RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
ACTN1-210ENST00000553779 CKS1BP61024 79 aa6.09□□□□□ -1.43
ACTN1-210ENST00000553779 UBE2BP63146 152 aa6.09□□□□□ -1.43
ACTN1-210ENST00000553779 MAP1LC3AQ9H492 121 aa6.09□□□□□ -1.43
ACTN1-210ENST00000553779 A0A096LNJ9 63 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 A0A1B0GWB2 263 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 K7EMI3 77 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 DPM2O94777 84 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 IFI27P40305 119 aaPredicted RBP6.08□□□□□ -1.44
ACTN1-210ENST00000553779 UBE2D1P51668 147 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 RPL39P62891 51 aaKnown RBP6.08□□□□□ -1.44
ACTN1-210ENST00000553779 MRPL51Q4U2R6 128 aaKnown RBP6.08□□□□□ -1.44
ACTN1-210ENST00000553779 GAGE2EQ4V326 116 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 NRACQ8N912 160 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 TIMM21Q9BVV7 248 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
ACTN1-210ENST00000553779 GAGE2DQ9UEU5 116 aa6.08□□□□□ -1.44
ACTN1-210ENST00000553779 A6NJY4 79 aa6.07□□□□□ -1.44
ACTN1-210ENST00000553779 F8WDY8 70 aa6.07□□□□□ -1.44
ACTN1-210ENST00000553779 H3BMG7 143 aa6.07□□□□□ -1.44
ACTN1-210ENST00000553779 IGKCP01834 107 aa6.07□□□□□ -1.44
ACTN1-210ENST00000553779 PLNP26678 52 aa6.07□□□□□ -1.44
ACTN1-210ENST00000553779 C20orf78Q9BR46 151 aa6.07□□□□□ -1.44
ACTN1-210ENST00000553779 MRPL35Q9NZE8 188 aaKnown RBP6.07□□□□□ -1.44
ACTN1-210ENST00000553779 D6R8Y8 96 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 H0Y8G0 127 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 M0QXV9 152 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 IGLV7-43P04211 117 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 RAB37Q96AX2 223 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 SMIM2Q9BVW6 85 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 SPANXDQ9BXN6 97 aa6.06□□□□□ -1.44
ACTN1-210ENST00000553779 TRBV20-1A0A075B6N2 111 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 TRAV12-1A0A0B4J245 112 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 FAM168BA1KXE4 195 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 H0Y9J4 135 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 TNFRSF6BO95407 300 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 NMUP48645 174 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 Q8N8P6 123 aa6.05□□□□□ -1.44
ACTN1-210ENST00000553779 PRSS2P07478 247 aa6.04□□□□□ -1.44
ACTN1-210ENST00000553779 UNQ6190/PRO20217Q6UXQ8 127 aa6.04□□□□□ -1.44
ACTN1-210ENST00000553779 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
ACTN1-210ENST00000553779 RPL32P62910 135 aaKnown RBP6.03□□□□□ -1.44
ACTN1-210ENST00000553779 MRPS36P82909 103 aaKnown RBP6.03□□□□□ -1.44
ACTN1-210ENST00000553779 PRR4Q16378 134 aa6.03□□□□□ -1.44
ACTN1-210ENST00000553779 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
ACTN1-210ENST00000553779 PCP2Q8IVA1 136 aa6.03□□□□□ -1.44
ACTN1-210ENST00000553779 GEMIN7Q9H840 131 aaKnown RBP6.03□□□□□ -1.44
ACTN1-210ENST00000553779 C6orf48Q9UBA6 75 aa6.03□□□□□ -1.44
ACTN1-210ENST00000553779 IGHV3OR16-9A0A0B4J2B5 98 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 LOC389332A0A1B0GUA5 103 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 TSPAN13O95857 204 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 NPYP01303 97 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
ACTN1-210ENST00000553779 FXYD2P54710 66 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 C10orf25Q5T742 122 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 PPDPFLQ8WWR9 84 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 NHP2Q9NX24 153 aaKnown RBP6.02□□□□□ -1.45
ACTN1-210ENST00000553779 TOMM7Q9P0U1 55 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 PRO0461Q9UI25 63 aa6.02□□□□□ -1.45
ACTN1-210ENST00000553779 TRBV30A0A0K0K1B3 111 aa6.01□□□□□ -1.45
ACTN1-210ENST00000553779 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
ACTN1-210ENST00000553779 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
ACTN1-210ENST00000553779 HIST1H4GQ99525 98 aa6.01□□□□□ -1.45
ACTN1-210ENST00000553779 NDUFC2-KCTD14E9PQ53 114 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 ETDBQ3ZM63 59 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 ORMDL2Q53FV1 153 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 ZC2HC1BQ5TFG8 222 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 C2orf82Q6UX34 121 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 TP73-AS1Q9UF72 201 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 ERG28Q9UKR5 140 aa6□□□□□ -1.45
ACTN1-210ENST00000553779 MYMXA0A1B0GTQ4 84 aa5.99□□□□□ -1.45
ACTN1-210ENST00000553779 F8VRH5 84 aa5.99□□□□□ -1.45
ACTN1-210ENST00000553779 SPINK8P0C7L1 97 aa5.99□□□□□ -1.45
ACTN1-210ENST00000553779 Q6Q795 121 aa5.99□□□□□ -1.45
ACTN1-210ENST00000553779 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
ACTN1-210ENST00000553779 IGLV4-3A0A075B6K6 122 aa5.98□□□□□ -1.45
ACTN1-210ENST00000553779 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
ACTN1-210ENST00000553779 LINC00242Q5T6M2 205 aa5.98□□□□□ -1.45
ACTN1-210ENST00000553779 TEN1Q86WV5 123 aa5.98□□□□□ -1.45
ACTN1-210ENST00000553779 IGKV2D-26A0A0A0MRZ7 120 aa5.97□□□□□ -1.45
ACTN1-210ENST00000553779 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
ACTN1-210ENST00000553779 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
ACTN1-210ENST00000553779 NAA38Q9BRA0 125 aaKnown RBP5.97□□□□□ -1.45
ACTN1-210ENST00000553779 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
ACTN1-210ENST00000553779 LPAP08519 4548 aa5.97□□□□□ -1.45
ACTN1-210ENST00000553779 HERVK_113P61574 105 aa5.96□□□□□ -1.46
ACTN1-210ENST00000553779 C9orf129Q5T035 196 aaKnown RBP5.96□□□□□ -1.46
ACTN1-210ENST00000553779 C2orf66Q6UXQ4 117 aa5.96□□□□□ -1.46
ACTN1-210ENST00000553779 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
ACTN1-210ENST00000553779 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
ACTN1-210ENST00000553779 SCGB1C2P0DMR2 95 aa5.95□□□□□ -1.46
ACTN1-210ENST00000553779 KIAA0087Q14695 138 aa5.95□□□□□ -1.46
ACTN1-210ENST00000553779 TOMM6Q96B49 74 aa5.95□□□□□ -1.46
ACTN1-210ENST00000553779 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
ACTN1-210ENST00000553779 ZNF861PO60384 105 aa5.94□□□□□ -1.46
ACTN1-210ENST00000553779 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
ACTN1-210ENST00000553779 RPL28P46779 137 aaKnown RBP5.94□□□□□ -1.46
ACTN1-210ENST00000553779 Q8IZM0 81 aa5.94□□□□□ -1.46
ACTN1-210ENST00000553779 LINC01561Q8N1V8 128 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms