RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
ACTN1-217ENST00000556203 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
ACTN1-217ENST00000556203 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
ACTN1-217ENST00000556203 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
ACTN1-217ENST00000556203 LEPROTO15243 131 aa9.24□□□□□ -0.93
ACTN1-217ENST00000556203 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
ACTN1-217ENST00000556203 HERVK_113P61574 105 aa9.24□□□□□ -0.93
ACTN1-217ENST00000556203 HERV-K104P63124 156 aa9.24□□□□□ -0.93
ACTN1-217ENST00000556203 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
ACTN1-217ENST00000556203 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
ACTN1-217ENST00000556203 MYMXA0A1B0GTQ4 84 aa9.23□□□□□ -0.93
ACTN1-217ENST00000556203 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
ACTN1-217ENST00000556203 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
ACTN1-217ENST00000556203 VPREB1P12018 145 aa9.23□□□□□ -0.93
ACTN1-217ENST00000556203 S100A1P23297 94 aa9.23□□□□□ -0.93
ACTN1-217ENST00000556203 COA6Q5JTJ3 125 aaKnown RBP9.23□□□□□ -0.93
ACTN1-217ENST00000556203 H0Y9J4 135 aa9.22□□□□□ -0.93
ACTN1-217ENST00000556203 ATP6V1G1O75348 118 aa9.22□□□□□ -0.93
ACTN1-217ENST00000556203 RPL24P83731 157 aaKnown RBP9.22□□□□□ -0.93
ACTN1-217ENST00000556203 Q8NDZ9 215 aa9.22□□□□□ -0.93
ACTN1-217ENST00000556203 J3QQQ9 107 aa9.21□□□□□ -0.94
ACTN1-217ENST00000556203 LINC00587B1AMM8 73 aa9.2□□□□□ -0.94
ACTN1-217ENST00000556203 ZNF861PO60384 105 aa9.2□□□□□ -0.94
ACTN1-217ENST00000556203 BCE1O60756 84 aa9.2□□□□□ -0.94
ACTN1-217ENST00000556203 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
ACTN1-217ENST00000556203 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
ACTN1-217ENST00000556203 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
ACTN1-217ENST00000556203 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
ACTN1-217ENST00000556203 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
ACTN1-217ENST00000556203 TNXBP22105 4242 aa9.18□□□□□ -0.94
ACTN1-217ENST00000556203 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
ACTN1-217ENST00000556203 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
ACTN1-217ENST00000556203 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
ACTN1-217ENST00000556203 E9PLD3 99 aa9.17□□□□□ -0.94
ACTN1-217ENST00000556203 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
ACTN1-217ENST00000556203 NMUP48645 174 aa9.17□□□□□ -0.94
ACTN1-217ENST00000556203 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
ACTN1-217ENST00000556203 KRTDAPP60985 99 aa9.16□□□□□ -0.94
ACTN1-217ENST00000556203 BOD1L2Q8IYS8 172 aa9.16□□□□□ -0.94
ACTN1-217ENST00000556203 DAND5Q8N907 189 aa9.15□□□□□ -0.94
ACTN1-217ENST00000556203 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
ACTN1-217ENST00000556203 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
ACTN1-217ENST00000556203 UBE2AP49459 152 aa9.14□□□□□ -0.95
ACTN1-217ENST00000556203 HMCN2Q8NDA2 5059 aa9.14□□□□□ -0.95
ACTN1-217ENST00000556203 M0R378 163 aa9.13□□□□□ -0.95
ACTN1-217ENST00000556203 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
ACTN1-217ENST00000556203 NCR3O14931 201 aa9.12□□□□□ -0.95
ACTN1-217ENST00000556203 KRTAP13-1Q8IUC0 172 aa9.12□□□□□ -0.95
ACTN1-217ENST00000556203 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
ACTN1-217ENST00000556203 A0A0J9YXY3 114 aa9.11□□□□□ -0.95
ACTN1-217ENST00000556203 C20orf202A1L168 122 aa9.11□□□□□ -0.95
ACTN1-217ENST00000556203 PRLHP81277 87 aa9.1□□□□□ -0.95
ACTN1-217ENST00000556203 FAM19A1Q7Z5A9 133 aa9.1□□□□□ -0.95
ACTN1-217ENST00000556203 IGKV2D-26A0A0A0MRZ7 120 aa9.09□□□□□ -0.95
ACTN1-217ENST00000556203 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
ACTN1-217ENST00000556203 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
ACTN1-217ENST00000556203 ADAMTSL4-AS1Q5T5F5 129 aa9.08□□□□□ -0.96
ACTN1-217ENST00000556203 MIEN1Q9BRT3 115 aa9.08□□□□□ -0.96
ACTN1-217ENST00000556203 HIST3H2BBQ8N257 126 aa9.07□□□□□ -0.96
ACTN1-217ENST00000556203 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
ACTN1-217ENST00000556203 NPC2P61916 151 aa9.06□□□□□ -0.96
ACTN1-217ENST00000556203 ATOH7Q8N100 152 aa9.06□□□□□ -0.96
ACTN1-217ENST00000556203 TTTY13Q9BZ97 58 aa9.06□□□□□ -0.96
ACTN1-217ENST00000556203 TRBV10-3A0A0K0K1G6 114 aa9.05□□□□□ -0.96
ACTN1-217ENST00000556203 PRYO14603 147 aa9.05□□□□□ -0.96
ACTN1-217ENST00000556203 S100A2P29034 98 aa9.05□□□□□ -0.96
ACTN1-217ENST00000556203 RPL13AP40429 203 aaKnown RBP9.05□□□□□ -0.96
ACTN1-217ENST00000556203 SOSTDC1Q6X4U4 206 aa9.05□□□□□ -0.96
ACTN1-217ENST00000556203 HIST1H2BLQ99880 126 aa9.05□□□□□ -0.96
ACTN1-217ENST00000556203 KCNQ1DNQ9H478 68 aa9.05□□□□□ -0.96
ACTN1-217ENST00000556203 S100A6P06703 90 aa9.04□□□□□ -0.96
ACTN1-217ENST00000556203 LITAFQ99732 161 aa9.04□□□□□ -0.96
ACTN1-217ENST00000556203 SPANXB1Q9NS25 103 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-217ENST00000556203 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
ACTN1-217ENST00000556203 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-217ENST00000556203 TIMM17BO60830 172 aa9.03□□□□□ -0.96
ACTN1-217ENST00000556203 NDUFC2O95298 119 aa9.03□□□□□ -0.96
ACTN1-217ENST00000556203 AKR1D1P51857 326 aa9.03□□□□□ -0.96
ACTN1-217ENST00000556203 ANKRD39Q53RE8 183 aa9.03□□□□□ -0.96
ACTN1-217ENST00000556203 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
ACTN1-217ENST00000556203 DDTP30046 118 aa9.02□□□□□ -0.97
ACTN1-217ENST00000556203 SPRR1AP35321 89 aa9.02□□□□□ -0.97
ACTN1-217ENST00000556203 HIGD2AQ9BW72 106 aa9.02□□□□□ -0.97
ACTN1-217ENST00000556203 A0A087X002 238 aa9.01□□□□□ -0.97
ACTN1-217ENST00000556203 CRYGAP11844 174 aa9.01□□□□□ -0.97
ACTN1-217ENST00000556203 S100A12P80511 92 aa9.01□□□□□ -0.97
ACTN1-217ENST00000556203 LINC00337Q8N6G1 96 aa9.01□□□□□ -0.97
ACTN1-217ENST00000556203 LINC00308Q8TCZ7 52 aa9.01□□□□□ -0.97
ACTN1-217ENST00000556203 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
ACTN1-217ENST00000556203 S100A7L2Q5SY68 101 aa9□□□□□ -0.97
ACTN1-217ENST00000556203 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
ACTN1-217ENST00000556203 KRTAP4-16G5E9R7 235 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-217ENST00000556203 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
ACTN1-217ENST00000556203 SNRPEP62304 92 aaKnown RBP8.98□□□□□ -0.97
ACTN1-217ENST00000556203 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
ACTN1-217ENST00000556203 PCP2Q8IVA1 136 aa8.97□□□□□ -0.97
ACTN1-217ENST00000556203 TYMSOSQ8TAI1 123 aa8.97□□□□□ -0.97
ACTN1-217ENST00000556203 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
ACTN1-217ENST00000556203 TRAV23DV6A0A075B6W5 121 aa8.95□□□□□ -0.98
ACTN1-217ENST00000556203 B5MCH6 92 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms