RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TMEM126AQ9H061 195 aa7.68□□□□□ -1.18
ACTN1-207ENST00000553290 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
ACTN1-207ENST00000553290 ATP6V1G1O75348 118 aa7.67□□□□□ -1.18
ACTN1-207ENST00000553290 SERF1AO75920 110 aa7.67□□□□□ -1.18
ACTN1-207ENST00000553290 HERV-K104P63124 156 aa7.67□□□□□ -1.18
ACTN1-207ENST00000553290 Q8NDZ9 215 aa7.67□□□□□ -1.18
ACTN1-207ENST00000553290 A0A087X002 238 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 TMEM238C9JI98 176 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 H0Y8G0 127 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 MEIG1Q5JSS6 88 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 FAM19A1Q7Z5A9 133 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
ACTN1-207ENST00000553290 M0R378 163 aa7.65□□□□□ -1.18
ACTN1-207ENST00000553290 LINC00310P59036 64 aa7.65□□□□□ -1.18
ACTN1-207ENST00000553290 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
ACTN1-207ENST00000553290 HSPB8Q9UJY1 196 aa7.65□□□□□ -1.18
ACTN1-207ENST00000553290 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
ACTN1-207ENST00000553290 COLCA2A8K830 154 aa7.64□□□□□ -1.19
ACTN1-207ENST00000553290 PLNP26678 52 aa7.64□□□□□ -1.19
ACTN1-207ENST00000553290 PRLHP81277 87 aa7.64□□□□□ -1.19
ACTN1-207ENST00000553290 FAM229BQ4G0N7 80 aa7.64□□□□□ -1.19
ACTN1-207ENST00000553290 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
ACTN1-207ENST00000553290 MIR7-3HGQ8N6C7 128 aa7.63□□□□□ -1.19
ACTN1-207ENST00000553290 MAP1LC3CQ9BXW4 147 aa7.63□□□□□ -1.19
ACTN1-207ENST00000553290 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
ACTN1-207ENST00000553290 LEPROTO15243 131 aa7.62□□□□□ -1.19
ACTN1-207ENST00000553290 FABP4P15090 132 aa7.62□□□□□ -1.19
ACTN1-207ENST00000553290 PRR4Q16378 134 aa7.62□□□□□ -1.19
ACTN1-207ENST00000553290 PLEKHB2Q96CS7 222 aa7.62□□□□□ -1.19
ACTN1-207ENST00000553290 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
ACTN1-207ENST00000553290 DPM2O94777 84 aa7.61□□□□□ -1.19
ACTN1-207ENST00000553290 TSPAN13O95857 204 aa7.61□□□□□ -1.19
ACTN1-207ENST00000553290 HERVK_113P61574 105 aa7.61□□□□□ -1.19
ACTN1-207ENST00000553290 PRYO14603 147 aa7.6□□□□□ -1.19
ACTN1-207ENST00000553290 IGKCP01834 107 aa7.6□□□□□ -1.19
ACTN1-207ENST00000553290 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
ACTN1-207ENST00000553290 J3QQQ9 107 aa7.59□□□□□ -1.19
ACTN1-207ENST00000553290 NCR3O14931 201 aa7.59□□□□□ -1.19
ACTN1-207ENST00000553290 NMUP48645 174 aa7.59□□□□□ -1.19
ACTN1-207ENST00000553290 TSPEAR-AS2P59090 65 aa7.59□□□□□ -1.19
ACTN1-207ENST00000553290 HIGD2AQ9BW72 106 aa7.59□□□□□ -1.19
ACTN1-207ENST00000553290 LPAP08519 4548 aa7.59□□□□□ -1.19
ACTN1-207ENST00000553290 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
ACTN1-207ENST00000553290 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
ACTN1-207ENST00000553290 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
ACTN1-207ENST00000553290 RNF213Q63HN8 5207 aa7.58□□□□□ -1.2
ACTN1-207ENST00000553290 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
ACTN1-207ENST00000553290 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
ACTN1-207ENST00000553290 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
ACTN1-207ENST00000553290 PMCHL2Q9BQD1 86 aa7.57□□□□□ -1.2
ACTN1-207ENST00000553290 SPRR1AP35321 89 aa7.56□□□□□ -1.2
ACTN1-207ENST00000553290 CTAG1AP78358 180 aa7.56□□□□□ -1.2
ACTN1-207ENST00000553290 S100A12P80511 92 aa7.56□□□□□ -1.2
ACTN1-207ENST00000553290 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
ACTN1-207ENST00000553290 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
ACTN1-207ENST00000553290 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
ACTN1-207ENST00000553290 DAND5Q8N907 189 aa7.55□□□□□ -1.2
ACTN1-207ENST00000553290 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
ACTN1-207ENST00000553290 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
ACTN1-207ENST00000553290 MIEN1Q9BRT3 115 aa7.54□□□□□ -1.2
ACTN1-207ENST00000553290 KRTAP4-16G5E9R7 235 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
ACTN1-207ENST00000553290 E9PLD3 99 aa7.52□□□□□ -1.21
ACTN1-207ENST00000553290 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
ACTN1-207ENST00000553290 NDUFC2O95298 119 aa7.52□□□□□ -1.21
ACTN1-207ENST00000553290 DDTP30046 118 aa7.52□□□□□ -1.21
ACTN1-207ENST00000553290 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
ACTN1-207ENST00000553290 SPANXB1Q9NS25 103 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-207ENST00000553290 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
ACTN1-207ENST00000553290 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
ACTN1-207ENST00000553290 SPAG11AQ6PDA7 123 aa7.5□□□□□ -1.21
ACTN1-207ENST00000553290 B5MCH6 92 aa7.49□□□□□ -1.21
ACTN1-207ENST00000553290 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
ACTN1-207ENST00000553290 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
ACTN1-207ENST00000553290 PET117Q6UWS5 81 aa7.49□□□□□ -1.21
ACTN1-207ENST00000553290 IGLV6-57P01721 117 aa7.47□□□□□ -1.21
ACTN1-207ENST00000553290 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
ACTN1-207ENST00000553290 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
ACTN1-207ENST00000553290 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
ACTN1-207ENST00000553290 NPC2P61916 151 aa7.46□□□□□ -1.22
ACTN1-207ENST00000553290 LINC00483Q53H64 154 aa7.46□□□□□ -1.22
ACTN1-207ENST00000553290 C4orf48Q5BLP8 95 aa7.46□□□□□ -1.22
ACTN1-207ENST00000553290 Q6ZRX8 168 aa7.46□□□□□ -1.22
ACTN1-207ENST00000553290 PPDPFQ9H3Y8 114 aa7.46□□□□□ -1.22
ACTN1-207ENST00000553290 CBY1Q9Y3M2 126 aa7.46□□□□□ -1.22
ACTN1-207ENST00000553290 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
ACTN1-207ENST00000553290 TIMM17BO60830 172 aa7.45□□□□□ -1.22
ACTN1-207ENST00000553290 JOSD1Q15040 202 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms