TEV8 140 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 TMEM126AQ9H061 195 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 RETNQ9HD89 108 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 KLK12Q9UKR0 248 aa3.64□□□□□ -1.83
GPHN-213ENST00000556501 CUBNO60494 3623 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 NCR3O14931 201 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 KRTAP10-11P60412 298 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 PRR3P79522 188 aaKnown RBP3.63□□□□□ -1.83
GPHN-213ENST00000556501 C10orf25Q5T742 122 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 GAGE2AQ6NT46 116 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 C6orf223Q8N319 242 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 Q8NDZ9 215 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 IMUPQ9GZP8 106 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 ORMDL1Q9P0S3 153 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 NBEAL2Q6ZNJ1 2754 aa3.63□□□□□ -1.83
GPHN-213ENST00000556501 IGLV6-57P01721 117 aa3.62□□□□□ -1.83
GPHN-213ENST00000556501 KRTAP24-1Q3LI83 254 aa3.62□□□□□ -1.83
GPHN-213ENST00000556501 C9orf129Q5T035 196 aaKnown RBP3.62□□□□□ -1.83
GPHN-213ENST00000556501 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
GPHN-213ENST00000556501 KRTAP26-1Q6PEX3 210 aa3.62□□□□□ -1.83
GPHN-213ENST00000556501 WFDC10BQ8IUB3 73 aa3.62□□□□□ -1.83
GPHN-213ENST00000556501 Q8N814 137 aa3.62□□□□□ -1.83
GPHN-213ENST00000556501 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
GPHN-213ENST00000556501 PKD1L1Q8TDX9 2849 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 SLPIP03973 132 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 S100A7L2Q5SY68 101 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 Q6ZTC4 211 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 LINC00526Q96FQ7 95 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
GPHN-213ENST00000556501 F8WDY8 70 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 JMJD7-PLA2G4BH0Y9G9 81 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
GPHN-213ENST00000556501 C6orf99Q4VX62 202 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 LINC01556Q5JQF7 62 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 Q6JHZ5 121 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 LINC00575Q6W349 94 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 C15orf56Q8N910 161 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
GPHN-213ENST00000556501 TRBV10-3A0A0K0K1G6 114 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 TMEM256-PLSCR3K7ERE1 68 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 CCKP06307 115 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 C3orf56Q8N813 242 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 CAMK2N2Q96S95 79 aa3.59□□□□□ -1.83
GPHN-213ENST00000556501 NBEAL1Q6ZS30 2694 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 DEFB131BA0A096LNP1 70 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 TRBV7-6A0A0J9YX20 115 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 H3BQ85 93 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 VPREB1P12018 145 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 HIST1H4AP62805 103 aaKnown RBP3.58□□□□□ -1.84
GPHN-213ENST00000556501 ESRGQ1W209 222 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 HIGD2BQ4VC39 106 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 DIRC1Q969H9 104 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 TENM3Q9P273 2699 aa3.58□□□□□ -1.84
GPHN-213ENST00000556501 LOC110117498A0A087WWA1 95 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 M0R378 163 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 ZNF73O43830 326 aaPredicted RBP3.57□□□□□ -1.84
GPHN-213ENST00000556501 DNAH10OSP0CZ25 163 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 NOTCH1P46531 2555 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 ATP5EP2Q5VTU8 51 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 Q6ZRU5 148 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 C11orf45Q8TAV5 145 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
GPHN-213ENST00000556501 COX7BP24311 80 aa3.56□□□□□ -1.84
GPHN-213ENST00000556501 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
GPHN-213ENST00000556501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
GPHN-213ENST00000556501 FBN1P35555 2871 aaKnown RBP3.55□□□□□ -1.84
GPHN-213ENST00000556501 IGKV2D-24A0A075B6R9 120 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 TRAV10A0A0B4J240 114 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 ATOX1O00244 68 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 PDE6GP18545 87 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 RBM3P98179 157 aaKnown RBP3.55□□□□□ -1.84
GPHN-213ENST00000556501 SYCNQ0VAF6 134 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 Q6ZQT0 140 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 Q6ZQY7 126 aa3.55□□□□□ -1.84
GPHN-213ENST00000556501 TM2D3Q9BRN9 247 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms