RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 DNAH17Q9UFH2 4485 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 GVQW2A0A096LPI5 108 aaPredicted RBP4.11□□□□□ -1.75
LINC00643-203ENST00000555518 SPAG11BQ08648 103 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 GAGE2BQ13066 116 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 GAGE2EQ4V326 116 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 TTC32Q5I0X7 151 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 GAGE2AQ6NT46 116 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 C2orf82Q6UX34 121 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 C6orf223Q8N319 242 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 LINC00526Q96FQ7 95 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 TOMM7Q9P0U1 55 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 GAGE2DQ9UEU5 116 aa4.11□□□□□ -1.75
LINC00643-203ENST00000555518 TIMM17BO60830 172 aa4.1□□□□□ -1.75
LINC00643-203ENST00000555518 RMI2Q96E14 147 aa4.1□□□□□ -1.75
LINC00643-203ENST00000555518 SNHG12Q9BXW3 62 aa4.1□□□□□ -1.75
LINC00643-203ENST00000555518 SPANXB1Q9NS25 103 aaPredicted RBP4.1□□□□□ -1.75
LINC00643-203ENST00000555518 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
LINC00643-203ENST00000555518 LRCOL1A6NCL2 159 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 APOMO95445 188 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 CXCL5P42830 114 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 HERV-K104P63124 156 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 HSD52Q0P140 79 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 TAL2Q16559 108 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 BVES-AS1Q5T3Y7 98 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 UNQ6190/PRO20217Q6UXQ8 127 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 SCGB1D4Q6XE38 83 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 SPANXDQ9BXN6 97 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 SPANXCQ9NY87 97 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 C6orf48Q9UBA6 75 aa4.09□□□□□ -1.75
LINC00643-203ENST00000555518 DNAH11Q96DT5 4516 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 M0R2N4 97 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 LY6G6CO95867 125 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 FXYD2P54710 66 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 C9orf116Q5BN46 136 aaPredicted RBP4.08□□□□□ -1.76
LINC00643-203ENST00000555518 SFTA2Q6UW10 78 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 SOSTDC1Q6X4U4 206 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 DAND5Q8N907 189 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 C2orf48Q96LS8 159 aa4.08□□□□□ -1.76
LINC00643-203ENST00000555518 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 TMEM238C9JI98 176 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 LECT2O14960 151 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 HINT1P49773 126 aaPredicted RBP4.07□□□□□ -1.76
LINC00643-203ENST00000555518 Q6ZRU5 148 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 CEND1Q8N111 149 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
LINC00643-203ENST00000555518 LOC107984156A0A0G2JMH3 177 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 A0A0U1RRA0 63 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 F8WDY8 70 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 M0R143 59 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 CKS1BP61024 79 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 MEIG1Q5JSS6 88 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 MUSTN1Q8IVN3 82 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 ARL17AQ8IVW1 177 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 MIR7-3HGQ8N6C7 128 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 LINC00308Q8TCZ7 52 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 CAMK2N2Q96S95 79 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 HIST1H4GQ99525 98 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 PPDPFQ9H3Y8 114 aa4.06□□□□□ -1.76
LINC00643-203ENST00000555518 IFITM1P13164 125 aa4.05□□□□□ -1.76
LINC00643-203ENST00000555518 PFN2P35080 140 aa4.05□□□□□ -1.76
LINC00643-203ENST00000555518 NPC2P61916 151 aa4.05□□□□□ -1.76
LINC00643-203ENST00000555518 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
LINC00643-203ENST00000555518 SYCNQ0VAF6 134 aa4.05□□□□□ -1.76
LINC00643-203ENST00000555518 SRSF9Q13242 221 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC00643-203ENST00000555518 Q6ZVH6 145 aa4.05□□□□□ -1.76
LINC00643-203ENST00000555518 Q8NDZ9 215 aa4.05□□□□□ -1.76
LINC00643-203ENST00000555518 A0A087WTM6 91 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 LCE6AA0A183 80 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 A4D1N5 150 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 K7ERJ3 54 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 RTL8CO15255 209 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 LINC00158P58513 81 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 RPL24P83731 157 aaKnown RBP4.04□□□□□ -1.76
LINC00643-203ENST00000555518 COX17Q14061 63 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 BATFQ16520 125 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 C1orf134Q5TEV5 83 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 CARD19Q96LW7 228 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 RYR3Q15413 4870 aa4.04□□□□□ -1.76
LINC00643-203ENST00000555518 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 IGKV2-28A0A075B6P5 120 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 TAX1BP3O14907 124 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 PSCAO43653 123 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 IGKV2D-28P01615 120 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 TLX1NBP0CAT3 122 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 CFC1BP0CG36 223 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 CFC1P0CG37 223 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
LINC00643-203ENST00000555518 Q6ZRP5 223 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 Q8N814 137 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
LINC00643-203ENST00000555518 NDUFC2-KCTD14E9PQ53 114 aa4.02□□□□□ -1.77
LINC00643-203ENST00000555518 C14orf177Q52M58 125 aa4.02□□□□□ -1.77
LINC00643-203ENST00000555518 C9orf129Q5T035 196 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms