RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
TMEM260-204ENST00000553335 A0A096LNI7 61 aa6.23□□□□□ -1.41
TMEM260-204ENST00000553335 IGKV2-24A0A0C4DH68 120 aa6.23□□□□□ -1.41
TMEM260-204ENST00000553335 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
TMEM260-204ENST00000553335 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
TMEM260-204ENST00000553335 DPH3Q96FX2 82 aa6.23□□□□□ -1.41
TMEM260-204ENST00000553335 KRTAP10-1P60331 282 aa6.22□□□□□ -1.41
TMEM260-204ENST00000553335 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
TMEM260-204ENST00000553335 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
TMEM260-204ENST00000553335 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 Q6ZVH6 145 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 C12orf57Q99622 126 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 MIEN1Q9BRT3 115 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 KRTAP4-6Q9BYQ5 205 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
TMEM260-204ENST00000553335 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
TMEM260-204ENST00000553335 DAND5Q8N907 189 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 COPS9Q8WXC6 57 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 SPANXDQ9BXN6 97 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 SPANXCQ9NY87 97 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 UQCR10Q9UDW1 63 aa6.2□□□□□ -1.42
TMEM260-204ENST00000553335 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
TMEM260-204ENST00000553335 SRSF9Q13242 221 aaKnown RBP eCLIP6.19□□□□□ -1.42
TMEM260-204ENST00000553335 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
TMEM260-204ENST00000553335 Q6ZSA8 131 aa6.19□□□□□ -1.42
TMEM260-204ENST00000553335 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
TMEM260-204ENST00000553335 LITAFQ99732 161 aa6.19□□□□□ -1.42
TMEM260-204ENST00000553335 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
TMEM260-204ENST00000553335 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 PANO1I0J062 215 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 IFITM1P13164 125 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 NPC2P61916 151 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
TMEM260-204ENST00000553335 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
TMEM260-204ENST00000553335 A0A087WYN8 130 aa6.17□□□□□ -1.42
TMEM260-204ENST00000553335 TSTD3H0UI37 97 aa6.17□□□□□ -1.42
TMEM260-204ENST00000553335 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
TMEM260-204ENST00000553335 PRO1933Q9H354 126 aa6.17□□□□□ -1.42
TMEM260-204ENST00000553335 TP73-AS1Q9UF72 201 aa6.17□□□□□ -1.42
TMEM260-204ENST00000553335 A0A1W2PNN7 141 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 FAM19A5Q7Z5A7 132 aaPredicted RBP6.16□□□□□ -1.42
TMEM260-204ENST00000553335 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 NKAPP1Q8N9T2 125 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 HIST1H4GQ99525 98 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 PPDPFQ9H3Y8 114 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
TMEM260-204ENST00000553335 FAM168BA1KXE4 195 aa6.15□□□□□ -1.42
TMEM260-204ENST00000553335 NDUFC2O95298 119 aa6.15□□□□□ -1.42
TMEM260-204ENST00000553335 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
TMEM260-204ENST00000553335 TAL2Q16559 108 aa6.15□□□□□ -1.42
TMEM260-204ENST00000553335 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
TMEM260-204ENST00000553335 CIRBP-AS1Q8TBR5 109 aa6.15□□□□□ -1.42
TMEM260-204ENST00000553335 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
TMEM260-204ENST00000553335 PCP4P48539 62 aa6.14□□□□□ -1.43
TMEM260-204ENST00000553335 LBHQ53QV2 105 aaPredicted RBP6.14□□□□□ -1.43
TMEM260-204ENST00000553335 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
TMEM260-204ENST00000553335 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
TMEM260-204ENST00000553335 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
TMEM260-204ENST00000553335 PKHD1P08F94 4074 aa6.14□□□□□ -1.43
TMEM260-204ENST00000553335 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
TMEM260-204ENST00000553335 M0QXV9 152 aa6.13□□□□□ -1.43
TMEM260-204ENST00000553335 CDK2AP2O75956 126 aa6.13□□□□□ -1.43
TMEM260-204ENST00000553335 VPREB1P12018 145 aa6.13□□□□□ -1.43
TMEM260-204ENST00000553335 XGP55808 180 aa6.13□□□□□ -1.43
TMEM260-204ENST00000553335 TRBV10-2A0A0K0K1G8 114 aa6.12□□□□□ -1.43
TMEM260-204ENST00000553335 M0R378 163 aa6.12□□□□□ -1.43
TMEM260-204ENST00000553335 HSD52Q0P140 79 aa6.12□□□□□ -1.43
TMEM260-204ENST00000553335 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
TMEM260-204ENST00000553335 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
TMEM260-204ENST00000553335 HERC2O95714 4834 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
TMEM260-204ENST00000553335 NCR3O14931 201 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 UBE2BP63146 152 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 HAMPP81172 84 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 CEND1Q8N111 149 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
TMEM260-204ENST00000553335 A4D1N5 150 aa6.1□□□□□ -1.43
TMEM260-204ENST00000553335 PRR3P79522 188 aaKnown RBP6.1□□□□□ -1.43
TMEM260-204ENST00000553335 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
TMEM260-204ENST00000553335 Q8NDZ9 215 aa6.1□□□□□ -1.43
TMEM260-204ENST00000553335 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
TMEM260-204ENST00000553335 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
TMEM260-204ENST00000553335 GAGE10A6NGK3 116 aa6.09□□□□□ -1.43
TMEM260-204ENST00000553335 OR13C6PQ8NH95 151 aa6.09□□□□□ -1.43
TMEM260-204ENST00000553335 CBY1Q9Y3M2 126 aa6.09□□□□□ -1.43
TMEM260-204ENST00000553335 TRAV13-2A0A0B4J235 113 aa6.08□□□□□ -1.44
TMEM260-204ENST00000553335 DDTP30046 118 aa6.08□□□□□ -1.44
TMEM260-204ENST00000553335 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
TMEM260-204ENST00000553335 IGLV1-50A0A075B6I6 118 aa6.07□□□□□ -1.44
TMEM260-204ENST00000553335 IGKV2-28A0A075B6P5 120 aa6.07□□□□□ -1.44
TMEM260-204ENST00000553335 A6NDN8 102 aa6.07□□□□□ -1.44
TMEM260-204ENST00000553335 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms