RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C16orf74Q96GX8 76 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 DYNC2H1Q8NCM8 4307 aaKnown RBP4.14□□□□□ -1.75
VPS33B-203ENST00000554264 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
VPS33B-203ENST00000554264 STAB2Q8WWQ8 2551 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 KNCNA6PVL3 124 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 F5H768 121 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 JMJD7-PLA2G4BH0Y9G9 81 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 CRYGAP11844 174 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 COX7CP15954 63 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 HIST1H4AP62805 103 aaKnown RBP4.13□□□□□ -1.75
VPS33B-203ENST00000554264 DEFB114Q30KQ6 69 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 CEMP1Q6PRD7 247 aaPredicted RBP4.13□□□□□ -1.75
VPS33B-203ENST00000554264 C18orf65Q6ZTR6 163 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 COX7B2Q8TF08 81 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 OBSCN-AS1Q96MR7 158 aa4.13□□□□□ -1.75
VPS33B-203ENST00000554264 IGHV3-73A0A0B4J1V6 119 aa4.12□□□□□ -1.75
VPS33B-203ENST00000554264 J3KT08 172 aa4.12□□□□□ -1.75
VPS33B-203ENST00000554264 BCE1O60756 84 aa4.12□□□□□ -1.75
VPS33B-203ENST00000554264 HTN1P15515 57 aa4.12□□□□□ -1.75
VPS33B-203ENST00000554264 SND1-IT1Q9HBX3 110 aa4.12□□□□□ -1.75
VPS33B-203ENST00000554264 A0A087WZ39 114 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 TRGV1A0A0A0MS02 117 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 TRBV10-3A0A0K0K1G6 114 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 NDUFC2O95298 119 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 TMEM258P61165 79 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 NPC2P61916 151 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 RPL18AQ02543 176 aaKnown RBP4.11□□□□□ -1.75
VPS33B-203ENST00000554264 COX17Q14061 63 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 RNASE13Q5GAN3 156 aaKnown RBP4.11□□□□□ -1.75
VPS33B-203ENST00000554264 CFAP161Q6P656 301 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 SMIM20Q8N5G0 67 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 DEFB104AQ8WTQ1 72 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 TM2D3Q9BRN9 247 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 ORMDL1Q9P0S3 153 aa4.11□□□□□ -1.75
VPS33B-203ENST00000554264 KLK5Q9Y337 293 aaPredicted RBP4.11□□□□□ -1.75
VPS33B-203ENST00000554264 DNAH1Q9P2D7 4330 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 TRAV13-1A0A0B4J241 112 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 NDUFC2-KCTD14E9PQ53 114 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 COX6A2Q02221 97 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 DEFB136Q30KP8 78 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 GAGE2AQ6NT46 116 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 CHCHD5Q9BSY4 110 aa4.1□□□□□ -1.75
VPS33B-203ENST00000554264 IGHV3-38A0A0C4DH36 116 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 hADV29S1A0JD25 119 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 A8MZ25 164 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 TMEM256-PLSCR3K7ERE1 68 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 PDE6GP18545 87 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 LINC00158P58513 81 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 Q8IZM0 81 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 MIR7-3HGQ8N6C7 128 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 OR13C6PQ8NH95 151 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 LINC00167Q96N53 147 aa4.09□□□□□ -1.75
VPS33B-203ENST00000554264 HUWE1Q7Z6Z7 4374 aaKnown RBP4.08□□□□□ -1.76
VPS33B-203ENST00000554264 TRGV2A0A075B6R0 118 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 TRBV6-8A0A0A6YYG3 113 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 A0A1B0GUV1 79 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 SS18Q15532 418 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 C1orf158Q8N1D5 194 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 SMIM11BQ8TCY0 68 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 SMCR5Q8TEV8 140 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
VPS33B-203ENST00000554264 IGLV5-37A0A075B6J1 123 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 TRGV4A0A0C4DH28 118 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 SMIM9A6NGZ8 99 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 CCKP06307 115 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 IGHV4-30-4P0DP06 118 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 CCL18P55774 89 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 LINC00337Q8N6G1 96 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 KIR2DL5BQ8NHK3 375 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 XCL2Q9UBD3 114 aa4.07□□□□□ -1.76
VPS33B-203ENST00000554264 IGKV2-28A0A075B6P5 120 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 IGKV2D-28P01615 120 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 C6orf226Q5I0X4 101 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 Q6ZTI0 123 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 UBL5Q9BZL1 73 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 C22orf24Q9Y442 160 aa4.06□□□□□ -1.76
VPS33B-203ENST00000554264 LECT2O14960 151 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 LYPD5Q6UWN5 251 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 TOMM7Q9P0U1 55 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 SORL1Q92673 2214 aa4.05□□□□□ -1.76
VPS33B-203ENST00000554264 A0A087WYN8 130 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 A0A0U1RRA0 63 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 Q8N814 137 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 Q9HAA7 133 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 NOP10Q9NPE3 64 aaKnown RBP4.04□□□□□ -1.76
VPS33B-203ENST00000554264 C14orf132Q9NPU4 83 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 Q9UF83 564 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
VPS33B-203ENST00000554264 DNAH7Q8WXX0 4024 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms