RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 YPEL1O60688 119 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 HMGN2P05204 90 aaKnown RBP0.29□□□□□ -2.36
NEK9-208ENST00000555961 MT1BP07438 61 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 CD14P08571 375 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 ZNF137PP52743 207 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 SPINK7P58062 85 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 PCBD1P61457 104 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 NEDD8Q15843 81 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 SMIM21Q3B7S5 101 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 TMEM128Q5BJH2 165 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 GLYATL3Q5SZD4 288 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 C10orf128Q5T292 105 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 SAMD13Q5VXD3 122 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 PPP1R2P3Q6NXS1 205 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 HEPN1Q6WQI6 88 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 OR8J3Q8NGG0 315 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 ATP6V0E2Q8NHE4 81 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 CLEC2BQ92478 149 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 DMAC1Q96GE9 116 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 USMG5Q96IX5 58 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 CARD19Q96LW7 228 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 SDF2Q99470 211 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 SMIM7Q9BQ49 75 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 RABAC1Q9UI14 185 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 NOP16Q9Y3C1 178 aaKnown RBP0.29□□□□□ -2.36
NEK9-208ENST00000555961 BORCS7-ASMTA0A0B4J1R7 106 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 A0A0D9SG42 100 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 FAM223BA6NKX1 122 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 TMEM14DPA8MWL7 114 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 H3BNG1 76 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 K7EP13 123 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 NDUFA3O95167 84 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 HBDP02042 147 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 FABP1P07148 127 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 G0S2P27469 103 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 GUCA1AP43080 201 aaPredicted RBP0.28□□□□□ -2.36
NEK9-208ENST00000555961 GTF2A1P52655 376 aaPredicted RBP0.28□□□□□ -2.36
NEK9-208ENST00000555961 DEFB1P60022 68 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 COPZ1P61923 177 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 FXYD3Q14802 87 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 RHOHQ15669 191 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 LINC01556Q5JQF7 62 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 PSMG4Q5JS54 123 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 FAM223AQ8IWN6 122 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 VSTM2AQ8TAG5 236 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 PPDPFLQ8WWR9 84 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 RHPN1-AS1Q9BWJ2 59 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 DPY30Q9C005 99 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 SLC35B3Q9H1N7 401 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 NOP10Q9NPE3 64 aaKnown RBP0.28□□□□□ -2.36
NEK9-208ENST00000555961 METTL1Q9UBP6 276 aaKnown RBP0.28□□□□□ -2.36
NEK9-208ENST00000555961 UBE2D4Q9Y2X8 147 aa0.28□□□□□ -2.36
NEK9-208ENST00000555961 LOC107984640A0A0U1RRK4 108 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 A0A1B0GWA3 101 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 A0A1B0GX51 115 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 TMEM30CPA0ZSE6 113 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 C9orf92A6NGG3 77 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 APOC4-APOC2K7ER74 178 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 M0R135 149 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 APOC2P02655 101 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 HTN1P15515 57 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 HIST1H1BP16401 226 aaKnown RBP0.27□□□□□ -2.37
NEK9-208ENST00000555961 S100GP29377 79 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 SNRPD3P62318 126 aaKnown RBP0.27□□□□□ -2.37
NEK9-208ENST00000555961 QRFPP83859 136 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 COX6A2Q02221 97 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 Q5VV11 94 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 IDO2Q6ZQW0 420 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 OR51A4Q8NGJ6 313 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 PLAC4Q8WY50 150 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 RERGLQ9H628 205 aa0.27□□□□□ -2.37
NEK9-208ENST00000555961 TIMM8BQ9Y5J9 83 aaPredicted RBP0.27□□□□□ -2.37
NEK9-208ENST00000555961 TRAV12-2A0A075B6T6 113 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 A0A096LNI7 61 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 TEX49A0A1B0GTD5 131 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 C20orf202A1L168 122 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 J3KT08 172 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 M0R2Z0 102 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 TPST1O60507 370 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 EDF1O60869 148 aaKnown RBP0.26□□□□□ -2.37
NEK9-208ENST00000555961 DPM2O94777 84 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 OR2H2O95918 312 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 APOC1P02654 83 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 DBIP07108 87 aaKnown RBP0.26□□□□□ -2.37
NEK9-208ENST00000555961 IFI6P09912 130 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 SAA2P0DJI9 122 aaPredicted RBP0.26□□□□□ -2.37
NEK9-208ENST00000555961 SLC25A4P12235 298 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 HLA-DRB4P13762 266 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 CKS2P33552 79 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 RPS27P42677 84 aaKnown RBP0.26□□□□□ -2.37
NEK9-208ENST00000555961 UBE2D3P61077 147 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 KLKP1Q107X0 134 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 TSKUQ8WUA8 353 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 SPTSSAQ969W0 71 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 TTTY10Q9BZA0 68 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 ATG5Q9H1Y0 275 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 TAF9BQ9HBM6 251 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 MRPL36Q9P0J6 103 aaKnown RBP0.26□□□□□ -2.37
NEK9-208ENST00000555961 HLA-DRB4X5D2U9 266 aa0.26□□□□□ -2.37
NEK9-208ENST00000555961 TRGV1A0A0A0MS02 117 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms