RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 REG3AQ06141 175 aa8.08□□□□□ -1.12
RIPK3-204ENST00000554756 COX17Q14061 63 aa8.08□□□□□ -1.12
RIPK3-204ENST00000554756 LINC00158P58513 81 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 CLPSL2Q6UWE3 100 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 DNAH6Q9C0G6 4158 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 PSCAO43653 123 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 ENHOQ6UWT2 76 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
RIPK3-204ENST00000554756 A0A1B0GVY2 172 aa8.06□□□□□ -1.12
RIPK3-204ENST00000554756 GAGE12HA6NDE8 117 aa8.06□□□□□ -1.12
RIPK3-204ENST00000554756 PCP4P48539 62 aa8.06□□□□□ -1.12
RIPK3-204ENST00000554756 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
RIPK3-204ENST00000554756 PRR34Q9NV39 138 aa8.06□□□□□ -1.12
RIPK3-204ENST00000554756 IGKV2D-24A0A075B6R9 120 aa8.05□□□□□ -1.12
RIPK3-204ENST00000554756 TRACP01848 142 aa8.05□□□□□ -1.12
RIPK3-204ENST00000554756 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
RIPK3-204ENST00000554756 CFAP161Q6P656 301 aa8.05□□□□□ -1.12
RIPK3-204ENST00000554756 CKS1BP61024 79 aa8.05□□□□□ -1.12
RIPK3-204ENST00000554756 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
RIPK3-204ENST00000554756 RMI2Q96E14 147 aa8.04□□□□□ -1.12
RIPK3-204ENST00000554756 TRAV8-4A0A0B4J246 113 aa8.03□□□□□ -1.12
RIPK3-204ENST00000554756 SCGB1A1P11684 91 aa8.03□□□□□ -1.12
RIPK3-204ENST00000554756 MALP21145 153 aa8.03□□□□□ -1.12
RIPK3-204ENST00000554756 SIGMAR1Q99720 223 aa8.03□□□□□ -1.12
RIPK3-204ENST00000554756 A0A087WTM6 91 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 KIAA0087Q14695 138 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 CLEC2BQ92478 149 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 LECT2O14960 151 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 NDUFC2O95298 119 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 FUSP35637 526 aaKnown RBP eCLIP8.02□□□□□ -1.13
RIPK3-204ENST00000554756 C1orf43Q9BWL3 253 aa8.02□□□□□ -1.13
RIPK3-204ENST00000554756 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
RIPK3-204ENST00000554756 H0YGX0 51 aa8.01□□□□□ -1.13
RIPK3-204ENST00000554756 PFN2P35080 140 aa8.01□□□□□ -1.13
RIPK3-204ENST00000554756 NTN5Q8WTR8 489 aaPredicted RBP8.01□□□□□ -1.13
RIPK3-204ENST00000554756 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
RIPK3-204ENST00000554756 LRCOL1A6NCL2 159 aa8□□□□□ -1.13
RIPK3-204ENST00000554756 KRTAP10-2P60368 255 aa8□□□□□ -1.13
RIPK3-204ENST00000554756 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
RIPK3-204ENST00000554756 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
RIPK3-204ENST00000554756 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
RIPK3-204ENST00000554756 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
RIPK3-204ENST00000554756 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
RIPK3-204ENST00000554756 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
RIPK3-204ENST00000554756 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
RIPK3-204ENST00000554756 DNAH2Q9P225 4427 aa7.97□□□□□ -1.13
RIPK3-204ENST00000554756 C16orf90A8MZG2 172 aa7.97□□□□□ -1.13
RIPK3-204ENST00000554756 HERC2O95714 4834 aa7.96□□□□□ -1.13
RIPK3-204ENST00000554756 A0A1B0GX51 115 aa7.96□□□□□ -1.14
RIPK3-204ENST00000554756 Q8N814 137 aa7.96□□□□□ -1.14
RIPK3-204ENST00000554756 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
RIPK3-204ENST00000554756 F8WDY8 70 aa7.95□□□□□ -1.14
RIPK3-204ENST00000554756 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
RIPK3-204ENST00000554756 TEX49A0A1B0GTD5 131 aa7.94□□□□□ -1.14
RIPK3-204ENST00000554756 DNAH17Q9UFH2 4485 aa7.94□□□□□ -1.14
RIPK3-204ENST00000554756 USP17L23D6RBM5 183 aa7.94□□□□□ -1.14
RIPK3-204ENST00000554756 DNAL4O96015 105 aa7.94□□□□□ -1.14
RIPK3-204ENST00000554756 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
RIPK3-204ENST00000554756 ACYP1P07311 99 aa7.93□□□□□ -1.14
RIPK3-204ENST00000554756 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
RIPK3-204ENST00000554756 IGLV5-52A0A0A0MRZ9 124 aa7.92□□□□□ -1.14
RIPK3-204ENST00000554756 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
RIPK3-204ENST00000554756 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
RIPK3-204ENST00000554756 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
RIPK3-204ENST00000554756 FRAS1Q86XX4 4008 aa7.91□□□□□ -1.14
RIPK3-204ENST00000554756 FAT2Q9NYQ8 4349 aa7.91□□□□□ -1.14
RIPK3-204ENST00000554756 C14orf177Q52M58 125 aa7.9□□□□□ -1.14
RIPK3-204ENST00000554756 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
RIPK3-204ENST00000554756 SNCGO76070 127 aa7.89□□□□□ -1.15
RIPK3-204ENST00000554756 UNQ6190/PRO20217Q6UXQ8 127 aa7.89□□□□□ -1.15
RIPK3-204ENST00000554756 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
RIPK3-204ENST00000554756 XGP55808 180 aa7.88□□□□□ -1.15
RIPK3-204ENST00000554756 KRTAP10-1P60331 282 aa7.88□□□□□ -1.15
RIPK3-204ENST00000554756 C21orf62-AS1Q17RA5 79 aa7.88□□□□□ -1.15
RIPK3-204ENST00000554756 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
RIPK3-204ENST00000554756 HIGD2BQ4VC39 106 aa7.87□□□□□ -1.15
RIPK3-204ENST00000554756 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
RIPK3-204ENST00000554756 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
RIPK3-204ENST00000554756 A0A087WYN8 130 aa7.87□□□□□ -1.15
RIPK3-204ENST00000554756 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
RIPK3-204ENST00000554756 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
RIPK3-204ENST00000554756 PCLOQ9Y6V0 5065 aa7.86□□□□□ -1.15
RIPK3-204ENST00000554756 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
RIPK3-204ENST00000554756 MT-ATP8P03928 68 aa7.85□□□□□ -1.15
RIPK3-204ENST00000554756 Q6Q795 121 aa7.85□□□□□ -1.15
RIPK3-204ENST00000554756 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
RIPK3-204ENST00000554756 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
RIPK3-204ENST00000554756 H3BQ85 93 aa7.84□□□□□ -1.15
RIPK3-204ENST00000554756 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
RIPK3-204ENST00000554756 C22orf24Q9Y442 160 aa7.84□□□□□ -1.15
RIPK3-204ENST00000554756 PKD1P98161 4303 aa7.84□□□□□ -1.15
RIPK3-204ENST00000554756 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
RIPK3-204ENST00000554756 LINC00526Q96FQ7 95 aa7.84□□□□□ -1.15
RIPK3-204ENST00000554756 SLPIP03973 132 aa7.83□□□□□ -1.16
RIPK3-204ENST00000554756 HECTD4Q9Y4D8 3996 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms