RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SPANXA1Q9NS26 97 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 LAMTOR2Q9Y2Q5 125 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 PYGO1Q9Y3Y4 419 aa2.69□□□□□ -1.98
ATXN3-229ENST00000554672 SMKR1H3BMG3 65 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 K7EMI3 77 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 CEBPGP53567 150 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 RPL39P62891 51 aaKnown RBP2.68□□□□□ -1.98
ATXN3-229ENST00000554672 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 C6orf226Q5I0X4 101 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 CLLU1Q5K131 121 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 FAM19A3Q7Z5A8 133 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 SLC7A5P1Q8MH63 180 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 DAND5Q8N907 189 aa2.68□□□□□ -1.98
ATXN3-229ENST00000554672 TRAV9-1A0A075B6T8 112 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 F8W036 122 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 SPINK1P00995 79 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 ADIRFQ15847 76 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 UQCC3Q6UW78 93 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 Q6ZN92 141 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 C3orf22Q8N5N4 141 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 PLEKHB2Q96CS7 222 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 SMIM2Q9BVW6 85 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 GNB1LQ9BYB4 327 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
ATXN3-229ENST00000554672 A4D1N5 150 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 LINC01546A6NGU7 62 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 C5orf52A6NGY3 159 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 SMIM1B2RUZ4 78 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 D6R8Y8 96 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 M0R2T5 61 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 NPYP01303 97 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 MT-ND4LP03901 98 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 CKS2P33552 79 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 IFI27P40305 119 aaPredicted RBP2.66□□□□□ -1.98
ATXN3-229ENST00000554672 C10orf91Q5T1B1 145 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 TMEM136Q6ZRR5 245 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 Q8IZM0 81 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 ORMDL3Q8N138 153 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 AMELXQ99217 191 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 ALKBH7Q9BT30 221 aaPredicted RBP2.66□□□□□ -1.98
ATXN3-229ENST00000554672 TOMM7Q9P0U1 55 aa2.66□□□□□ -1.98
ATXN3-229ENST00000554672 TMEM218A2RU14 115 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 IGIPA6NJ69 53 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 F8VRH5 84 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 ATP6V1G1O75348 118 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 ADCYAP1P18509 176 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 RAB14P61106 215 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 PRLHP81277 87 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 FAM19A1Q7Z5A9 133 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 CBLN2Q8IUK8 224 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 Q8N8P6 123 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 NKAPP1Q8N9T2 125 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 PRELID3AQ96N28 172 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 SEC11CQ9BY50 192 aa2.65□□□□□ -1.99
ATXN3-229ENST00000554672 IGLV4-3A0A075B6K6 122 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 IGLV9-49A0A0B4J1Y8 123 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 LINC01549A6NIU2 74 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 RAB5AP20339 215 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 CXCL5P42830 114 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 MRPL54Q6P161 138 aaKnown RBP2.64□□□□□ -1.99
ATXN3-229ENST00000554672 C2orf66Q6UXQ4 117 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 TEX43Q6ZNM6 134 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 FAM19A2Q8N3H0 131 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 Q8NBF4 154 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 TMEM141Q96I45 108 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 C2orf88Q9BSF0 95 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
ATXN3-229ENST00000554672 IGLV8-61A0A075B6I0 122 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 G0S2P27469 103 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
ATXN3-229ENST00000554672 SEC11AP67812 179 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 COX19Q49B96 90 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 ORMDL2Q53FV1 153 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 PCOTHQ58A44 107 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 TIMM17AQ99595 171 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 VCX2Q9H322 139 aa2.63□□□□□ -1.99
ATXN3-229ENST00000554672 NXT2Q9NPJ8 142 aaKnown RBP2.63□□□□□ -1.99
ATXN3-229ENST00000554672 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 M0R378 163 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 SLC25A20O43772 301 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 DSCR10P59022 87 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 RAB5BP61020 215 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 NDUFA5Q16718 116 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 ERASQ7Z444 233 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 COMMD7Q86VX2 200 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 Q8N377 158 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 TOMM6Q96B49 74 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 HIGD2AQ9BW72 106 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 MAP1LC3AQ9H492 121 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 GEMIN7Q9H840 131 aaKnown RBP2.62□□□□□ -1.99
ATXN3-229ENST00000554672 CYSLTR1Q9Y271 337 aa2.62□□□□□ -1.99
ATXN3-229ENST00000554672 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-229ENST00000554672 SCO1O75880 301 aa2.61□□□□□ -1.99
ATXN3-229ENST00000554672 HERVK_113P63121 156 aa2.61□□□□□ -1.99
ATXN3-229ENST00000554672 SSBP3-AS1Q7Z2R9 100 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms