RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
VPS33B-205ENST00000556096 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
VPS33B-205ENST00000556096 MTURNQ8N3F0 131 aa9.7□□□□□ -0.86
VPS33B-205ENST00000556096 OCIAD2Q56VL3 154 aa9.69□□□□□ -0.86
VPS33B-205ENST00000556096 M0QXV9 152 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 SYCNQ0VAF6 134 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 OR13C6PQ8NH95 151 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 SMIM11BQ8TCY0 68 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 CLEC2BQ92478 149 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 RNF151Q2KHN1 245 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
VPS33B-205ENST00000556096 C9JAW5 83 aa9.67□□□□□ -0.86
VPS33B-205ENST00000556096 USP17L23D6RBM5 183 aa9.67□□□□□ -0.86
VPS33B-205ENST00000556096 NDUFC2-KCTD14E9PQ53 114 aa9.67□□□□□ -0.86
VPS33B-205ENST00000556096 TMEM126AQ9H061 195 aa9.67□□□□□ -0.86
VPS33B-205ENST00000556096 SLC25A20O43772 301 aa9.66□□□□□ -0.86
VPS33B-205ENST00000556096 PRR3P79522 188 aaKnown RBP9.66□□□□□ -0.86
VPS33B-205ENST00000556096 Q8NDZ9 215 aa9.66□□□□□ -0.86
VPS33B-205ENST00000556096 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
VPS33B-205ENST00000556096 ETDBQ3ZM63 59 aa9.65□□□□□ -0.86
VPS33B-205ENST00000556096 KRTAP1-5Q9BYS1 174 aa9.65□□□□□ -0.86
VPS33B-205ENST00000556096 H0YGX0 51 aa9.65□□□□□ -0.87
VPS33B-205ENST00000556096 K7ERU9 68 aa9.65□□□□□ -0.87
VPS33B-205ENST00000556096 DNAH1Q9P2D7 4330 aa9.64□□□□□ -0.87
VPS33B-205ENST00000556096 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
VPS33B-205ENST00000556096 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
VPS33B-205ENST00000556096 TRACP01848 142 aa9.63□□□□□ -0.87
VPS33B-205ENST00000556096 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
VPS33B-205ENST00000556096 ANKRD29Q8N6D5 301 aa9.63□□□□□ -0.87
VPS33B-205ENST00000556096 XAGE1AQ9HD64 81 aa9.63□□□□□ -0.87
VPS33B-205ENST00000556096 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
VPS33B-205ENST00000556096 NCR3O14931 201 aa9.62□□□□□ -0.87
VPS33B-205ENST00000556096 SACSQ9NZJ4 4579 aa9.62□□□□□ -0.87
VPS33B-205ENST00000556096 H3BT86 120 aa9.62□□□□□ -0.87
VPS33B-205ENST00000556096 SLPIP03973 132 aa9.62□□□□□ -0.87
VPS33B-205ENST00000556096 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
VPS33B-205ENST00000556096 TEN1Q86WV5 123 aa9.62□□□□□ -0.87
VPS33B-205ENST00000556096 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
VPS33B-205ENST00000556096 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
VPS33B-205ENST00000556096 Q6ZRP5 223 aa9.61□□□□□ -0.87
VPS33B-205ENST00000556096 FAM218AQ96MZ4 157 aa9.6□□□□□ -0.87
VPS33B-205ENST00000556096 LY6G6CO95867 125 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 VPREB1P12018 145 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 HYDINQ4G0P3 5121 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
VPS33B-205ENST00000556096 GAGE2EQ4V326 116 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.87
VPS33B-205ENST00000556096 J3QR89 54 aa9.57□□□□□ -0.88
VPS33B-205ENST00000556096 LECT2O14960 151 aa9.57□□□□□ -0.88
VPS33B-205ENST00000556096 PSCAO43653 123 aa9.57□□□□□ -0.88
VPS33B-205ENST00000556096 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
VPS33B-205ENST00000556096 LINC00476Q8WZB0 136 aa9.56□□□□□ -0.88
VPS33B-205ENST00000556096 M0R378 163 aa9.56□□□□□ -0.88
VPS33B-205ENST00000556096 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
VPS33B-205ENST00000556096 A0A087WYN8 130 aa9.55□□□□□ -0.88
VPS33B-205ENST00000556096 A0A1B0GX51 115 aa9.55□□□□□ -0.88
VPS33B-205ENST00000556096 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
VPS33B-205ENST00000556096 PLA2G2DQ9UNK4 145 aa9.55□□□□□ -0.88
VPS33B-205ENST00000556096 KMT2AQ03164 3969 aa9.54□□□□□ -0.88
VPS33B-205ENST00000556096 TRBV10-3A0A0K0K1G6 114 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 CNBPP62633 177 aaKnown RBP9.53□□□□□ -0.88
VPS33B-205ENST00000556096 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 RYR2Q92736 4967 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 LCE6AA0A183 80 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 DNAL4O96015 105 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
VPS33B-205ENST00000556096 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
VPS33B-205ENST00000556096 RYR3Q15413 4870 aa9.52□□□□□ -0.89
VPS33B-205ENST00000556096 TRAV23DV6A0A075B6W5 121 aa9.51□□□□□ -0.89
VPS33B-205ENST00000556096 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
VPS33B-205ENST00000556096 LINC00167Q96N53 147 aa9.51□□□□□ -0.89
VPS33B-205ENST00000556096 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
VPS33B-205ENST00000556096 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
VPS33B-205ENST00000556096 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
VPS33B-205ENST00000556096 SNCGO76070 127 aa9.49□□□□□ -0.89
VPS33B-205ENST00000556096 Q8N814 137 aa9.49□□□□□ -0.89
VPS33B-205ENST00000556096 M0R2N4 97 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 DNAH10Q8IVF4 4471 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
VPS33B-205ENST00000556096 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
VPS33B-205ENST00000556096 VPS25Q9BRG1 176 aa9.47□□□□□ -0.89
VPS33B-205ENST00000556096 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
VPS33B-205ENST00000556096 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.89
VPS33B-205ENST00000556096 Q6ZR54 194 aa9.45□□□□□ -0.9
VPS33B-205ENST00000556096 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
VPS33B-205ENST00000556096 ORMDL1Q9P0S3 153 aa9.45□□□□□ -0.9
VPS33B-205ENST00000556096 hADV29S1A0JD25 119 aa9.45□□□□□ -0.9
VPS33B-205ENST00000556096 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
VPS33B-205ENST00000556096 DNAH2Q9P225 4427 aa9.44□□□□□ -0.9
VPS33B-205ENST00000556096 C16orf90A8MZG2 172 aa9.44□□□□□ -0.9
VPS33B-205ENST00000556096 COX7BP24311 80 aa9.44□□□□□ -0.9
VPS33B-205ENST00000556096 ELOF1P60002 83 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms