RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 C9orf129Q5T035 196 aaKnown RBP4.83□□□□□ -1.64
TDP1-214ENST00000556063 FAM19A5Q7Z5A7 132 aaPredicted RBP4.83□□□□□ -1.64
TDP1-214ENST00000556063 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 COPS9Q8WXC6 57 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 PLA2G2DQ9UNK4 145 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 PAM16Q9Y3D7 125 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 FAM229AH3BQW9 127 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 HAMPP81172 84 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 SPATA45Q537H7 98 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 PYY3Q5JQD4 70 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 Q6ZVH6 145 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 PCP2Q8IVA1 136 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 TTTY13Q9BZ97 58 aa4.82□□□□□ -1.64
TDP1-214ENST00000556063 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 EPM2AB3EWF7 344 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 M0QXV9 152 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
TDP1-214ENST00000556063 COX8AP10176 69 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 BOD1L2Q8IYS8 172 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
TDP1-214ENST00000556063 FAT2Q9NYQ8 4349 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 IGLV5-37A0A075B6J1 123 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 LOC107984156A0A0G2JMH3 177 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 DLEU1O43261 78 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
TDP1-214ENST00000556063 IFITM1P13164 125 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 UBE2BP63146 152 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 SERTAD4-AS1Q5TG53 156 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 MRPL55Q7Z7F7 128 aaKnown RBP4.8□□□□□ -1.64
TDP1-214ENST00000556063 ARL17AQ8IVW1 177 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 DAND5Q8N907 189 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 C22orf24Q9Y442 160 aa4.8□□□□□ -1.64
TDP1-214ENST00000556063 A6NJY4 79 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 VPREB1P12018 145 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
TDP1-214ENST00000556063 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 PHF5AQ7RTV0 110 aaKnown RBP4.79□□□□□ -1.64
TDP1-214ENST00000556063 Q8N1X5 172 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 C14orf144Q96I85 54 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 SPANXDQ9BXN6 97 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 SPANXCQ9NY87 97 aa4.79□□□□□ -1.64
TDP1-214ENST00000556063 M0R378 163 aa4.78□□□□□ -1.64
TDP1-214ENST00000556063 NDUFC2O95298 119 aa4.78□□□□□ -1.64
TDP1-214ENST00000556063 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
TDP1-214ENST00000556063 RPL37AP61513 92 aaKnown RBP4.78□□□□□ -1.64
TDP1-214ENST00000556063 LINC00308Q8TCZ7 52 aa4.78□□□□□ -1.64
TDP1-214ENST00000556063 LITAFQ99732 161 aa4.78□□□□□ -1.64
TDP1-214ENST00000556063 PPDPFQ9H3Y8 114 aa4.78□□□□□ -1.64
TDP1-214ENST00000556063 TRBV10-2A0A0K0K1G8 114 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 NPC2P61916 151 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 Q5VSD8 79 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 KRTAP7-1Q8IUC3 87 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 LINC00518Q8N0U6 118 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
TDP1-214ENST00000556063 CBY1Q9Y3M2 126 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 PKD1P98161 4303 aa4.77□□□□□ -1.65
TDP1-214ENST00000556063 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
TDP1-214ENST00000556063 C4orf48Q5BLP8 95 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 S100A7L2Q5SY68 101 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 SOSTDC1Q6X4U4 206 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 LINC00167Q96N53 147 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 HIST1H4GQ99525 98 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 HIGD1BQ9P298 99 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 HECTD4Q9Y4D8 3996 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 DNAH11Q96DT5 4516 aa4.76□□□□□ -1.65
TDP1-214ENST00000556063 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
TDP1-214ENST00000556063 TMEM238LA0A1B0GVL6 79 aa4.75□□□□□ -1.65
TDP1-214ENST00000556063 NCR3O14931 201 aa4.75□□□□□ -1.65
TDP1-214ENST00000556063 MUSTN1Q8IVN3 82 aa4.75□□□□□ -1.65
TDP1-214ENST00000556063 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
TDP1-214ENST00000556063 IGLV1-50A0A075B6I6 118 aa4.74□□□□□ -1.65
TDP1-214ENST00000556063 RPL37AP8A6NKH3 93 aa4.74□□□□□ -1.65
TDP1-214ENST00000556063 PRR3P79522 188 aaKnown RBP4.74□□□□□ -1.65
TDP1-214ENST00000556063 TAL2Q16559 108 aa4.74□□□□□ -1.65
TDP1-214ENST00000556063 C1orf137Q5JT78 98 aa4.74□□□□□ -1.65
TDP1-214ENST00000556063 PSORS1C2Q9UIG4 136 aa4.74□□□□□ -1.65
TDP1-214ENST00000556063 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
TDP1-214ENST00000556063 IGKV2-28A0A075B6P5 120 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 TRBV10-3A0A0K0K1G6 114 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 PRYO14603 147 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 EIF4EBP3O60516 100 aaPredicted RBP4.73□□□□□ -1.65
TDP1-214ENST00000556063 IGKV2D-28P01615 120 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 DDTP30046 118 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 Q8NDZ9 215 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 OR13C6PQ8NH95 151 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 TMEM126AQ9H061 195 aa4.73□□□□□ -1.65
TDP1-214ENST00000556063 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
TDP1-214ENST00000556063 BCE1O60756 84 aa4.72□□□□□ -1.65
TDP1-214ENST00000556063 C2orf91Q6ZV80 131 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms