RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 BCE1O60756 84 aa10.64□□□□□ -0.71
FOXN3-204ENST00000553840 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
FOXN3-204ENST00000553840 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
FOXN3-204ENST00000553840 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
FOXN3-204ENST00000553840 TRAV12-1A0A0B4J245 112 aa10.63□□□□□ -0.71
FOXN3-204ENST00000553840 COX17Q14061 63 aa10.63□□□□□ -0.71
FOXN3-204ENST00000553840 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
FOXN3-204ENST00000553840 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
FOXN3-204ENST00000553840 C11orf86A6NJI1 115 aa10.61□□□□□ -0.71
FOXN3-204ENST00000553840 TMA7Q9Y2S6 64 aaKnown RBP10.6□□□□□ -0.71
FOXN3-204ENST00000553840 RPL24P83731 157 aaKnown RBP10.59□□□□□ -0.71
FOXN3-204ENST00000553840 ZNF625Q96I27 306 aaPredicted RBP10.59□□□□□ -0.71
FOXN3-204ENST00000553840 UBE2AP49459 152 aa10.58□□□□□ -0.72
FOXN3-204ENST00000553840 SND1-IT1Q9HBX3 110 aa10.58□□□□□ -0.72
FOXN3-204ENST00000553840 UBR4Q5T4S7 5183 aa10.58□□□□□ -0.72
FOXN3-204ENST00000553840 MAP1LC3CQ9BXW4 147 aa10.57□□□□□ -0.72
FOXN3-204ENST00000553840 IGKV2-28A0A075B6P5 120 aa10.56□□□□□ -0.72
FOXN3-204ENST00000553840 IGKV2D-28P01615 120 aa10.56□□□□□ -0.72
FOXN3-204ENST00000553840 COA6Q5JTJ3 125 aaKnown RBP10.56□□□□□ -0.72
FOXN3-204ENST00000553840 VPREB1P12018 145 aa10.54□□□□□ -0.72
FOXN3-204ENST00000553840 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
FOXN3-204ENST00000553840 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
FOXN3-204ENST00000553840 CRYGAP11844 174 aa10.53□□□□□ -0.72
FOXN3-204ENST00000553840 LINC00158P58513 81 aa10.53□□□□□ -0.72
FOXN3-204ENST00000553840 PLNP26678 52 aa10.52□□□□□ -0.73
FOXN3-204ENST00000553840 DPM2O94777 84 aa10.51□□□□□ -0.73
FOXN3-204ENST00000553840 LRP2P98164 4655 aa10.51□□□□□ -0.73
FOXN3-204ENST00000553840 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
FOXN3-204ENST00000553840 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
FOXN3-204ENST00000553840 KRTAP13-1Q8IUC0 172 aa10.5□□□□□ -0.73
FOXN3-204ENST00000553840 TYMSOSQ8TAI1 123 aa10.5□□□□□ -0.73
FOXN3-204ENST00000553840 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
FOXN3-204ENST00000553840 IGKCP01834 107 aa10.49□□□□□ -0.73
FOXN3-204ENST00000553840 A0A087X002 238 aa10.48□□□□□ -0.73
FOXN3-204ENST00000553840 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
FOXN3-204ENST00000553840 LINC00587B1AMM8 73 aa10.48□□□□□ -0.73
FOXN3-204ENST00000553840 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
FOXN3-204ENST00000553840 S100A6P06703 90 aa10.47□□□□□ -0.73
FOXN3-204ENST00000553840 KRTDAPP60985 99 aa10.47□□□□□ -0.73
FOXN3-204ENST00000553840 HERV-K104P63124 156 aa10.47□□□□□ -0.73
FOXN3-204ENST00000553840 PRLHP81277 87 aa10.47□□□□□ -0.73
FOXN3-204ENST00000553840 PRR4Q16378 134 aa10.47□□□□□ -0.73
FOXN3-204ENST00000553840 PET117Q6UWS5 81 aa10.47□□□□□ -0.73
FOXN3-204ENST00000553840 TMEM238C9JI98 176 aa10.46□□□□□ -0.73
FOXN3-204ENST00000553840 C3orf79P0CE67 100 aa10.46□□□□□ -0.73
FOXN3-204ENST00000553840 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.73
FOXN3-204ENST00000553840 TSPAN13O95857 204 aa10.45□□□□□ -0.74
FOXN3-204ENST00000553840 SMIM13P0DJ93 91 aa10.45□□□□□ -0.74
FOXN3-204ENST00000553840 HERVK_113P61574 105 aa10.45□□□□□ -0.74
FOXN3-204ENST00000553840 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
FOXN3-204ENST00000553840 M0R378 163 aa10.44□□□□□ -0.74
FOXN3-204ENST00000553840 S100A2P29034 98 aa10.44□□□□□ -0.74
FOXN3-204ENST00000553840 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
FOXN3-204ENST00000553840 HIST3H2BBQ8N257 126 aa10.43□□□□□ -0.74
FOXN3-204ENST00000553840 Q8NDZ9 215 aa10.43□□□□□ -0.74
FOXN3-204ENST00000553840 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
FOXN3-204ENST00000553840 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
FOXN3-204ENST00000553840 IGKV2D-26A0A0A0MRZ7 120 aa10.42□□□□□ -0.74
FOXN3-204ENST00000553840 LEPROTO15243 131 aa10.42□□□□□ -0.74
FOXN3-204ENST00000553840 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
FOXN3-204ENST00000553840 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
FOXN3-204ENST00000553840 MIR7-3HGQ8N6C7 128 aa10.41□□□□□ -0.74
FOXN3-204ENST00000553840 C20orf202A1L168 122 aa10.4□□□□□ -0.74
FOXN3-204ENST00000553840 SNRPEP62304 92 aaKnown RBP10.4□□□□□ -0.74
FOXN3-204ENST00000553840 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.74
FOXN3-204ENST00000553840 J3QQQ9 107 aa10.39□□□□□ -0.75
FOXN3-204ENST00000553840 TSPEAR-AS2P59090 65 aa10.39□□□□□ -0.75
FOXN3-204ENST00000553840 S100A12P80511 92 aa10.39□□□□□ -0.75
FOXN3-204ENST00000553840 HIST1H2BLQ99880 126 aa10.39□□□□□ -0.75
FOXN3-204ENST00000553840 PRYO14603 147 aa10.38□□□□□ -0.75
FOXN3-204ENST00000553840 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
FOXN3-204ENST00000553840 KRTAP13-2Q52LG2 175 aa10.38□□□□□ -0.75
FOXN3-204ENST00000553840 NCR3O14931 201 aa10.37□□□□□ -0.75
FOXN3-204ENST00000553840 LINC00304Q8N9R0 145 aa10.37□□□□□ -0.75
FOXN3-204ENST00000553840 E9PLD3 99 aa10.36□□□□□ -0.75
FOXN3-204ENST00000553840 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
FOXN3-204ENST00000553840 NMUP48645 174 aa10.34□□□□□ -0.75
FOXN3-204ENST00000553840 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
FOXN3-204ENST00000553840 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
FOXN3-204ENST00000553840 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
FOXN3-204ENST00000553840 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
FOXN3-204ENST00000553840 CTAG1AP78358 180 aa10.33□□□□□ -0.76
FOXN3-204ENST00000553840 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
FOXN3-204ENST00000553840 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
FOXN3-204ENST00000553840 LPAP08519 4548 aa10.32□□□□□ -0.76
FOXN3-204ENST00000553840 TRBV10-3A0A0K0K1G6 114 aa10.31□□□□□ -0.76
FOXN3-204ENST00000553840 LOC105371267A0A1B0GV96 52 aa10.31□□□□□ -0.76
FOXN3-204ENST00000553840 AKR1D1P51857 326 aa10.31□□□□□ -0.76
FOXN3-204ENST00000553840 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
FOXN3-204ENST00000553840 LOC107984156A0A0G2JMH3 177 aa10.3□□□□□ -0.76
FOXN3-204ENST00000553840 SPRR1AP35321 89 aa10.3□□□□□ -0.76
FOXN3-204ENST00000553840 ARL17AQ8IVW1 177 aa10.3□□□□□ -0.76
FOXN3-204ENST00000553840 DAND5Q8N907 189 aa10.3□□□□□ -0.76
FOXN3-204ENST00000553840 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
FOXN3-204ENST00000553840 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
FOXN3-204ENST00000553840 DDTP30046 118 aa10.27□□□□□ -0.77
FOXN3-204ENST00000553840 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.77
FOXN3-204ENST00000553840 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
FOXN3-204ENST00000553840 C3orf22Q8N5N4 141 aa10.27□□□□□ -0.77
FOXN3-204ENST00000553840 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms