RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 C1orf64Q8NEQ6 169 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 STOML3Q8TAV4 291 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 HIST1H2BAQ96A08 127 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 IMMP2LQ96T52 175 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
ATXN3-217ENST00000553287 UBE2D4Q9Y2X8 147 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 V9GYY9 64 aa1.92□□□□□ -2.1
ATXN3-217ENST00000553287 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 G3V3Q6 166 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 SMKR1H3BMG3 65 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 I3L3M4 83 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 NDUFA1O15239 70 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 RPL28P46779 137 aaKnown RBP1.91□□□□□ -2.1
ATXN3-217ENST00000553287 S100A12P80511 92 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 Q5BKY6 102 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
ATXN3-217ENST00000553287 CBLN2Q8IUK8 224 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 MRAP2Q96G30 205 aa1.91□□□□□ -2.1
ATXN3-217ENST00000553287 CTXND1A0A1B0GTU2 59 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 MAP1LC3B2A6NCE7 125 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 NCR2O95944 276 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 CXCL1P09341 107 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 ZNF25P17030 456 aaPredicted RBP1.9□□□□□ -2.11
ATXN3-217ENST00000553287 LGALS3P17931 250 aaKnown RBP1.9□□□□□ -2.11
ATXN3-217ENST00000553287 RAB4AP20338 218 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 RPL39P62891 51 aaKnown RBP1.9□□□□□ -2.11
ATXN3-217ENST00000553287 COX6B2Q6YFQ2 88 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 MRPL55Q7Z7F7 128 aaKnown RBP1.9□□□□□ -2.11
ATXN3-217ENST00000553287 BOD1L2Q8IYS8 172 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 PSMG3Q9BT73 122 aaPredicted RBP1.9□□□□□ -2.11
ATXN3-217ENST00000553287 MAP1LC3BQ9GZQ8 125 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 C8orf17Q9NRJ1 99 aa1.9□□□□□ -2.11
ATXN3-217ENST00000553287 IGHV3OR16-9A0A0B4J2B5 98 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 C7orf77A4D0Y5 90 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 TMEM238C9JI98 176 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 NDUFC2-KCTD14E9PQ53 114 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 SSNA1O43805 119 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 NUPR1O60356 82 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 IFNA1P01562 189 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 TRGC1P0CF51 173 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 RPL35P42766 123 aaKnown RBP1.89□□□□□ -2.11
ATXN3-217ENST00000553287 TAL2Q16559 108 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 FAM229BQ4G0N7 80 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 CENPWQ5EE01 88 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
ATXN3-217ENST00000553287 MRPL52Q86TS9 123 aaKnown RBP1.89□□□□□ -2.11
ATXN3-217ENST00000553287 SPANXA2-OT1Q8N9U9 137 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 OR10D4PQ8NGN7 298 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 MED28Q9H204 178 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 TOMM7Q9P0U1 55 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 TNFSF18Q9UNG2 199 aa1.89□□□□□ -2.11
ATXN3-217ENST00000553287 ZNF727A8MUV8 499 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 UPK1BO75841 260 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 PET100P0DJ07 73 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 SERF2P84101 59 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 TMEM241Q24JQ0 296 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 Q6Q795 121 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 FAM19A1Q7Z5A9 133 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 PLEKHB2Q96CS7 222 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 ST20Q9HBF5 79 aa1.88□□□□□ -2.11
ATXN3-217ENST00000553287 TRBV20OR9-2A0A075B6H5 130 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 F2Z2F3 143 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 GATCO43716 136 aaKnown RBP1.87□□□□□ -2.11
ATXN3-217ENST00000553287 FCER1GP30273 86 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 POLR2KP53803 58 aaKnown RBP1.87□□□□□ -2.11
ATXN3-217ENST00000553287 RAB5BP61020 215 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 CCL20P78556 96 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 IFITM3Q01628 133 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 AKR1C8PQ5T2L2 129 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 AMN1Q8IY45 258 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 C9orf62Q8N4C0 152 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 FAM213BQ8TBF2 198 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 SFT2D1Q8WV19 159 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 PACRGQ96M98 296 aaPredicted RBP1.87□□□□□ -2.11
ATXN3-217ENST00000553287 NKX6-2Q9C056 277 aaPredicted RBP1.87□□□□□ -2.11
ATXN3-217ENST00000553287 BATF3Q9NR55 127 aa1.87□□□□□ -2.11
ATXN3-217ENST00000553287 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
ATXN3-217ENST00000553287 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 TRBV30A0A0K0K1B3 111 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 A6NDN8 102 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 RPS20P60866 119 aaKnown RBP1.86□□□□□ -2.11
ATXN3-217ENST00000553287 KCNRGQ8N5I3 272 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 SPRR4Q96PI1 79 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 CCDC32Q9BV29 185 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 GNG13Q9P2W3 67 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
ATXN3-217ENST00000553287 FXYD6-FXYD2A0A087WZ82 144 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 TRBV27A0A0K0K1C4 114 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 A0A1B0GVG6 124 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 TCAPO15273 167 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 PFDN1O60925 122 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 MT2AP02795 61 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 MT1FP04733 61 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 GNG4P50150 75 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 SPAG11AQ6PDA7 123 aa1.85□□□□□ -2.11
ATXN3-217ENST00000553287 FAM231DQ6ZW35 169 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms