RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 AKR1D1P51857 326 aa14.1□□□□□ -0.15
CDKN3-208ENST00000555837 SRSF9Q13242 221 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDKN3-208ENST00000555837 PET117Q6UWS5 81 aa14.1□□□□□ -0.15
CDKN3-208ENST00000555837 KRTAP7-1Q8IUC3 87 aa14.1□□□□□ -0.15
CDKN3-208ENST00000555837 DIRC1Q969H9 104 aa14.1□□□□□ -0.15
CDKN3-208ENST00000555837 SND1-IT1Q9HBX3 110 aa14.1□□□□□ -0.15
CDKN3-208ENST00000555837 LGALS3P17931 250 aaKnown RBP14.08□□□□□ -0.16
CDKN3-208ENST00000555837 MYCBP2O75592 4640 aa14.08□□□□□ -0.16
CDKN3-208ENST00000555837 J3QQQ9 107 aa14.06□□□□□ -0.16
CDKN3-208ENST00000555837 C20orf202A1L168 122 aa14.05□□□□□ -0.16
CDKN3-208ENST00000555837 LINC00167Q96N53 147 aa14.04□□□□□ -0.16
CDKN3-208ENST00000555837 PMCHL2Q9BQD1 86 aa14.04□□□□□ -0.16
CDKN3-208ENST00000555837 LINC01545Q5VT33 79 aa14.02□□□□□ -0.17
CDKN3-208ENST00000555837 LINC01600Q96MT4 127 aa14.02□□□□□ -0.17
CDKN3-208ENST00000555837 SMIM13P0DJ93 91 aa14.01□□□□□ -0.17
CDKN3-208ENST00000555837 E9PLD3 99 aa14□□□□□ -0.17
CDKN3-208ENST00000555837 RPL28P46779 137 aaKnown RBP14□□□□□ -0.17
CDKN3-208ENST00000555837 VPREB1P12018 145 aa13.99□□□□□ -0.17
CDKN3-208ENST00000555837 A0A0U1RRA0 63 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 ZNF861PO60384 105 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 BCE1O60756 84 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 KRTDAPP60985 99 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 MIR7-3HGQ8N6C7 128 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 MIEN1Q9BRT3 115 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 PKHD1L1Q86WI1 4243 aa13.98□□□□□ -0.17
CDKN3-208ENST00000555837 GAGE10A6NGK3 116 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 RPL37AP8A6NKH3 93 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 H0Y9J4 135 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 S100A6P06703 90 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 C3orf79P0CE67 100 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 S100A12P80511 92 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 KRTAP11-1Q8IUC1 163 aa13.97□□□□□ -0.17
CDKN3-208ENST00000555837 S100A2P29034 98 aa13.96□□□□□ -0.17
CDKN3-208ENST00000555837 IGKV2D-26A0A0A0MRZ7 120 aa13.95□□□□□ -0.18
CDKN3-208ENST00000555837 M0R378 163 aa13.95□□□□□ -0.18
CDKN3-208ENST00000555837 BOD1L2Q8IYS8 172 aa13.95□□□□□ -0.18
CDKN3-208ENST00000555837 IGLV1-50A0A075B6I6 118 aa13.93□□□□□ -0.18
CDKN3-208ENST00000555837 TSPEAR-AS2P59090 65 aa13.93□□□□□ -0.18
CDKN3-208ENST00000555837 UBE2AP49459 152 aa13.92□□□□□ -0.18
CDKN3-208ENST00000555837 IGKV2-28A0A075B6P5 120 aa13.91□□□□□ -0.18
CDKN3-208ENST00000555837 IGKV2D-28P01615 120 aa13.91□□□□□ -0.18
CDKN3-208ENST00000555837 LOC107984156A0A0G2JMH3 177 aa13.89□□□□□ -0.19
CDKN3-208ENST00000555837 SNRPEP62304 92 aaKnown RBP13.89□□□□□ -0.19
CDKN3-208ENST00000555837 ARL17AQ8IVW1 177 aa13.89□□□□□ -0.19
CDKN3-208ENST00000555837 MT1HL1P0DM35 61 aa13.87□□□□□ -0.19
CDKN3-208ENST00000555837 A0A0J9YXY3 114 aa13.86□□□□□ -0.19
CDKN3-208ENST00000555837 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
CDKN3-208ENST00000555837 TMEM126AQ9H061 195 aa13.86□□□□□ -0.19
CDKN3-208ENST00000555837 TRBV10-2A0A0K0K1G8 114 aa13.85□□□□□ -0.19
CDKN3-208ENST00000555837 TIMM17BO60830 172 aa13.85□□□□□ -0.19
CDKN3-208ENST00000555837 CBY1Q9Y3M2 126 aa13.85□□□□□ -0.19
CDKN3-208ENST00000555837 LRP1Q07954 4544 aaKnown RBP13.85□□□□□ -0.19
CDKN3-208ENST00000555837 FAT3Q8TDW7 4589 aa13.84□□□□□ -0.19
CDKN3-208ENST00000555837 ZNF815PA8K554 130 aa13.84□□□□□ -0.19
CDKN3-208ENST00000555837 NDUFC2O95298 119 aa13.84□□□□□ -0.19
CDKN3-208ENST00000555837 PRYO14603 147 aa13.83□□□□□ -0.2
CDKN3-208ENST00000555837 KRTAP10-8P60410 259 aa13.83□□□□□ -0.2
CDKN3-208ENST00000555837 FAM19A1Q7Z5A9 133 aa13.83□□□□□ -0.2
CDKN3-208ENST00000555837 HIST3H2BBQ8N257 126 aa13.83□□□□□ -0.2
CDKN3-208ENST00000555837 COPS9Q8WXC6 57 aa13.83□□□□□ -0.2
CDKN3-208ENST00000555837 SPANXB1Q9NS25 103 aaPredicted RBP13.83□□□□□ -0.2
CDKN3-208ENST00000555837 DAND5Q8N907 189 aa13.81□□□□□ -0.2
CDKN3-208ENST00000555837 HSBP1L1C9JCN9 74 aa13.8□□□□□ -0.2
CDKN3-208ENST00000555837 NCR3O14931 201 aa13.8□□□□□ -0.2
CDKN3-208ENST00000555837 HIST1H2BLQ99880 126 aa13.8□□□□□ -0.2
CDKN3-208ENST00000555837 SCGB1D4Q6XE38 83 aa13.79□□□□□ -0.2
CDKN3-208ENST00000555837 Q8NDZ9 215 aa13.79□□□□□ -0.2
CDKN3-208ENST00000555837 HERC1Q15751 4861 aa13.79□□□□□ -0.2
CDKN3-208ENST00000555837 S100A7L2Q5SY68 101 aa13.78□□□□□ -0.2
CDKN3-208ENST00000555837 KCNQ1DNQ9H478 68 aa13.78□□□□□ -0.2
CDKN3-208ENST00000555837 TMEM238C9JI98 176 aa13.77□□□□□ -0.21
CDKN3-208ENST00000555837 KRTAP13-1Q8IUC0 172 aa13.76□□□□□ -0.21
CDKN3-208ENST00000555837 LINC00337Q8N6G1 96 aa13.76□□□□□ -0.21
CDKN3-208ENST00000555837 DDTP30046 118 aa13.75□□□□□ -0.21
CDKN3-208ENST00000555837 ETDCA0A1B0GVM5 59 aa13.74□□□□□ -0.21
CDKN3-208ENST00000555837 KRTAP1-4P0C5Y4 121 aa13.74□□□□□ -0.21
CDKN3-208ENST00000555837 Q6ZVH6 145 aa13.74□□□□□ -0.21
CDKN3-208ENST00000555837 SPANXCQ9NY87 97 aa13.74□□□□□ -0.21
CDKN3-208ENST00000555837 TRBV10-3A0A0K0K1G6 114 aa13.73□□□□□ -0.21
CDKN3-208ENST00000555837 CRYGAP11844 174 aa13.73□□□□□ -0.21
CDKN3-208ENST00000555837 ADAMTSL4-AS1Q5T5F5 129 aa13.73□□□□□ -0.21
CDKN3-208ENST00000555837 PRR26Q8N8Z3 221 aa13.73□□□□□ -0.21
CDKN3-208ENST00000555837 PRLHP81277 87 aa13.72□□□□□ -0.21
CDKN3-208ENST00000555837 LINC00518Q8N0U6 118 aa13.72□□□□□ -0.21
CDKN3-208ENST00000555837 ATOH7Q8N100 152 aa13.72□□□□□ -0.21
CDKN3-208ENST00000555837 ZNF706Q9Y5V0 76 aaPredicted RBP13.72□□□□□ -0.21
CDKN3-208ENST00000555837 LINC00308Q8TCZ7 52 aa13.71□□□□□ -0.21
CDKN3-208ENST00000555837 SPRR1AP35321 89 aa13.7□□□□□ -0.22
CDKN3-208ENST00000555837 HINT1P49773 126 aaPredicted RBP13.7□□□□□ -0.22
CDKN3-208ENST00000555837 FAM229BQ4G0N7 80 aa13.7□□□□□ -0.22
CDKN3-208ENST00000555837 IFITM1P13164 125 aa13.69□□□□□ -0.22
CDKN3-208ENST00000555837 NPC2P61916 151 aa13.69□□□□□ -0.22
CDKN3-208ENST00000555837 ANKRD39Q53RE8 183 aa13.69□□□□□ -0.22
CDKN3-208ENST00000555837 LITAFQ99732 161 aa13.69□□□□□ -0.22
CDKN3-208ENST00000555837 HIGD2AQ9BW72 106 aa13.69□□□□□ -0.22
CDKN3-208ENST00000555837 C5orf52A6NGY3 159 aa13.68□□□□□ -0.22
CDKN3-208ENST00000555837 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
CDKN3-208ENST00000555837 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
CDKN3-208ENST00000555837 IGLV6-57P01721 117 aa13.67□□□□□ -0.22
CDKN3-208ENST00000555837 JOSD1Q15040 202 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms