RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 TSPAN13O95857 204 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 G0S2P27469 103 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 HNRNPA3P51991 378 aaKnown RBP3.78□□□□□ -1.8
ATXN3-230ENST00000554673 HERVK_113P63121 156 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 S100A12P80511 92 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 SH2D6Q7Z4S9 175 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 MUC7Q8TAX7 377 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 NAA38Q9BRA0 125 aaKnown RBP3.78□□□□□ -1.8
ATXN3-230ENST00000554673 C6orf48Q9UBA6 75 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 NDUFA12Q9UI09 145 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 RYR2Q92736 4967 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 IGKV2-28A0A075B6P5 120 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 A0A1B0GWB2 263 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 TSTD3H0UI37 97 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 PANO1I0J062 215 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 LECT2O14960 151 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 IGKV2D-28P01615 120 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 SMIM13P0DJ93 91 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 HIGD2BQ4VC39 106 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 COX7B2Q8TF08 81 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 C2orf88Q9BSF0 95 aa3.77□□□□□ -1.81
ATXN3-230ENST00000554673 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-230ENST00000554673 A0A1B0GV90 55 aa3.76□□□□□ -1.81
ATXN3-230ENST00000554673 NPC2P61916 151 aa3.76□□□□□ -1.81
ATXN3-230ENST00000554673 Q6ZRU5 148 aa3.76□□□□□ -1.81
ATXN3-230ENST00000554673 KRTAP11-1Q8IUC1 163 aa3.76□□□□□ -1.81
ATXN3-230ENST00000554673 ORAOV1Q8WV07 137 aa3.76□□□□□ -1.81
ATXN3-230ENST00000554673 GVQW2A0A096LPI5 108 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-230ENST00000554673 NBDYA0A0U1RRE5 68 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 NUPR2A6NF83 97 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 M0R2N4 97 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 COX7A2LO14548 114 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 RTL8CO15255 209 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 CFC1P0CG37 223 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 CCL18P55774 89 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 PRR3P79522 188 aaKnown RBP3.75□□□□□ -1.81
ATXN3-230ENST00000554673 HSD52Q0P140 79 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 MUSTN1Q8IVN3 82 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 Q8IZM0 81 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 CEND1Q8N111 149 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
ATXN3-230ENST00000554673 KMT2CQ8NEZ4 4911 aaKnown RBP3.75□□□□□ -1.81
ATXN3-230ENST00000554673 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
ATXN3-230ENST00000554673 SPAG11BQ08648 103 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 SS18Q15532 418 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 MIAQ16674 131 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 C9orf129Q5T035 196 aaKnown RBP3.74□□□□□ -1.81
ATXN3-230ENST00000554673 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 LINC00308Q8TCZ7 52 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 SPANXDQ9BXN6 97 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 TOMM7Q9P0U1 55 aa3.74□□□□□ -1.81
ATXN3-230ENST00000554673 IGKV2D-24A0A075B6R9 120 aa3.73□□□□□ -1.81
ATXN3-230ENST00000554673 TIMM17BO60830 172 aa3.73□□□□□ -1.81
ATXN3-230ENST00000554673 BATFQ16520 125 aa3.73□□□□□ -1.81
ATXN3-230ENST00000554673 Q6ZRP5 223 aa3.73□□□□□ -1.81
ATXN3-230ENST00000554673 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
ATXN3-230ENST00000554673 ERG28Q9UKR5 140 aa3.73□□□□□ -1.81
ATXN3-230ENST00000554673 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 LOC107984156A0A0G2JMH3 177 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 FAM168BA1KXE4 195 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 H3BRM9 83 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 M0R143 59 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 HERVK_113P61574 105 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 ARL17AQ8IVW1 177 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 SND1-IT1Q9HBX3 110 aa3.72□□□□□ -1.81
ATXN3-230ENST00000554673 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.81
ATXN3-230ENST00000554673 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
ATXN3-230ENST00000554673 PFN2P35080 140 aa3.71□□□□□ -1.82
ATXN3-230ENST00000554673 SEC11AP67812 179 aa3.71□□□□□ -1.82
ATXN3-230ENST00000554673 TAL2Q16559 108 aa3.71□□□□□ -1.82
ATXN3-230ENST00000554673 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
ATXN3-230ENST00000554673 VAMP3Q15836 100 aa3.7□□□□□ -1.82
ATXN3-230ENST00000554673 HIST1H4GQ99525 98 aa3.7□□□□□ -1.82
ATXN3-230ENST00000554673 XAGE1AQ9HD64 81 aa3.7□□□□□ -1.82
ATXN3-230ENST00000554673 NHP2Q9NX24 153 aaKnown RBP3.7□□□□□ -1.82
ATXN3-230ENST00000554673 C22orf24Q9Y442 160 aa3.7□□□□□ -1.82
ATXN3-230ENST00000554673 RYR3Q15413 4870 aa3.7□□□□□ -1.82
ATXN3-230ENST00000554673 A0A087WTM6 91 aa3.69□□□□□ -1.82
ATXN3-230ENST00000554673 A0A096LNI7 61 aa3.69□□□□□ -1.82
ATXN3-230ENST00000554673 CRPP02741 224 aa3.69□□□□□ -1.82
ATXN3-230ENST00000554673 SMAGPQ0VAQ4 97 aa3.69□□□□□ -1.82
ATXN3-230ENST00000554673 RAB37Q96AX2 223 aa3.69□□□□□ -1.82
ATXN3-230ENST00000554673 PKHD1P08F94 4074 aa3.69□□□□□ -1.82
ATXN3-230ENST00000554673 A0A1B0GVY2 172 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 A0A1W2PNN7 141 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 EPM2AB3EWF7 344 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 APOMO95445 188 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 KRTAP10-6P60371 365 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-230ENST00000554673 SFTA2Q6UW10 78 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 SCGB1D4Q6XE38 83 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 UBE2DNLQ8IWF7 75 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 LRP1BQ9NZR2 4599 aa3.68□□□□□ -1.82
ATXN3-230ENST00000554673 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-230ENST00000554673 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms