RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 COX8AP10176 69 aa10.84□□□□□ -0.67
ITGA5-213ENST00000553071 FAM19A5Q7Z5A7 132 aaPredicted RBP10.84□□□□□ -0.67
ITGA5-213ENST00000553071 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
ITGA5-213ENST00000553071 NKAPP1Q8N9T2 125 aa10.83□□□□□ -0.68
ITGA5-213ENST00000553071 IGLV5-37A0A075B6J1 123 aa10.82□□□□□ -0.68
ITGA5-213ENST00000553071 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
ITGA5-213ENST00000553071 M0QXV9 152 aa10.82□□□□□ -0.68
ITGA5-213ENST00000553071 HAMPP81172 84 aa10.82□□□□□ -0.68
ITGA5-213ENST00000553071 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
ITGA5-213ENST00000553071 BIRC6Q9NR09 4857 aa10.81□□□□□ -0.68
ITGA5-213ENST00000553071 IFITM1P13164 125 aa10.81□□□□□ -0.68
ITGA5-213ENST00000553071 C22orf24Q9Y442 160 aa10.81□□□□□ -0.68
ITGA5-213ENST00000553071 ADAMTSL4-AS1Q5T5F5 129 aa10.8□□□□□ -0.68
ITGA5-213ENST00000553071 SERTAD4-AS1Q5TG53 156 aa10.8□□□□□ -0.68
ITGA5-213ENST00000553071 DAND5Q8N907 189 aa10.8□□□□□ -0.68
ITGA5-213ENST00000553071 LITAFQ99732 161 aa10.8□□□□□ -0.68
ITGA5-213ENST00000553071 SPANXDQ9BXN6 97 aa10.8□□□□□ -0.68
ITGA5-213ENST00000553071 SPANXCQ9NY87 97 aa10.8□□□□□ -0.68
ITGA5-213ENST00000553071 SMR3BP02814 79 aaPredicted RBP10.79□□□□□ -0.68
ITGA5-213ENST00000553071 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
ITGA5-213ENST00000553071 MRPL55Q7Z7F7 128 aaKnown RBP10.79□□□□□ -0.68
ITGA5-213ENST00000553071 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
ITGA5-213ENST00000553071 NDUFC2O95298 119 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 PLA2G1BP04054 148 aaKnown RBP10.78□□□□□ -0.68
ITGA5-213ENST00000553071 SMIM6P0DI80 62 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 VPREB1P12018 145 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 SRSF9Q13242 221 aaKnown RBP eCLIP10.78□□□□□ -0.68
ITGA5-213ENST00000553071 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 Q8N1X5 172 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 LINC00308Q8TCZ7 52 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 C14orf144Q96I85 54 aa10.78□□□□□ -0.68
ITGA5-213ENST00000553071 UBE2BP63146 152 aa10.77□□□□□ -0.69
ITGA5-213ENST00000553071 PHF5AQ7RTV0 110 aaKnown RBP10.77□□□□□ -0.69
ITGA5-213ENST00000553071 KRTAP7-1Q8IUC3 87 aa10.77□□□□□ -0.69
ITGA5-213ENST00000553071 SPANXB1Q9NS25 103 aaPredicted RBP10.77□□□□□ -0.69
ITGA5-213ENST00000553071 DNAH8Q96JB1 4490 aa10.77□□□□□ -0.69
ITGA5-213ENST00000553071 M0R378 163 aa10.76□□□□□ -0.69
ITGA5-213ENST00000553071 TRBV10-2A0A0K0K1G8 114 aa10.75□□□□□ -0.69
ITGA5-213ENST00000553071 LOC105371267A0A1B0GV96 52 aa10.75□□□□□ -0.69
ITGA5-213ENST00000553071 LINC00518Q8N0U6 118 aa10.74□□□□□ -0.69
ITGA5-213ENST00000553071 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
ITGA5-213ENST00000553071 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
ITGA5-213ENST00000553071 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
ITGA5-213ENST00000553071 KIAA1109Q2LD37 5005 aa10.72□□□□□ -0.69
ITGA5-213ENST00000553071 NPC2P61916 151 aa10.72□□□□□ -0.69
ITGA5-213ENST00000553071 CBY1Q9Y3M2 126 aa10.72□□□□□ -0.69
ITGA5-213ENST00000553071 APOBP04114 4563 aaKnown RBP10.72□□□□□ -0.69
ITGA5-213ENST00000553071 Q5VSD8 79 aa10.71□□□□□ -0.69
ITGA5-213ENST00000553071 SOSTDC1Q6X4U4 206 aa10.71□□□□□ -0.69
ITGA5-213ENST00000553071 HIST1H4GQ99525 98 aa10.71□□□□□ -0.69
ITGA5-213ENST00000553071 RYR1P21817 5038 aa10.7□□□□□ -0.7
ITGA5-213ENST00000553071 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
ITGA5-213ENST00000553071 UQCR10Q9UDW1 63 aa10.7□□□□□ -0.7
ITGA5-213ENST00000553071 GAGE10A6NGK3 116 aa10.69□□□□□ -0.7
ITGA5-213ENST00000553071 IGLV1-50A0A075B6I6 118 aa10.68□□□□□ -0.7
ITGA5-213ENST00000553071 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
ITGA5-213ENST00000553071 TAL2Q16559 108 aa10.68□□□□□ -0.7
ITGA5-213ENST00000553071 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
ITGA5-213ENST00000553071 Q8NDZ9 215 aa10.68□□□□□ -0.7
ITGA5-213ENST00000553071 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
ITGA5-213ENST00000553071 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
ITGA5-213ENST00000553071 NCR3O14931 201 aa10.67□□□□□ -0.7
ITGA5-213ENST00000553071 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
ITGA5-213ENST00000553071 IGKV2-28A0A075B6P5 120 aa10.65□□□□□ -0.7
ITGA5-213ENST00000553071 IGKV2D-28P01615 120 aa10.65□□□□□ -0.7
ITGA5-213ENST00000553071 DDTP30046 118 aa10.65□□□□□ -0.7
ITGA5-213ENST00000553071 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
ITGA5-213ENST00000553071 TMEM126AQ9H061 195 aa10.65□□□□□ -0.7
ITGA5-213ENST00000553071 HSPG2P98160 4391 aa10.64□□□□□ -0.71
ITGA5-213ENST00000553071 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 PRYO14603 147 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 IGLV6-57P01721 117 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 REG3GQ6UW15 175 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 C2orf91Q6ZV80 131 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 OR13C6PQ8NH95 151 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 KCNQ1DNQ9H478 68 aa10.63□□□□□ -0.71
ITGA5-213ENST00000553071 TRBV10-3A0A0K0K1G6 114 aa10.62□□□□□ -0.71
ITGA5-213ENST00000553071 BCE1O60756 84 aa10.62□□□□□ -0.71
ITGA5-213ENST00000553071 C12orf57Q99622 126 aa10.62□□□□□ -0.71
ITGA5-213ENST00000553071 KRTAP11-1Q8IUC1 163 aa10.61□□□□□ -0.71
ITGA5-213ENST00000553071 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
ITGA5-213ENST00000553071 A4D1N5 150 aa10.6□□□□□ -0.71
ITGA5-213ENST00000553071 A6NJY4 79 aa10.6□□□□□ -0.71
ITGA5-213ENST00000553071 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
ITGA5-213ENST00000553071 A6NDN8 102 aa10.59□□□□□ -0.71
ITGA5-213ENST00000553071 TSTD3H0UI37 97 aa10.59□□□□□ -0.71
ITGA5-213ENST00000553071 HINT1P49773 126 aaPredicted RBP10.59□□□□□ -0.71
ITGA5-213ENST00000553071 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
ITGA5-213ENST00000553071 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
ITGA5-213ENST00000553071 HSD52Q0P140 79 aa10.59□□□□□ -0.71
ITGA5-213ENST00000553071 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
ITGA5-213ENST00000553071 SPINK6Q6UWN8 80 aa10.58□□□□□ -0.72
ITGA5-213ENST00000553071 CEND1Q8N111 149 aa10.58□□□□□ -0.72
ITGA5-213ENST00000553071 TRAV23DV6A0A075B6W5 121 aa10.57□□□□□ -0.72
ITGA5-213ENST00000553071 UBE2AP49459 152 aa10.57□□□□□ -0.72
ITGA5-213ENST00000553071 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
ITGA5-213ENST00000553071 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
ITGA5-213ENST00000553071 ETDCA0A1B0GVM5 59 aa10.56□□□□□ -0.72
ITGA5-213ENST00000553071 ZNF861PO60384 105 aa10.56□□□□□ -0.72
ITGA5-213ENST00000553071 SPRR1AP35321 89 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms