RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
SNX6-205ENST00000555648 IGKV2D-26A0A0A0MRZ7 120 aa9.1□□□□□ -0.95
SNX6-205ENST00000555648 TMEM238C9JI98 176 aa9.1□□□□□ -0.95
SNX6-205ENST00000555648 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
SNX6-205ENST00000555648 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
SNX6-205ENST00000555648 A0A0U1RRA0 63 aa9.09□□□□□ -0.95
SNX6-205ENST00000555648 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
SNX6-205ENST00000555648 TRAV12-1A0A0B4J245 112 aa9.08□□□□□ -0.96
SNX6-205ENST00000555648 HSBP1O75506 76 aa9.08□□□□□ -0.96
SNX6-205ENST00000555648 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
SNX6-205ENST00000555648 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
SNX6-205ENST00000555648 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
SNX6-205ENST00000555648 M0R378 163 aa9.06□□□□□ -0.96
SNX6-205ENST00000555648 LINC00304Q8N9R0 145 aa9.06□□□□□ -0.96
SNX6-205ENST00000555648 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
SNX6-205ENST00000555648 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
SNX6-205ENST00000555648 H0Y8G0 127 aa9.04□□□□□ -0.96
SNX6-205ENST00000555648 SMIM13P0DJ93 91 aa9.04□□□□□ -0.96
SNX6-205ENST00000555648 HERV-K104P63124 156 aa9.04□□□□□ -0.96
SNX6-205ENST00000555648 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
SNX6-205ENST00000555648 BOD1L2Q8IYS8 172 aa9.03□□□□□ -0.96
SNX6-205ENST00000555648 MAP1LC3CQ9BXW4 147 aa9.03□□□□□ -0.96
SNX6-205ENST00000555648 S100A12P80511 92 aa9.02□□□□□ -0.97
SNX6-205ENST00000555648 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
SNX6-205ENST00000555648 Q8NDZ9 215 aa9.02□□□□□ -0.97
SNX6-205ENST00000555648 YPEL4Q96NS1 127 aa9.02□□□□□ -0.97
SNX6-205ENST00000555648 NDUFA12Q9UI09 145 aa9.02□□□□□ -0.97
SNX6-205ENST00000555648 RNF213Q63HN8 5207 aa9.02□□□□□ -0.97
SNX6-205ENST00000555648 MYMXA0A1B0GTQ4 84 aa9.01□□□□□ -0.97
SNX6-205ENST00000555648 MIR7-3HGQ8N6C7 128 aa9.01□□□□□ -0.97
SNX6-205ENST00000555648 PLEKHB2Q96CS7 222 aa9.01□□□□□ -0.97
SNX6-205ENST00000555648 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
SNX6-205ENST00000555648 PRYO14603 147 aa8.99□□□□□ -0.97
SNX6-205ENST00000555648 NCR3O14931 201 aa8.99□□□□□ -0.97
SNX6-205ENST00000555648 LEPROTL1O95214 131 aa8.99□□□□□ -0.97
SNX6-205ENST00000555648 A0A0U1RQV1 116 aa8.98□□□□□ -0.97
SNX6-205ENST00000555648 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
SNX6-205ENST00000555648 TRGC2P03986 189 aa8.98□□□□□ -0.97
SNX6-205ENST00000555648 RETNLBQ9BQ08 111 aa8.98□□□□□ -0.97
SNX6-205ENST00000555648 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
SNX6-205ENST00000555648 HERVK_113P61574 105 aa8.97□□□□□ -0.97
SNX6-205ENST00000555648 CTAG1AP78358 180 aa8.97□□□□□ -0.97
SNX6-205ENST00000555648 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
SNX6-205ENST00000555648 LPAP08519 4548 aa8.97□□□□□ -0.97
SNX6-205ENST00000555648 PLNP26678 52 aa8.96□□□□□ -0.98
SNX6-205ENST00000555648 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
SNX6-205ENST00000555648 SERF1AO75920 110 aa8.95□□□□□ -0.98
SNX6-205ENST00000555648 SPAG11AQ6PDA7 123 aa8.95□□□□□ -0.98
SNX6-205ENST00000555648 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
SNX6-205ENST00000555648 MIEN1Q9BRT3 115 aa8.95□□□□□ -0.98
SNX6-205ENST00000555648 LEPROTO15243 131 aa8.94□□□□□ -0.98
SNX6-205ENST00000555648 LINC00337Q8N6G1 96 aa8.94□□□□□ -0.98
SNX6-205ENST00000555648 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
SNX6-205ENST00000555648 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
SNX6-205ENST00000555648 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
SNX6-205ENST00000555648 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
SNX6-205ENST00000555648 DPM2O94777 84 aa8.93□□□□□ -0.98
SNX6-205ENST00000555648 FABP4P15090 132 aa8.93□□□□□ -0.98
SNX6-205ENST00000555648 LGALS3P17931 250 aaKnown RBP8.93□□□□□ -0.98
SNX6-205ENST00000555648 J3QQQ9 107 aa8.92□□□□□ -0.98
SNX6-205ENST00000555648 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
SNX6-205ENST00000555648 SPRR1AP35321 89 aa8.91□□□□□ -0.98
SNX6-205ENST00000555648 NMUP48645 174 aa8.91□□□□□ -0.98
SNX6-205ENST00000555648 DAND5Q8N907 189 aa8.91□□□□□ -0.98
SNX6-205ENST00000555648 IGKCP01834 107 aa8.9□□□□□ -0.98
SNX6-205ENST00000555648 DDTP30046 118 aa8.9□□□□□ -0.98
SNX6-205ENST00000555648 TSPEAR-AS2P59090 65 aa8.9□□□□□ -0.98
SNX6-205ENST00000555648 PPDPFQ9H3Y8 114 aa8.9□□□□□ -0.98
SNX6-205ENST00000555648 S100A7L2Q5SY68 101 aa8.89□□□□□ -0.99
SNX6-205ENST00000555648 PMCHL2Q9BQD1 86 aa8.89□□□□□ -0.99
SNX6-205ENST00000555648 TRBV10-2A0A0K0K1G8 114 aa8.88□□□□□ -0.99
SNX6-205ENST00000555648 LINC00310P59036 64 aa8.88□□□□□ -0.99
SNX6-205ENST00000555648 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
SNX6-205ENST00000555648 GAGE2AQ6NT46 116 aa8.88□□□□□ -0.99
SNX6-205ENST00000555648 Q8NBF4 154 aa8.88□□□□□ -0.99
SNX6-205ENST00000555648 SPANXB1Q9NS25 103 aaPredicted RBP8.88□□□□□ -0.99
SNX6-205ENST00000555648 LOC107984156A0A0G2JMH3 177 aa8.86□□□□□ -0.99
SNX6-205ENST00000555648 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
SNX6-205ENST00000555648 ARL17AQ8IVW1 177 aa8.86□□□□□ -0.99
SNX6-205ENST00000555648 B5MCH6 92 aa8.85□□□□□ -0.99
SNX6-205ENST00000555648 LCE2BO14633 110 aa8.84□□□□□ -0.99
SNX6-205ENST00000555648 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
SNX6-205ENST00000555648 SLC7A5P1Q8MH63 180 aa8.84□□□□□ -0.99
SNX6-205ENST00000555648 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
SNX6-205ENST00000555648 COLCA2A8K830 154 aa8.83□□□□□ -1
SNX6-205ENST00000555648 NDUFC2O95298 119 aa8.83□□□□□ -1
SNX6-205ENST00000555648 SPINK1P00995 79 aa8.83□□□□□ -1
SNX6-205ENST00000555648 JOSD1Q15040 202 aaPredicted RBP8.83□□□□□ -1
SNX6-205ENST00000555648 HINT1P49773 126 aaPredicted RBP8.82□□□□□ -1
SNX6-205ENST00000555648 NPC2P61916 151 aa8.82□□□□□ -1
SNX6-205ENST00000555648 LINC00483Q53H64 154 aa8.82□□□□□ -1
SNX6-205ENST00000555648 Q6ZRX8 168 aa8.82□□□□□ -1
SNX6-205ENST00000555648 CBY1Q9Y3M2 126 aa8.82□□□□□ -1
SNX6-205ENST00000555648 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
SNX6-205ENST00000555648 E9PLD3 99 aa8.81□□□□□ -1
SNX6-205ENST00000555648 MOBPQ13875 183 aa8.81□□□□□ -1
SNX6-205ENST00000555648 A0A0J9YXY3 114 aa8.8□□□□□ -1
SNX6-205ENST00000555648 ERC2-IT1O76042 136 aa8.8□□□□□ -1
SNX6-205ENST00000555648 IGLV6-57P01721 117 aa8.79□□□□□ -1
SNX6-205ENST00000555648 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms