RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 MT1HP80294 61 aa7.78□□□□□ -1.16
ACTN1-219ENST00000556432 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
ACTN1-219ENST00000556432 NXT2Q9NPJ8 142 aaKnown RBP7.78□□□□□ -1.16
ACTN1-219ENST00000556432 ZNF706Q9Y5V0 76 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-219ENST00000556432 ATP5LO75964 103 aa7.77□□□□□ -1.17
ACTN1-219ENST00000556432 SPINK1P00995 79 aa7.77□□□□□ -1.17
ACTN1-219ENST00000556432 PFN2P35080 140 aa7.77□□□□□ -1.17
ACTN1-219ENST00000556432 SPINK8P0C7L1 97 aa7.76□□□□□ -1.17
ACTN1-219ENST00000556432 VPREB1P12018 145 aa7.76□□□□□ -1.17
ACTN1-219ENST00000556432 SMCO4Q9NRQ5 59 aa7.76□□□□□ -1.17
ACTN1-219ENST00000556432 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
ACTN1-219ENST00000556432 FAM19A2Q8N3H0 131 aa7.75□□□□□ -1.17
ACTN1-219ENST00000556432 URB1-AS1Q96HZ7 61 aa7.75□□□□□ -1.17
ACTN1-219ENST00000556432 XP32Q5T750 250 aa7.74□□□□□ -1.17
ACTN1-219ENST00000556432 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
ACTN1-219ENST00000556432 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
ACTN1-219ENST00000556432 FA2HQ7L5A8 372 aa7.73□□□□□ -1.17
ACTN1-219ENST00000556432 TIMM17AQ99595 171 aa7.73□□□□□ -1.17
ACTN1-219ENST00000556432 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
ACTN1-219ENST00000556432 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
ACTN1-219ENST00000556432 K7EMI3 77 aa7.72□□□□□ -1.17
ACTN1-219ENST00000556432 G0S2P27469 103 aa7.72□□□□□ -1.17
ACTN1-219ENST00000556432 PMCHL1Q16048 86 aa7.72□□□□□ -1.17
ACTN1-219ENST00000556432 TOMM6Q96B49 74 aa7.72□□□□□ -1.17
ACTN1-219ENST00000556432 A0A096LNJ9 63 aa7.71□□□□□ -1.18
ACTN1-219ENST00000556432 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
ACTN1-219ENST00000556432 KRTAP19-2Q3LHN2 52 aa7.71□□□□□ -1.18
ACTN1-219ENST00000556432 SCGB3A1Q96QR1 104 aa7.71□□□□□ -1.18
ACTN1-219ENST00000556432 M0R2T5 61 aa7.7□□□□□ -1.18
ACTN1-219ENST00000556432 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
ACTN1-219ENST00000556432 IGLV5-45A0A087WSX0 123 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 COLCA2A8K830 154 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 H3BRM9 83 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 SLC25A20O43772 301 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 TRGC2P03986 189 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 ERASQ7Z444 233 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 Q8N377 158 aa7.69□□□□□ -1.18
ACTN1-219ENST00000556432 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
ACTN1-219ENST00000556432 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
ACTN1-219ENST00000556432 MOBPQ13875 183 aa7.68□□□□□ -1.18
ACTN1-219ENST00000556432 Q8NDZ9 215 aa7.68□□□□□ -1.18
ACTN1-219ENST00000556432 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
ACTN1-219ENST00000556432 LINC00614P0C842 121 aa7.67□□□□□ -1.18
ACTN1-219ENST00000556432 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
ACTN1-219ENST00000556432 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-219ENST00000556432 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
ACTN1-219ENST00000556432 HBDP02042 147 aa7.65□□□□□ -1.18
ACTN1-219ENST00000556432 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
ACTN1-219ENST00000556432 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
ACTN1-219ENST00000556432 SMCR5Q8TEV8 140 aa7.65□□□□□ -1.18
ACTN1-219ENST00000556432 LINC00310P59036 64 aa7.64□□□□□ -1.19
ACTN1-219ENST00000556432 COX17Q14061 63 aa7.64□□□□□ -1.19
ACTN1-219ENST00000556432 ETDCA0A1B0GVM5 59 aa7.63□□□□□ -1.19
ACTN1-219ENST00000556432 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.63□□□□□ -1.19
ACTN1-219ENST00000556432 PRYO14603 147 aa7.62□□□□□ -1.19
ACTN1-219ENST00000556432 PMVKQ15126 192 aa7.62□□□□□ -1.19
ACTN1-219ENST00000556432 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
ACTN1-219ENST00000556432 BAGE3Q86Y29 109 aa7.62□□□□□ -1.19
ACTN1-219ENST00000556432 SERF1AO75920 110 aa7.61□□□□□ -1.19
ACTN1-219ENST00000556432 NDUFA6P56556 154 aa7.61□□□□□ -1.19
ACTN1-219ENST00000556432 SSBP3-AS1Q7Z2R9 100 aa7.61□□□□□ -1.19
ACTN1-219ENST00000556432 CHCHD1Q96BP2 118 aaKnown RBP7.61□□□□□ -1.19
ACTN1-219ENST00000556432 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
ACTN1-219ENST00000556432 ATP6V1G1O75348 118 aa7.6□□□□□ -1.19
ACTN1-219ENST00000556432 LINC00158P58513 81 aa7.6□□□□□ -1.19
ACTN1-219ENST00000556432 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
ACTN1-219ENST00000556432 LINC01549A6NIU2 74 aa7.59□□□□□ -1.19
ACTN1-219ENST00000556432 NCR3O14931 201 aa7.59□□□□□ -1.19
ACTN1-219ENST00000556432 HSBP1O75506 76 aa7.59□□□□□ -1.19
ACTN1-219ENST00000556432 A0A0U1RRA0 63 aa7.58□□□□□ -1.2
ACTN1-219ENST00000556432 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
ACTN1-219ENST00000556432 IGLC3P0DOY3 106 aa7.58□□□□□ -1.2
ACTN1-219ENST00000556432 C9orf153Q5TBE3 101 aa7.58□□□□□ -1.2
ACTN1-219ENST00000556432 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
ACTN1-219ENST00000556432 C11orf86A6NJI1 115 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
ACTN1-219ENST00000556432 SFTA2Q6UW10 78 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 BOD1L2Q8IYS8 172 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
ACTN1-219ENST00000556432 H0Y8G0 127 aa7.55□□□□□ -1.2
ACTN1-219ENST00000556432 SPRR1AP35321 89 aa7.55□□□□□ -1.2
ACTN1-219ENST00000556432 S100A12P80511 92 aa7.55□□□□□ -1.2
ACTN1-219ENST00000556432 KCNQ1DNQ9H478 68 aa7.55□□□□□ -1.2
ACTN1-219ENST00000556432 ERC2-IT1O76042 136 aa7.54□□□□□ -1.2
ACTN1-219ENST00000556432 TMA7Q9Y2S6 64 aaKnown RBP7.54□□□□□ -1.2
ACTN1-219ENST00000556432 CHTOPQ9Y3Y2 248 aaKnown RBP7.54□□□□□ -1.2
ACTN1-219ENST00000556432 KRTAP4-16G5E9R7 235 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-219ENST00000556432 FABP4P15090 132 aa7.53□□□□□ -1.2
ACTN1-219ENST00000556432 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms