RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 FXYD2P54710 66 aa7.26□□□□□ -1.25
GABRB3-210ENST00000556166 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
GABRB3-210ENST00000556166 SCXQ7RTU7 201 aa7.26□□□□□ -1.25
GABRB3-210ENST00000556166 KRTAP7-1Q8IUC3 87 aa7.26□□□□□ -1.25
GABRB3-210ENST00000556166 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
GABRB3-210ENST00000556166 A0A087WYN8 130 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 A0A1W2PNN7 141 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 CDK2AP2O75956 126 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 TAL2Q16559 108 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 CEND1Q8N111 149 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 SPANXB1Q9NS25 103 aaPredicted RBP7.25□□□□□ -1.25
GABRB3-210ENST00000556166 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 HERV-K104P63124 156 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
GABRB3-210ENST00000556166 SFTA2Q6UW10 78 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 DPH3Q96FX2 82 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 LITAFQ99732 161 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 XAGE1AQ9HD64 81 aa7.25□□□□□ -1.25
GABRB3-210ENST00000556166 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
GABRB3-210ENST00000556166 PLAC8Q9NZF1 115 aa7.24□□□□□ -1.25
GABRB3-210ENST00000556166 LINC00474Q9P2X8 69 aa7.24□□□□□ -1.25
GABRB3-210ENST00000556166 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 LINC00158P58513 81 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 COX17Q14061 63 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 LBHQ53QV2 105 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-210ENST00000556166 COL5A1-AS1Q5SY13 56 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 ADAMTSL4-AS1Q5T5F5 129 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 PKIGQ9Y2B9 76 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 HSPG2P98160 4391 aa7.23□□□□□ -1.25
GABRB3-210ENST00000556166 MEIG1Q5JSS6 88 aa7.22□□□□□ -1.25
GABRB3-210ENST00000556166 DAND5Q8N907 189 aa7.21□□□□□ -1.25
GABRB3-210ENST00000556166 Q8NDZ9 215 aa7.21□□□□□ -1.25
GABRB3-210ENST00000556166 TIMM17BO60830 172 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-210ENST00000556166 NPC2P61916 151 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 SERTAD4-AS1Q5TG53 156 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 Q6ZVH6 145 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 MIR7-3HGQ8N6C7 128 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 SPANXDQ9BXN6 97 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 NHP2Q9NX24 153 aaKnown RBP7.2□□□□□ -1.26
GABRB3-210ENST00000556166 SPANXCQ9NY87 97 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 A0A1B0GV90 55 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 A6NDN8 102 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 K7ERJ3 54 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-210ENST00000556166 MUSTN1Q8IVN3 82 aa7.2□□□□□ -1.26
GABRB3-210ENST00000556166 TAX1BP3O14907 124 aa7.19□□□□□ -1.26
GABRB3-210ENST00000556166 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
GABRB3-210ENST00000556166 HERC2O95714 4834 aa7.17□□□□□ -1.26
GABRB3-210ENST00000556166 SOSTDC1Q6X4U4 206 aa7.17□□□□□ -1.26
GABRB3-210ENST00000556166 PHF5AQ7RTV0 110 aaKnown RBP7.17□□□□□ -1.26
GABRB3-210ENST00000556166 RAB37Q96AX2 223 aa7.17□□□□□ -1.26
GABRB3-210ENST00000556166 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
GABRB3-210ENST00000556166 FAT1Q14517 4588 aa7.17□□□□□ -1.26
GABRB3-210ENST00000556166 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 A4D1N5 150 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 A6NJY4 79 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 VPREB1P12018 145 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 PRR3P79522 188 aaKnown RBP7.16□□□□□ -1.26
GABRB3-210ENST00000556166 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 A0A1B0GWB2 263 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 RPL24P83731 157 aaKnown RBP7.16□□□□□ -1.26
GABRB3-210ENST00000556166 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 C22orf24Q9Y442 160 aa7.16□□□□□ -1.26
GABRB3-210ENST00000556166 IGLV5-37A0A075B6J1 123 aa7.15□□□□□ -1.27
GABRB3-210ENST00000556166 IFITM1P13164 125 aa7.15□□□□□ -1.27
GABRB3-210ENST00000556166 NAA38Q9BRA0 125 aaKnown RBP7.15□□□□□ -1.27
GABRB3-210ENST00000556166 M0QXV9 152 aa7.14□□□□□ -1.27
GABRB3-210ENST00000556166 CFC1BP0CG36 223 aa7.14□□□□□ -1.27
GABRB3-210ENST00000556166 CFC1P0CG37 223 aa7.14□□□□□ -1.27
GABRB3-210ENST00000556166 LINC00528Q8N1L1 170 aa7.14□□□□□ -1.27
GABRB3-210ENST00000556166 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
GABRB3-210ENST00000556166 Q8N1X5 172 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 LINC00167Q96N53 147 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 GAGE10A6NGK3 116 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 C9orf118A6NHY6 69 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 H3BUT2 72 aa7.12□□□□□ -1.27
GABRB3-210ENST00000556166 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
GABRB3-210ENST00000556166 MRPL55Q7Z7F7 128 aaKnown RBP7.11□□□□□ -1.27
GABRB3-210ENST00000556166 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
GABRB3-210ENST00000556166 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
GABRB3-210ENST00000556166 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.27
GABRB3-210ENST00000556166 NCR3O14931 201 aa7.09□□□□□ -1.27
GABRB3-210ENST00000556166 TSPAN13O95857 204 aa7.09□□□□□ -1.27
GABRB3-210ENST00000556166 Q5VSD8 79 aa7.09□□□□□ -1.27
GABRB3-210ENST00000556166 NKAPP1Q8N9T2 125 aa7.09□□□□□ -1.27
GABRB3-210ENST00000556166 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
GABRB3-210ENST00000556166 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
GABRB3-210ENST00000556166 M0R378 163 aa7.08□□□□□ -1.28
GABRB3-210ENST00000556166 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
GABRB3-210ENST00000556166 PSORS1C2Q9UIG4 136 aa7.08□□□□□ -1.28
GABRB3-210ENST00000556166 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
GABRB3-210ENST00000556166 IGKV2-28A0A075B6P5 120 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms