RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CHD7Q9P2D1 2997 aa3.86□□□□□ -1.79
TDP1-215ENST00000556498 A0A096LNT2 108 aa3.85□□□□□ -1.79
TDP1-215ENST00000556498 A8MUU9 505 aa3.85□□□□□ -1.79
TDP1-215ENST00000556498 PRB2P02812 416 aaPredicted RBP3.85□□□□□ -1.79
TDP1-215ENST00000556498 Q8N9L7 120 aa3.85□□□□□ -1.79
TDP1-215ENST00000556498 CACNA1DQ01668 2161 aa3.85□□□□□ -1.79
TDP1-215ENST00000556498 DNAJC13O75165 2243 aa3.85□□□□□ -1.79
TDP1-215ENST00000556498 IGKV2D-24A0A075B6R9 120 aa3.84□□□□□ -1.79
TDP1-215ENST00000556498 PRB1P04280 392 aa3.84□□□□□ -1.79
TDP1-215ENST00000556498 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.84□□□□□ -1.79
TDP1-215ENST00000556498 C15orf56Q8N910 161 aa3.84□□□□□ -1.79
TDP1-215ENST00000556498 DEFB124Q8NES8 71 aa3.84□□□□□ -1.79
TDP1-215ENST00000556498 LAMA3Q16787 3333 aa3.83□□□□□ -1.8
TDP1-215ENST00000556498 TRGV1A0A0A0MS02 117 aa3.83□□□□□ -1.8
TDP1-215ENST00000556498 A0A1B0GU69 56 aa3.83□□□□□ -1.8
TDP1-215ENST00000556498 ZNRD1Q9P1U0 126 aa3.83□□□□□ -1.8
TDP1-215ENST00000556498 RANBP2P49792 3224 aaKnown RBP3.82□□□□□ -1.8
TDP1-215ENST00000556498 TNCP24821 2201 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 SPAG17Q6Q759 2223 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 UNC13CQ8NB66 2214 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 IGKV3OR2-268A0A0C4DH90 116 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 INSP01308 110 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 PRB3Q04118 309 aaPredicted RBP3.82□□□□□ -1.8
TDP1-215ENST00000556498 C10orf55Q5SWW7 151 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 C4orf3Q8WVX3 66 aa3.82□□□□□ -1.8
TDP1-215ENST00000556498 PANO1I0J062 215 aa3.81□□□□□ -1.8
TDP1-215ENST00000556498 COX6A2Q02221 97 aa3.81□□□□□ -1.8
TDP1-215ENST00000556498 TP53AIP1Q9HCN2 124 aa3.81□□□□□ -1.8
TDP1-215ENST00000556498 KLK12Q9UKR0 248 aa3.81□□□□□ -1.8
TDP1-215ENST00000556498 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
TDP1-215ENST00000556498 CR1P17927 2039 aa3.81□□□□□ -1.8
TDP1-215ENST00000556498 KNTC1P50748 2209 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 DOCK10Q96BY6 2186 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 MRGPRG-AS1Q2M3A8 158 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 ZNF407Q9C0G0 2248 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 TRANK1O15050 2925 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 CDH23Q9H251 3354 aa3.8□□□□□ -1.8
TDP1-215ENST00000556498 A0A1W2PNU3 283 aaPredicted RBP3.79□□□□□ -1.8
TDP1-215ENST00000556498 USF3Q68DE3 2245 aa3.79□□□□□ -1.8
TDP1-215ENST00000556498 ZFHX3Q15911 3703 aa3.79□□□□□ -1.8
TDP1-215ENST00000556498 IGLV5-48A0A075B6I7 105 aa3.78□□□□□ -1.8
TDP1-215ENST00000556498 HRES1P13985 223 aa3.78□□□□□ -1.8
TDP1-215ENST00000556498 ACYP2P14621 99 aa3.78□□□□□ -1.8
TDP1-215ENST00000556498 ZDBF2Q9HCK1 2354 aa3.78□□□□□ -1.8
TDP1-215ENST00000556498 CACNA1EQ15878 2313 aa3.78□□□□□ -1.8
TDP1-215ENST00000556498 KRTAP29-1A8MX34 341 aaPredicted RBP3.77□□□□□ -1.81
TDP1-215ENST00000556498 DSCR10P59022 87 aa3.77□□□□□ -1.81
TDP1-215ENST00000556498 KLK9Q2XQG4 91 aa3.77□□□□□ -1.81
TDP1-215ENST00000556498 PRR9Q5T870 116 aa3.77□□□□□ -1.81
TDP1-215ENST00000556498 LINC00472Q9H8W2 130 aa3.77□□□□□ -1.81
TDP1-215ENST00000556498 ALPK2Q86TB3 2170 aa3.76□□□□□ -1.81
TDP1-215ENST00000556498 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
TDP1-215ENST00000556498 TNRC18O15417 2968 aaPredicted RBP3.76□□□□□ -1.81
TDP1-215ENST00000556498 Q8NBF4 154 aa3.75□□□□□ -1.81
TDP1-215ENST00000556498 SDK2Q58EX2 2172 aa3.75□□□□□ -1.81
TDP1-215ENST00000556498 PRR14LQ5THK1 2151 aa3.75□□□□□ -1.81
TDP1-215ENST00000556498 SPTBN5Q9NRC6 3674 aaKnown RBP3.74□□□□□ -1.81
TDP1-215ENST00000556498 GPR179Q6PRD1 2367 aa3.74□□□□□ -1.81
TDP1-215ENST00000556498 SZT2Q5T011 3432 aa3.74□□□□□ -1.81
TDP1-215ENST00000556498 K7EQZ3 153 aa3.74□□□□□ -1.81
TDP1-215ENST00000556498 ANGP03950 147 aaKnown RBP3.74□□□□□ -1.81
TDP1-215ENST00000556498 IGLV7-43P04211 117 aa3.74□□□□□ -1.81
TDP1-215ENST00000556498 DEFB109BQ30KR1 87 aa3.74□□□□□ -1.81
TDP1-215ENST00000556498 KNL1Q8NG31 2342 aa3.74□□□□□ -1.81
TDP1-215ENST00000556498 ZNF318Q5VUA4 2279 aa3.73□□□□□ -1.81
TDP1-215ENST00000556498 SVILO95425 2214 aa3.73□□□□□ -1.81
TDP1-215ENST00000556498 SDK1Q7Z5N4 2213 aa3.73□□□□□ -1.81
TDP1-215ENST00000556498 A0A087WTM6 91 aa3.73□□□□□ -1.81
TDP1-215ENST00000556498 TOMM7Q9P0U1 55 aa3.73□□□□□ -1.81
TDP1-215ENST00000556498 ASXL3Q9C0F0 2248 aa3.72□□□□□ -1.81
TDP1-215ENST00000556498 A0A0J9YWU9 116 aa3.72□□□□□ -1.81
TDP1-215ENST00000556498 A0A1B0GU33 70 aa3.72□□□□□ -1.81
TDP1-215ENST00000556498 RP1P56715 2156 aa3.72□□□□□ -1.81
TDP1-215ENST00000556498 DEFB104AQ8WTQ1 72 aa3.71□□□□□ -1.82
TDP1-215ENST00000556498 KRTAP1-5Q9BYS1 174 aa3.71□□□□□ -1.82
TDP1-215ENST00000556498 XIRP2A4UGR9 3374 aa3.71□□□□□ -1.82
TDP1-215ENST00000556498 CACNA1HO95180 2353 aa3.7□□□□□ -1.82
TDP1-215ENST00000556498 TTC28Q96AY4 2481 aa3.7□□□□□ -1.82
TDP1-215ENST00000556498 OTOGLQ3ZCN5 2332 aa3.7□□□□□ -1.82
TDP1-215ENST00000556498 LYNX1G3V0Z9 82 aa3.7□□□□□ -1.82
TDP1-215ENST00000556498 KRTAP17-1Q9BYP8 105 aa3.7□□□□□ -1.82
TDP1-215ENST00000556498 COL27A1Q8IZC6 1860 aaPredicted RBP3.7□□□□□ -1.82
TDP1-215ENST00000556498 LAMA2P24043 3122 aaKnown RBP3.7□□□□□ -1.82
TDP1-215ENST00000556498 NCOR1O75376 2440 aa3.7□□□□□ -1.82
TDP1-215ENST00000556498 ASCC3Q8N3C0 2202 aaKnown RBP3.7□□□□□ -1.82
TDP1-215ENST00000556498 CCL19Q99731 98 aa3.69□□□□□ -1.82
TDP1-215ENST00000556498 ANAPC11Q9NYG5 84 aa3.69□□□□□ -1.82
TDP1-215ENST00000556498 KRTAP24-1Q3LI83 254 aa3.68□□□□□ -1.82
TDP1-215ENST00000556498 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
TDP1-215ENST00000556498 DIDO1Q9BTC0 2240 aaKnown RBP3.68□□□□□ -1.82
TDP1-215ENST00000556498 C5orf42Q9H799 3197 aa3.68□□□□□ -1.82
TDP1-215ENST00000556498 UNC80Q8N2C7 3258 aa3.67□□□□□ -1.82
TDP1-215ENST00000556498 WFDC13Q8IUB5 93 aa3.67□□□□□ -1.82
TDP1-215ENST00000556498 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
TDP1-215ENST00000556498 C16orf74Q96GX8 76 aa3.67□□□□□ -1.82
TDP1-215ENST00000556498 Q96NJ1 140 aa3.67□□□□□ -1.82
TDP1-215ENST00000556498 SEC16AO15027 2179 aa3.67□□□□□ -1.82
TDP1-215ENST00000556498 WFDC10BQ8IUB3 73 aa3.66□□□□□ -1.82
TDP1-215ENST00000556498 KAAG1Q9UBP8 84 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms