RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 HMCN2Q8NDA2 5059 aa12.4□□□□□ -0.42
XRCC3-205ENST00000553807 A0A0U1RRA0 63 aa12.4□□□□□ -0.42
XRCC3-205ENST00000553807 H0Y9J4 135 aa12.4□□□□□ -0.42
XRCC3-205ENST00000553807 DPM2O94777 84 aa12.39□□□□□ -0.43
XRCC3-205ENST00000553807 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
XRCC3-205ENST00000553807 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
XRCC3-205ENST00000553807 VPREB1P12018 145 aa12.37□□□□□ -0.43
XRCC3-205ENST00000553807 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
XRCC3-205ENST00000553807 IGKCP01834 107 aa12.36□□□□□ -0.43
XRCC3-205ENST00000553807 SMIM13P0DJ93 91 aa12.36□□□□□ -0.43
XRCC3-205ENST00000553807 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
XRCC3-205ENST00000553807 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
XRCC3-205ENST00000553807 BCE1O60756 84 aa12.35□□□□□ -0.43
XRCC3-205ENST00000553807 ATP6V1G1O75348 118 aa12.35□□□□□ -0.43
XRCC3-205ENST00000553807 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
XRCC3-205ENST00000553807 KRTAP10-8P60410 259 aa12.35□□□□□ -0.43
XRCC3-205ENST00000553807 HERVK_113P61574 105 aa12.35□□□□□ -0.43
XRCC3-205ENST00000553807 RPL24P83731 157 aaKnown RBP12.35□□□□□ -0.43
XRCC3-205ENST00000553807 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
XRCC3-205ENST00000553807 LEPROTO15243 131 aa12.34□□□□□ -0.43
XRCC3-205ENST00000553807 ZNF861PO60384 105 aa12.34□□□□□ -0.43
XRCC3-205ENST00000553807 HERV-K104P63124 156 aa12.34□□□□□ -0.43
XRCC3-205ENST00000553807 Q8NDZ9 215 aa12.34□□□□□ -0.43
XRCC3-205ENST00000553807 PLEKHB2Q96CS7 222 aa12.34□□□□□ -0.43
XRCC3-205ENST00000553807 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
XRCC3-205ENST00000553807 MIR7-3HGQ8N6C7 128 aa12.31□□□□□ -0.44
XRCC3-205ENST00000553807 SYS1-DBNDD2H3BUS1 97 aa12.3□□□□□ -0.44
XRCC3-205ENST00000553807 J3QQQ9 107 aa12.3□□□□□ -0.44
XRCC3-205ENST00000553807 PRR26Q8N8Z3 221 aa12.3□□□□□ -0.44
XRCC3-205ENST00000553807 LGALS3P17931 250 aaKnown RBP12.29□□□□□ -0.44
XRCC3-205ENST00000553807 IGLV1-50A0A075B6I6 118 aa12.28□□□□□ -0.44
XRCC3-205ENST00000553807 LINC00587B1AMM8 73 aa12.28□□□□□ -0.44
XRCC3-205ENST00000553807 KRTAP1-4P0C5Y4 121 aa12.28□□□□□ -0.44
XRCC3-205ENST00000553807 UBE2AP49459 152 aa12.28□□□□□ -0.44
XRCC3-205ENST00000553807 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
XRCC3-205ENST00000553807 TMEM238C9JI98 176 aa12.27□□□□□ -0.45
XRCC3-205ENST00000553807 NMUP48645 174 aa12.25□□□□□ -0.45
XRCC3-205ENST00000553807 COA6Q5JTJ3 125 aaKnown RBP12.25□□□□□ -0.45
XRCC3-205ENST00000553807 DAND5Q8N907 189 aa12.25□□□□□ -0.45
XRCC3-205ENST00000553807 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
XRCC3-205ENST00000553807 NCR3O14931 201 aa12.24□□□□□ -0.45
XRCC3-205ENST00000553807 LINC01545Q5VT33 79 aa12.24□□□□□ -0.45
XRCC3-205ENST00000553807 M0R378 163 aa12.23□□□□□ -0.45
XRCC3-205ENST00000553807 PRLHP81277 87 aa12.23□□□□□ -0.45
XRCC3-205ENST00000553807 PET117Q6UWS5 81 aa12.23□□□□□ -0.45
XRCC3-205ENST00000553807 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
XRCC3-205ENST00000553807 E9PLD3 99 aa12.22□□□□□ -0.45
XRCC3-205ENST00000553807 KRTDAPP60985 99 aa12.22□□□□□ -0.45
XRCC3-205ENST00000553807 KRTAP13-1Q8IUC0 172 aa12.22□□□□□ -0.45
XRCC3-205ENST00000553807 C3orf79P0CE67 100 aa12.21□□□□□ -0.45
XRCC3-205ENST00000553807 S100A1P23297 94 aa12.21□□□□□ -0.45
XRCC3-205ENST00000553807 RPL13AP40429 203 aaKnown RBP12.18□□□□□ -0.46
XRCC3-205ENST00000553807 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
XRCC3-205ENST00000553807 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
XRCC3-205ENST00000553807 IGKV2D-26A0A0A0MRZ7 120 aa12.16□□□□□ -0.46
XRCC3-205ENST00000553807 C20orf202A1L168 122 aa12.14□□□□□ -0.47
XRCC3-205ENST00000553807 PRYO14603 147 aa12.14□□□□□ -0.47
XRCC3-205ENST00000553807 NPC2P61916 151 aa12.14□□□□□ -0.47
XRCC3-205ENST00000553807 A0A087X002 238 aa12.13□□□□□ -0.47
XRCC3-205ENST00000553807 TRBV10-3A0A0K0K1G6 114 aa12.13□□□□□ -0.47
XRCC3-205ENST00000553807 ANAPC11Q9NYG5 84 aa12.13□□□□□ -0.47
XRCC3-205ENST00000553807 LOC107984156A0A0G2JMH3 177 aa12.12□□□□□ -0.47
XRCC3-205ENST00000553807 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
XRCC3-205ENST00000553807 ARL17AQ8IVW1 177 aa12.12□□□□□ -0.47
XRCC3-205ENST00000553807 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
XRCC3-205ENST00000553807 ZNF815PA8K554 130 aa12.11□□□□□ -0.47
XRCC3-205ENST00000553807 CRYGAP11844 174 aa12.11□□□□□ -0.47
XRCC3-205ENST00000553807 SOSTDC1Q6X4U4 206 aa12.1□□□□□ -0.47
XRCC3-205ENST00000553807 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
XRCC3-205ENST00000553807 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
XRCC3-205ENST00000553807 SPANXB1Q9NS25 103 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-205ENST00000553807 ATOH7Q8N100 152 aa12.09□□□□□ -0.47
XRCC3-205ENST00000553807 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.48
XRCC3-205ENST00000553807 ETDCA0A1B0GVM5 59 aa12.08□□□□□ -0.48
XRCC3-205ENST00000553807 EIF4EBP3O60516 100 aaPredicted RBP12.08□□□□□ -0.48
XRCC3-205ENST00000553807 DDTP30046 118 aa12.08□□□□□ -0.48
XRCC3-205ENST00000553807 S100A12P80511 92 aa12.08□□□□□ -0.48
XRCC3-205ENST00000553807 UBR4Q5T4S7 5183 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 NDUFC2O95298 119 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 SPRR1AP35321 89 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 S100A7L2Q5SY68 101 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 LINC00337Q8N6G1 96 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 TYMSOSQ8TAI1 123 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 LITAFQ99732 161 aa12.06□□□□□ -0.48
XRCC3-205ENST00000553807 TIMM17BO60830 172 aa12.05□□□□□ -0.48
XRCC3-205ENST00000553807 S100A2P29034 98 aa12.05□□□□□ -0.48
XRCC3-205ENST00000553807 FAM229BQ4G0N7 80 aa12.05□□□□□ -0.48
XRCC3-205ENST00000553807 ANKRD39Q53RE8 183 aa12.05□□□□□ -0.48
XRCC3-205ENST00000553807 HIST3H2BBQ8N257 126 aa12.05□□□□□ -0.48
XRCC3-205ENST00000553807 KRTAP13-2Q52LG2 175 aa12.03□□□□□ -0.48
XRCC3-205ENST00000553807 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
XRCC3-205ENST00000553807 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
XRCC3-205ENST00000553807 KRTAP4-16G5E9R7 235 aaPredicted RBP12.02□□□□□ -0.49
XRCC3-205ENST00000553807 S100A6P06703 90 aa12.02□□□□□ -0.49
XRCC3-205ENST00000553807 LRP2P98164 4655 aa12.02□□□□□ -0.49
XRCC3-205ENST00000553807 IGLV6-57P01721 117 aa12.01□□□□□ -0.49
XRCC3-205ENST00000553807 AKR1D1P51857 326 aa12.01□□□□□ -0.49
XRCC3-205ENST00000553807 SCGB1D4Q6XE38 83 aa12.01□□□□□ -0.49
XRCC3-205ENST00000553807 SPRR4Q96PI1 79 aa12□□□□□ -0.49
XRCC3-205ENST00000553807 TRAV23DV6A0A075B6W5 121 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms