RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PRLHP81277 87 aa12.31□□□□□ -0.44
HIF1A-206ENST00000553999 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
HIF1A-206ENST00000553999 LEPROTL1O95214 131 aa12.3□□□□□ -0.44
HIF1A-206ENST00000553999 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
HIF1A-206ENST00000553999 COX17Q14061 63 aa12.3□□□□□ -0.44
HIF1A-206ENST00000553999 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
HIF1A-206ENST00000553999 COLCA2A8K830 154 aa12.28□□□□□ -0.44
HIF1A-206ENST00000553999 RPL24P83731 157 aaKnown RBP12.28□□□□□ -0.44
HIF1A-206ENST00000553999 FAM19A1Q7Z5A9 133 aa12.28□□□□□ -0.44
HIF1A-206ENST00000553999 ATP6V1G1O75348 118 aa12.27□□□□□ -0.45
HIF1A-206ENST00000553999 SFTA2Q6UW10 78 aa12.27□□□□□ -0.45
HIF1A-206ENST00000553999 A0A087X002 238 aa12.26□□□□□ -0.45
HIF1A-206ENST00000553999 RPL13AP40429 203 aaKnown RBP12.26□□□□□ -0.45
HIF1A-206ENST00000553999 TMEM126AQ9H061 195 aa12.26□□□□□ -0.45
HIF1A-206ENST00000553999 TSPEAR-AS2P59090 65 aa12.25□□□□□ -0.45
HIF1A-206ENST00000553999 NDUFA12Q9UI09 145 aa12.25□□□□□ -0.45
HIF1A-206ENST00000553999 NCR3O14931 201 aa12.24□□□□□ -0.45
HIF1A-206ENST00000553999 TSPAN13O95857 204 aa12.24□□□□□ -0.45
HIF1A-206ENST00000553999 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
HIF1A-206ENST00000553999 KRTAP13-1Q8IUC0 172 aa12.23□□□□□ -0.45
HIF1A-206ENST00000553999 BOD1L2Q8IYS8 172 aa12.23□□□□□ -0.45
HIF1A-206ENST00000553999 M0R378 163 aa12.22□□□□□ -0.45
HIF1A-206ENST00000553999 HSPB8Q9UJY1 196 aa12.22□□□□□ -0.45
HIF1A-206ENST00000553999 LRP2P98164 4655 aa12.21□□□□□ -0.45
HIF1A-206ENST00000553999 DAND5Q8N907 189 aa12.21□□□□□ -0.45
HIF1A-206ENST00000553999 CRYGAP11844 174 aa12.2□□□□□ -0.46
HIF1A-206ENST00000553999 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
HIF1A-206ENST00000553999 DPM2O94777 84 aa12.19□□□□□ -0.46
HIF1A-206ENST00000553999 TYMSOSQ8TAI1 123 aa12.19□□□□□ -0.46
HIF1A-206ENST00000553999 LEPROTO15243 131 aa12.18□□□□□ -0.46
HIF1A-206ENST00000553999 PLNP26678 52 aa12.18□□□□□ -0.46
HIF1A-206ENST00000553999 HERV-K104P63124 156 aa12.18□□□□□ -0.46
HIF1A-206ENST00000553999 PRR4Q16378 134 aa12.18□□□□□ -0.46
HIF1A-206ENST00000553999 HIGD2AQ9BW72 106 aa12.18□□□□□ -0.46
HIF1A-206ENST00000553999 IGKCP01834 107 aa12.16□□□□□ -0.46
HIF1A-206ENST00000553999 HERVK_113P61574 105 aa12.16□□□□□ -0.46
HIF1A-206ENST00000553999 PLEKHB2Q96CS7 222 aa12.16□□□□□ -0.46
HIF1A-206ENST00000553999 J3QQQ9 107 aa12.15□□□□□ -0.46
HIF1A-206ENST00000553999 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
HIF1A-206ENST00000553999 KRTAP13-2Q52LG2 175 aa12.15□□□□□ -0.46
HIF1A-206ENST00000553999 MAP1LC3CQ9BXW4 147 aa12.15□□□□□ -0.46
HIF1A-206ENST00000553999 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BBP33778 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BDP58876 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BCP62807 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST2H2BEQ16778 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BHQ93079 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BNQ99877 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 HIST1H2BMQ99879 126 aa12.13□□□□□ -0.47
HIF1A-206ENST00000553999 NPC2P61916 151 aa12.12□□□□□ -0.47
HIF1A-206ENST00000553999 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
HIF1A-206ENST00000553999 IGKV2D-26A0A0A0MRZ7 120 aa12.09□□□□□ -0.47
HIF1A-206ENST00000553999 LINC00587B1AMM8 73 aa12.09□□□□□ -0.47
HIF1A-206ENST00000553999 PRYO14603 147 aa12.09□□□□□ -0.47
HIF1A-206ENST00000553999 LPAP08519 4548 aa12.07□□□□□ -0.48
HIF1A-206ENST00000553999 C3orf22Q8N5N4 141 aa12.07□□□□□ -0.48
HIF1A-206ENST00000553999 RETNLBQ9BQ08 111 aa12.07□□□□□ -0.48
HIF1A-206ENST00000553999 SYS1-DBNDD2H3BUS1 97 aa12.06□□□□□ -0.48
HIF1A-206ENST00000553999 FAM229BQ4G0N7 80 aa12.06□□□□□ -0.48
HIF1A-206ENST00000553999 MIEN1Q9BRT3 115 aa12.06□□□□□ -0.48
HIF1A-206ENST00000553999 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
HIF1A-206ENST00000553999 LINC00304Q8N9R0 145 aa12.05□□□□□ -0.48
HIF1A-206ENST00000553999 NMUP48645 174 aa12.04□□□□□ -0.48
HIF1A-206ENST00000553999 PPDPFQ9H3Y8 114 aa12.04□□□□□ -0.48
HIF1A-206ENST00000553999 SPRR4Q96PI1 79 aa12.03□□□□□ -0.48
HIF1A-206ENST00000553999 A0A0J9YXY3 114 aa12.02□□□□□ -0.49
HIF1A-206ENST00000553999 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
HIF1A-206ENST00000553999 DDTP30046 118 aa12.02□□□□□ -0.49
HIF1A-206ENST00000553999 SOSTDC1Q6X4U4 206 aa12.02□□□□□ -0.49
HIF1A-206ENST00000553999 KCNQ1DNQ9H478 68 aa12.02□□□□□ -0.49
HIF1A-206ENST00000553999 E9PLD3 99 aa12.01□□□□□ -0.49
HIF1A-206ENST00000553999 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
HIF1A-206ENST00000553999 SMCR5Q8TEV8 140 aa12.01□□□□□ -0.49
HIF1A-206ENST00000553999 SPRR1AP35321 89 aa11.99□□□□□ -0.49
HIF1A-206ENST00000553999 KRTDAPP60985 99 aa11.99□□□□□ -0.49
HIF1A-206ENST00000553999 S100A7L2Q5SY68 101 aa11.99□□□□□ -0.49
HIF1A-206ENST00000553999 LINC00337Q8N6G1 96 aa11.99□□□□□ -0.49
HIF1A-206ENST00000553999 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
HIF1A-206ENST00000553999 S100A12P80511 92 aa11.98□□□□□ -0.49
HIF1A-206ENST00000553999 LINC01545Q5VT33 79 aa11.98□□□□□ -0.49
HIF1A-206ENST00000553999 SPANXB1Q9NS25 103 aaPredicted RBP11.98□□□□□ -0.49
HIF1A-206ENST00000553999 KRTAP4-16G5E9R7 235 aaPredicted RBP11.97□□□□□ -0.49
HIF1A-206ENST00000553999 C3orf79P0CE67 100 aa11.97□□□□□ -0.49
HIF1A-206ENST00000553999 RNF213Q63HN8 5207 aa11.97□□□□□ -0.49
HIF1A-206ENST00000553999 PET117Q6UWS5 81 aa11.96□□□□□ -0.49
HIF1A-206ENST00000553999 ZNF706Q9Y5V0 76 aaPredicted RBP11.96□□□□□ -0.49
HIF1A-206ENST00000553999 LOC107984156A0A0G2JMH3 177 aa11.95□□□□□ -0.5
HIF1A-206ENST00000553999 B5MCH6 92 aa11.95□□□□□ -0.5
HIF1A-206ENST00000553999 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
HIF1A-206ENST00000553999 GAGE2AQ6NT46 116 aa11.95□□□□□ -0.5
HIF1A-206ENST00000553999 ARL17AQ8IVW1 177 aa11.95□□□□□ -0.5
HIF1A-206ENST00000553999 TRBV10-2A0A0K0K1G8 114 aa11.94□□□□□ -0.5
HIF1A-206ENST00000553999 ZNF815PA8K554 130 aa11.94□□□□□ -0.5
HIF1A-206ENST00000553999 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
HIF1A-206ENST00000553999 ATOH7Q8N100 152 aa11.92□□□□□ -0.5
HIF1A-206ENST00000553999 NDUFC2O95298 119 aa11.91□□□□□ -0.5
HIF1A-206ENST00000553999 LITAFQ99732 161 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms