RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 PAPPA-AS1Q5QFB9 102 aa6.14□□□□□ -1.43
SYNE2-221ENST00000556342 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
SYNE2-221ENST00000556342 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
SYNE2-221ENST00000556342 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
SYNE2-221ENST00000556342 K7EMI3 77 aa6.13□□□□□ -1.43
SYNE2-221ENST00000556342 PRLHP81277 87 aa6.13□□□□□ -1.43
SYNE2-221ENST00000556342 PEA15Q15121 130 aa6.13□□□□□ -1.43
SYNE2-221ENST00000556342 SVBPQ8N300 66 aa6.13□□□□□ -1.43
SYNE2-221ENST00000556342 IGKV2-28A0A075B6P5 120 aa6.12□□□□□ -1.43
SYNE2-221ENST00000556342 IGKV2D-28P01615 120 aa6.12□□□□□ -1.43
SYNE2-221ENST00000556342 COX7B2Q8TF08 81 aa6.12□□□□□ -1.43
SYNE2-221ENST00000556342 TIMM17AQ99595 171 aa6.12□□□□□ -1.43
SYNE2-221ENST00000556342 RAB5BP61020 215 aa6.11□□□□□ -1.43
SYNE2-221ENST00000556342 PDZD11Q5EBL8 140 aa6.11□□□□□ -1.43
SYNE2-221ENST00000556342 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
SYNE2-221ENST00000556342 IGLV5-45A0A087WSX0 123 aa6.1□□□□□ -1.43
SYNE2-221ENST00000556342 SNAPINO95295 136 aa6.1□□□□□ -1.43
SYNE2-221ENST00000556342 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
SYNE2-221ENST00000556342 C3orf22Q8N5N4 141 aa6.1□□□□□ -1.43
SYNE2-221ENST00000556342 TOMM6Q96B49 74 aa6.1□□□□□ -1.43
SYNE2-221ENST00000556342 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
SYNE2-221ENST00000556342 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
SYNE2-221ENST00000556342 TINCRA0A1B0GVN0 87 aa6.09□□□□□ -1.43
SYNE2-221ENST00000556342 COLCA2A8K830 154 aa6.09□□□□□ -1.43
SYNE2-221ENST00000556342 G0S2P27469 103 aa6.09□□□□□ -1.43
SYNE2-221ENST00000556342 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-221ENST00000556342 FP248Q71RG6 208 aaPredicted RBP6.09□□□□□ -1.43
SYNE2-221ENST00000556342 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
SYNE2-221ENST00000556342 YPEL4Q96NS1 127 aa6.09□□□□□ -1.43
SYNE2-221ENST00000556342 TMEM238C9JI98 176 aa6.08□□□□□ -1.44
SYNE2-221ENST00000556342 SPINK8P0C7L1 97 aa6.08□□□□□ -1.44
SYNE2-221ENST00000556342 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
SYNE2-221ENST00000556342 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
SYNE2-221ENST00000556342 ERASQ7Z444 233 aa6.08□□□□□ -1.44
SYNE2-221ENST00000556342 CBLN2Q8IUK8 224 aa6.08□□□□□ -1.44
SYNE2-221ENST00000556342 M0R378 163 aa6.07□□□□□ -1.44
SYNE2-221ENST00000556342 ATP5LO75964 103 aa6.07□□□□□ -1.44
SYNE2-221ENST00000556342 VPREB1P12018 145 aa6.07□□□□□ -1.44
SYNE2-221ENST00000556342 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
SYNE2-221ENST00000556342 LINC00337Q8N6G1 96 aa6.07□□□□□ -1.44
SYNE2-221ENST00000556342 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
SYNE2-221ENST00000556342 GNB1LQ9BYB4 327 aa6.06□□□□□ -1.44
SYNE2-221ENST00000556342 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
SYNE2-221ENST00000556342 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
SYNE2-221ENST00000556342 PFN2P35080 140 aa6.05□□□□□ -1.44
SYNE2-221ENST00000556342 HIGD2AQ9BW72 106 aa6.05□□□□□ -1.44
SYNE2-221ENST00000556342 CST9LQ9H4G1 147 aa6.05□□□□□ -1.44
SYNE2-221ENST00000556342 SND1-IT1Q9HBX3 110 aa6.05□□□□□ -1.44
SYNE2-221ENST00000556342 MT-ND4LP03901 98 aa6.04□□□□□ -1.44
SYNE2-221ENST00000556342 RHEBQ15382 184 aa6.04□□□□□ -1.44
SYNE2-221ENST00000556342 SPRR4Q96PI1 79 aa6.04□□□□□ -1.44
SYNE2-221ENST00000556342 SMCO4Q9NRQ5 59 aa6.04□□□□□ -1.44
SYNE2-221ENST00000556342 H3BRM9 83 aa6.03□□□□□ -1.44
SYNE2-221ENST00000556342 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
SYNE2-221ENST00000556342 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
SYNE2-221ENST00000556342 Q8NDZ9 215 aa6.03□□□□□ -1.44
SYNE2-221ENST00000556342 IGLV5-39A0A0G2JS06 123 aa6.02□□□□□ -1.45
SYNE2-221ENST00000556342 LINC01549A6NIU2 74 aa6.02□□□□□ -1.45
SYNE2-221ENST00000556342 PMVKQ15126 192 aa6.02□□□□□ -1.45
SYNE2-221ENST00000556342 KIAA1644Q3SXP7 199 aa6.02□□□□□ -1.45
SYNE2-221ENST00000556342 Q8NBF4 154 aa6.02□□□□□ -1.45
SYNE2-221ENST00000556342 ERG28Q9UKR5 140 aa6.02□□□□□ -1.45
SYNE2-221ENST00000556342 DAND5Q8N907 189 aa6.01□□□□□ -1.45
SYNE2-221ENST00000556342 SPINK1P00995 79 aa6□□□□□ -1.45
SYNE2-221ENST00000556342 COX17Q14061 63 aa6□□□□□ -1.45
SYNE2-221ENST00000556342 RPS10P5Q9NQ39 176 aa6□□□□□ -1.45
SYNE2-221ENST00000556342 ZNF706Q9Y5V0 76 aaPredicted RBP6□□□□□ -1.45
SYNE2-221ENST00000556342 LINC01546A6NGU7 62 aa5.99□□□□□ -1.45
SYNE2-221ENST00000556342 IGLC3P0DOY3 106 aa5.99□□□□□ -1.45
SYNE2-221ENST00000556342 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-221ENST00000556342 ZNF22P17026 224 aaPredicted RBP5.98□□□□□ -1.45
SYNE2-221ENST00000556342 C5orf52A6NGY3 159 aa5.97□□□□□ -1.45
SYNE2-221ENST00000556342 LINC00518Q8N0U6 118 aa5.97□□□□□ -1.45
SYNE2-221ENST00000556342 SFTA2Q6UW10 78 aa5.96□□□□□ -1.46
SYNE2-221ENST00000556342 NDUFA12Q9UI09 145 aa5.96□□□□□ -1.46
SYNE2-221ENST00000556342 PRYO14603 147 aa5.95□□□□□ -1.46
SYNE2-221ENST00000556342 NDUFA6P56556 154 aa5.95□□□□□ -1.46
SYNE2-221ENST00000556342 FA2HQ7L5A8 372 aa5.95□□□□□ -1.46
SYNE2-221ENST00000556342 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
SYNE2-221ENST00000556342 SPRR1AP35321 89 aa5.94□□□□□ -1.46
SYNE2-221ENST00000556342 LINC00158P58513 81 aa5.94□□□□□ -1.46
SYNE2-221ENST00000556342 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
SYNE2-221ENST00000556342 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
SYNE2-221ENST00000556342 Q8N377 158 aa5.94□□□□□ -1.46
SYNE2-221ENST00000556342 FAM19A2Q8N3H0 131 aa5.94□□□□□ -1.46
SYNE2-221ENST00000556342 TRAV9-1A0A075B6T8 112 aa5.93□□□□□ -1.46
SYNE2-221ENST00000556342 C11orf86A6NJI1 115 aa5.93□□□□□ -1.46
SYNE2-221ENST00000556342 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-221ENST00000556342 A0A096LNJ9 63 aa5.92□□□□□ -1.46
SYNE2-221ENST00000556342 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
SYNE2-221ENST00000556342 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-221ENST00000556342 SNRPEP62304 92 aaKnown RBP5.92□□□□□ -1.46
SYNE2-221ENST00000556342 MOBPQ13875 183 aa5.92□□□□□ -1.46
SYNE2-221ENST00000556342 KCNQ1DNQ9H478 68 aa5.92□□□□□ -1.46
SYNE2-221ENST00000556342 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 NCR3O14931 201 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 SLC25A20O43772 301 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 MT1HP80294 61 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 TMEM170BQ5T4T1 132 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms