RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 SLC25A34Q6PIV7 304 aa12.22□□□□□ -0.45
PSEN1-207ENST00000553599 A0A1W2PNN7 141 aa12.21□□□□□ -0.45
PSEN1-207ENST00000553599 RPL24P83731 157 aaKnown RBP12.21□□□□□ -0.45
PSEN1-207ENST00000553599 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
PSEN1-207ENST00000553599 C14orf144Q96I85 54 aa12.21□□□□□ -0.45
PSEN1-207ENST00000553599 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
PSEN1-207ENST00000553599 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
PSEN1-207ENST00000553599 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
PSEN1-207ENST00000553599 DAND5Q8N907 189 aa12.2□□□□□ -0.46
PSEN1-207ENST00000553599 IGLV5-37A0A075B6J1 123 aa12.19□□□□□ -0.46
PSEN1-207ENST00000553599 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
PSEN1-207ENST00000553599 PPDPFQ9H3Y8 114 aa12.19□□□□□ -0.46
PSEN1-207ENST00000553599 IFITM1P13164 125 aa12.18□□□□□ -0.46
PSEN1-207ENST00000553599 FAM19A5Q7Z5A7 132 aaPredicted RBP12.18□□□□□ -0.46
PSEN1-207ENST00000553599 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
PSEN1-207ENST00000553599 TP73-AS1Q9UF72 201 aa12.18□□□□□ -0.46
PSEN1-207ENST00000553599 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
PSEN1-207ENST00000553599 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
PSEN1-207ENST00000553599 BIRC6Q9NR09 4857 aa12.17□□□□□ -0.46
PSEN1-207ENST00000553599 APOBP04114 4563 aaKnown RBP12.16□□□□□ -0.46
PSEN1-207ENST00000553599 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
PSEN1-207ENST00000553599 KRTAP7-1Q8IUC3 87 aa12.16□□□□□ -0.46
PSEN1-207ENST00000553599 NKAPP1Q8N9T2 125 aa12.16□□□□□ -0.46
PSEN1-207ENST00000553599 M0QXV9 152 aa12.15□□□□□ -0.46
PSEN1-207ENST00000553599 VPREB1P12018 145 aa12.15□□□□□ -0.46
PSEN1-207ENST00000553599 HAMPP81172 84 aa12.15□□□□□ -0.46
PSEN1-207ENST00000553599 LBHQ53QV2 105 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-207ENST00000553599 NDUFC2O95298 119 aa12.14□□□□□ -0.47
PSEN1-207ENST00000553599 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
PSEN1-207ENST00000553599 C22orf24Q9Y442 160 aa12.14□□□□□ -0.47
PSEN1-207ENST00000553599 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
PSEN1-207ENST00000553599 C7orf33Q8WU49 177 aa12.13□□□□□ -0.47
PSEN1-207ENST00000553599 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
PSEN1-207ENST00000553599 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
PSEN1-207ENST00000553599 NPC2P61916 151 aa12.11□□□□□ -0.47
PSEN1-207ENST00000553599 C12orf57Q99622 126 aa12.11□□□□□ -0.47
PSEN1-207ENST00000553599 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
PSEN1-207ENST00000553599 PHF5AQ7RTV0 110 aaKnown RBP12.1□□□□□ -0.47
PSEN1-207ENST00000553599 M0R378 163 aa12.09□□□□□ -0.47
PSEN1-207ENST00000553599 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-207ENST00000553599 C2orf91Q6ZV80 131 aa12.09□□□□□ -0.47
PSEN1-207ENST00000553599 MUSTN1Q8IVN3 82 aa12.09□□□□□ -0.47
PSEN1-207ENST00000553599 Q8NDZ9 215 aa12.09□□□□□ -0.47
PSEN1-207ENST00000553599 HIST1H4GQ99525 98 aa12.09□□□□□ -0.47
PSEN1-207ENST00000553599 RYR1P21817 5038 aa12.09□□□□□ -0.47
PSEN1-207ENST00000553599 TAL2Q16559 108 aa12.08□□□□□ -0.48
PSEN1-207ENST00000553599 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
PSEN1-207ENST00000553599 LINC00518Q8N0U6 118 aa12.07□□□□□ -0.48
PSEN1-207ENST00000553599 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
PSEN1-207ENST00000553599 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
PSEN1-207ENST00000553599 UBE2BP63146 152 aa12.06□□□□□ -0.48
PSEN1-207ENST00000553599 FAM229AH3BQW9 127 aa12.05□□□□□ -0.48
PSEN1-207ENST00000553599 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-207ENST00000553599 NCR3O14931 201 aa12.04□□□□□ -0.48
PSEN1-207ENST00000553599 PRR3P79522 188 aaKnown RBP12.04□□□□□ -0.48
PSEN1-207ENST00000553599 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
PSEN1-207ENST00000553599 IGLV1-50A0A075B6I6 118 aa12.02□□□□□ -0.49
PSEN1-207ENST00000553599 GAGE10A6NGK3 116 aa12.02□□□□□ -0.49
PSEN1-207ENST00000553599 TSTD3H0UI37 97 aa12.02□□□□□ -0.49
PSEN1-207ENST00000553599 Q8N1X5 172 aa12.02□□□□□ -0.49
PSEN1-207ENST00000553599 HSPG2P98160 4391 aa12.02□□□□□ -0.49
PSEN1-207ENST00000553599 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
PSEN1-207ENST00000553599 CBY1Q9Y3M2 126 aa12.01□□□□□ -0.49
PSEN1-207ENST00000553599 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
PSEN1-207ENST00000553599 RPL37AP8A6NKH3 93 aa12□□□□□ -0.49
PSEN1-207ENST00000553599 IGKV2D-28P01615 120 aa12□□□□□ -0.49
PSEN1-207ENST00000553599 PLA2G1BP04054 148 aaKnown RBP12□□□□□ -0.49
PSEN1-207ENST00000553599 RPL37AP61513 92 aaKnown RBP12□□□□□ -0.49
PSEN1-207ENST00000553599 HSD52Q0P140 79 aa12□□□□□ -0.49
PSEN1-207ENST00000553599 S100A7L2Q5SY68 101 aa12□□□□□ -0.49
PSEN1-207ENST00000553599 A4D1N5 150 aa11.99□□□□□ -0.49
PSEN1-207ENST00000553599 DDTP30046 118 aa11.99□□□□□ -0.49
PSEN1-207ENST00000553599 CEND1Q8N111 149 aa11.99□□□□□ -0.49
PSEN1-207ENST00000553599 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
PSEN1-207ENST00000553599 IGLV6-57P01721 117 aa11.98□□□□□ -0.49
PSEN1-207ENST00000553599 TMEM126AQ9H061 195 aa11.98□□□□□ -0.49
PSEN1-207ENST00000553599 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
PSEN1-207ENST00000553599 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
PSEN1-207ENST00000553599 KCNQ1DNQ9H478 68 aa11.97□□□□□ -0.49
PSEN1-207ENST00000553599 TRAV13-2A0A0B4J235 113 aa11.96□□□□□ -0.49
PSEN1-207ENST00000553599 TMEM238LA0A1B0GVL6 79 aa11.96□□□□□ -0.49
PSEN1-207ENST00000553599 A6NJY4 79 aa11.96□□□□□ -0.49
PSEN1-207ENST00000553599 PRYO14603 147 aa11.96□□□□□ -0.49
PSEN1-207ENST00000553599 Q5VSD8 79 aa11.96□□□□□ -0.49
PSEN1-207ENST00000553599 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
PSEN1-207ENST00000553599 OR13C6PQ8NH95 151 aa11.95□□□□□ -0.5
PSEN1-207ENST00000553599 C1orf137Q5JT78 98 aa11.94□□□□□ -0.5
PSEN1-207ENST00000553599 REG3GQ6UW15 175 aa11.94□□□□□ -0.5
PSEN1-207ENST00000553599 A6NDN8 102 aa11.92□□□□□ -0.5
PSEN1-207ENST00000553599 BCE1O60756 84 aa11.92□□□□□ -0.5
PSEN1-207ENST00000553599 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
PSEN1-207ENST00000553599 KRTAP10-4P60372 401 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-207ENST00000553599 FAT1Q14517 4588 aa11.91□□□□□ -0.5
PSEN1-207ENST00000553599 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
PSEN1-207ENST00000553599 SPRR1AP35321 89 aa11.9□□□□□ -0.5
PSEN1-207ENST00000553599 HERC2O95714 4834 aa11.89□□□□□ -0.51
PSEN1-207ENST00000553599 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
PSEN1-207ENST00000553599 FXYD2P54710 66 aa11.89□□□□□ -0.51
PSEN1-207ENST00000553599 RAB37Q96AX2 223 aa11.88□□□□□ -0.51
PSEN1-207ENST00000553599 KRTAP17-1Q9BYP8 105 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms