RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 A0A1B0GUT8 65 aa1.47□□□□□ -2.17
VRK1-203ENST00000555067 KIAA0556O60303 1618 aa1.47□□□□□ -2.17
VRK1-203ENST00000555067 ABCA6Q8N139 1617 aa1.47□□□□□ -2.17
VRK1-203ENST00000555067 SLIT1O75093 1534 aa1.46□□□□□ -2.18
VRK1-203ENST00000555067 ASXL1Q8IXJ9 1541 aa1.46□□□□□ -2.18
VRK1-203ENST00000555067 GOLGA4Q13439 2230 aaKnown RBP1.46□□□□□ -2.18
VRK1-203ENST00000555067 TRBV7-4A0A0J9YYF1 115 aa1.46□□□□□ -2.18
VRK1-203ENST00000555067 DEFB121Q5J5C9 76 aa1.46□□□□□ -2.18
VRK1-203ENST00000555067 GNG13Q9P2W3 67 aa1.46□□□□□ -2.18
VRK1-203ENST00000555067 HILPDAQ9Y5L2 63 aa1.46□□□□□ -2.18
VRK1-203ENST00000555067 SYCP2Q9BX26 1530 aa1.45□□□□□ -2.18
VRK1-203ENST00000555067 PIK3C2BO00750 1634 aa1.45□□□□□ -2.18
VRK1-203ENST00000555067 PAPPAQ13219 1627 aa1.45□□□□□ -2.18
VRK1-203ENST00000555067 H3BVH4 76 aa1.45□□□□□ -2.18
VRK1-203ENST00000555067 COX8AP10176 69 aa1.45□□□□□ -2.18
VRK1-203ENST00000555067 CEP170BQ9Y4F5 1589 aaPredicted RBP1.45□□□□□ -2.18
VRK1-203ENST00000555067 ZNF831Q5JPB2 1677 aa1.45□□□□□ -2.18
VRK1-203ENST00000555067 ITSN1Q15811 1721 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 A0A0D9SFI3 127 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 I3L2K1 104 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 TP53AIP1Q9HCN2 124 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 CFAP43Q8NDM7 1665 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 LRRC7Q96NW7 1537 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 ARFGEF2Q9Y6D5 1785 aa1.44□□□□□ -2.18
VRK1-203ENST00000555067 FXYD6-FXYD2A0A087WZ82 144 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 C3orf79P0CE67 100 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 COX6A2Q02221 97 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 ATP5EP2Q5VTU8 51 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 FXYD6Q9H0Q3 95 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 CLASP1Q7Z460 1538 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
VRK1-203ENST00000555067 CROCC2H7BZ55 1655 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 PREX1Q8TCU6 1659 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 ITSN2Q9NZM3 1697 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 CACNA1HO95180 2353 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 IFI27P40305 119 aaPredicted RBP1.42□□□□□ -2.18
VRK1-203ENST00000555067 DEFB112Q30KQ8 113 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 CNFNQ9BYD5 112 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 GLI2P10070 1586 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 DIP2AQ14689 1571 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 KIF1AQ12756 1690 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 PLCH1Q4KWH8 1693 aa1.42□□□□□ -2.18
VRK1-203ENST00000555067 NESP48681 1621 aa1.41□□□□□ -2.18
VRK1-203ENST00000555067 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
VRK1-203ENST00000555067 PRO0255Q9UI72 69 aa1.41□□□□□ -2.18
VRK1-203ENST00000555067 RALGAPBQ86X10 1494 aa1.41□□□□□ -2.18
VRK1-203ENST00000555067 CDC42BPGQ6DT37 1551 aa1.41□□□□□ -2.18
VRK1-203ENST00000555067 A0A1B0GUL6 1792 aa1.4□□□□□ -2.19
VRK1-203ENST00000555067 UGGT1Q9NYU2 1555 aa1.4□□□□□ -2.19
VRK1-203ENST00000555067 ATXN8Q156A1 80 aa1.4□□□□□ -2.19
VRK1-203ENST00000555067 LRRC37AA6NMS7 1700 aa1.4□□□□□ -2.19
VRK1-203ENST00000555067 USP32Q8NFA0 1604 aa1.4□□□□□ -2.19
VRK1-203ENST00000555067 PLCE1Q9P212 2302 aa1.39□□□□□ -2.19
VRK1-203ENST00000555067 SNRPGP15A8MWD9 76 aa1.39□□□□□ -2.19
VRK1-203ENST00000555067 MROH2AA6NES4 1674 aa1.39□□□□□ -2.19
VRK1-203ENST00000555067 URB1O60287 2271 aaKnown RBP1.38□□□□□ -2.19
VRK1-203ENST00000555067 TRAV21A0A0B4J279 112 aa1.38□□□□□ -2.19
VRK1-203ENST00000555067 PRB3Q04118 309 aaPredicted RBP1.38□□□□□ -2.19
VRK1-203ENST00000555067 ALS2Q96Q42 1657 aa1.38□□□□□ -2.19
VRK1-203ENST00000555067 MAST1Q9Y2H9 1570 aa1.38□□□□□ -2.19
VRK1-203ENST00000555067 CPS1P31327 1500 aa1.37□□□□□ -2.19
VRK1-203ENST00000555067 PIGYQ3MUY2 71 aa1.37□□□□□ -2.19
VRK1-203ENST00000555067 POLR1AO95602 1720 aaPredicted RBP1.37□□□□□ -2.19
VRK1-203ENST00000555067 QSER1Q2KHR3 1735 aa1.37□□□□□ -2.19
VRK1-203ENST00000555067 CICQ96RK0 1608 aaPredicted RBP1.37□□□□□ -2.19
VRK1-203ENST00000555067 WIZO95785 1651 aa1.36□□□□□ -2.19
VRK1-203ENST00000555067 NHSQ6T4R5 1651 aa1.36□□□□□ -2.19
VRK1-203ENST00000555067 GAFA1Q96PS6 74 aa1.36□□□□□ -2.19
VRK1-203ENST00000555067 DOPEY2Q9Y3R5 2298 aa1.35□□□□□ -2.19
VRK1-203ENST00000555067 DEFB123Q8N688 67 aa1.35□□□□□ -2.19
VRK1-203ENST00000555067 WFDC9Q8NEX5 89 aa1.35□□□□□ -2.19
VRK1-203ENST00000555067 CD163L1Q9NR16 1453 aa1.35□□□□□ -2.19
VRK1-203ENST00000555067 ABCC6O95255 1503 aa1.35□□□□□ -2.19
VRK1-203ENST00000555067 KIAA0586Q9BVV6 1533 aa1.35□□□□□ -2.19
VRK1-203ENST00000555067 TTC28Q96AY4 2481 aa1.34□□□□□ -2.19
VRK1-203ENST00000555067 LINC01549A6NIU2 74 aa1.34□□□□□ -2.19
VRK1-203ENST00000555067 NDUFB1O75438 58 aa1.34□□□□□ -2.19
VRK1-203ENST00000555067 PRH1P02810 166 aa1.34□□□□□ -2.19
VRK1-203ENST00000555067 Q8IZM0 81 aa1.34□□□□□ -2.19
VRK1-203ENST00000555067 EIF2AK4Q9P2K8 1649 aaKnown RBP1.33□□□□□ -2.2
VRK1-203ENST00000555067 ANKRD50Q9ULJ7 1429 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 UBR3Q6ZT12 1888 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 TIAM2Q8IVF5 1701 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 IFI6P09912 130 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 FCER1GP30273 86 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 NREPQ16612 68 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 TOMM5Q8N4H5 51 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 IQGAP2Q13576 1575 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 MEGF8Q7Z7M0 2845 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 C2CD3Q4AC94 2353 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 BIVM-ERCC5R4GMW8 1640 aa1.33□□□□□ -2.2
VRK1-203ENST00000555067 COL14A1Q05707 1796 aaKnown RBP1.32□□□□□ -2.2
VRK1-203ENST00000555067 K7EQZ3 153 aa1.32□□□□□ -2.2
VRK1-203ENST00000555067 COX7BP24311 80 aa1.32□□□□□ -2.2
VRK1-203ENST00000555067 ABCA5Q8WWZ7 1642 aa1.32□□□□□ -2.2
VRK1-203ENST00000555067 DOT1LQ8TEK3 1739 aa1.32□□□□□ -2.2
VRK1-203ENST00000555067 FMN2Q9NZ56 1722 aa1.32□□□□□ -2.2
VRK1-203ENST00000555067 PARP4Q9UKK3 1724 aaKnown RBP1.32□□□□□ -2.2
VRK1-203ENST00000555067 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
VRK1-203ENST00000555067 RICTORQ6R327 1708 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms