RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TRAV12-1A0A0B4J245 112 aa7.35□□□□□ -1.23
CKAP4-202ENST00000552828 A6NDN8 102 aa7.35□□□□□ -1.23
CKAP4-202ENST00000552828 DPM2O94777 84 aa7.35□□□□□ -1.23
CKAP4-202ENST00000552828 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
CKAP4-202ENST00000552828 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
CKAP4-202ENST00000552828 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
CKAP4-202ENST00000552828 TOMM7Q9P0U1 55 aa7.35□□□□□ -1.23
CKAP4-202ENST00000552828 LOC107984640A0A0U1RRK4 108 aa7.34□□□□□ -1.23
CKAP4-202ENST00000552828 H3BRM9 83 aa7.34□□□□□ -1.23
CKAP4-202ENST00000552828 IGKCP01834 107 aa7.34□□□□□ -1.23
CKAP4-202ENST00000552828 C6orf226Q5I0X4 101 aa7.34□□□□□ -1.23
CKAP4-202ENST00000552828 UNQ6190/PRO20217Q6UXQ8 127 aa7.34□□□□□ -1.23
CKAP4-202ENST00000552828 CKS1BP61024 79 aa7.33□□□□□ -1.24
CKAP4-202ENST00000552828 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
CKAP4-202ENST00000552828 Q6ZRP5 223 aa7.33□□□□□ -1.24
CKAP4-202ENST00000552828 Q8IZM0 81 aa7.33□□□□□ -1.24
CKAP4-202ENST00000552828 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
CKAP4-202ENST00000552828 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
CKAP4-202ENST00000552828 TRBV30A0A0K0K1B3 111 aa7.32□□□□□ -1.24
CKAP4-202ENST00000552828 SMIM1B2RUZ4 78 aa7.32□□□□□ -1.24
CKAP4-202ENST00000552828 PLNP26678 52 aa7.32□□□□□ -1.24
CKAP4-202ENST00000552828 GAGE2BQ13066 116 aa7.32□□□□□ -1.24
CKAP4-202ENST00000552828 VAMP3Q15836 100 aa7.32□□□□□ -1.24
CKAP4-202ENST00000552828 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
CKAP4-202ENST00000552828 SPINK8P0C7L1 97 aa7.31□□□□□ -1.24
CKAP4-202ENST00000552828 C6orf48Q9UBA6 75 aa7.31□□□□□ -1.24
CKAP4-202ENST00000552828 C9orf118A6NHY6 69 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 ZNF22P17026 224 aaPredicted RBP7.3□□□□□ -1.24
CKAP4-202ENST00000552828 CXCL5P42830 114 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 NMUP48645 174 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 RPL18AQ02543 176 aaKnown RBP7.3□□□□□ -1.24
CKAP4-202ENST00000552828 TAL2Q16559 108 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 Q6ZVH6 145 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 COX7B2Q8TF08 81 aa7.3□□□□□ -1.24
CKAP4-202ENST00000552828 F8VRH5 84 aa7.29□□□□□ -1.24
CKAP4-202ENST00000552828 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
CKAP4-202ENST00000552828 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
CKAP4-202ENST00000552828 CBY1Q9Y3M2 126 aa7.29□□□□□ -1.24
CKAP4-202ENST00000552828 LPAP08519 4548 aa7.29□□□□□ -1.24
CKAP4-202ENST00000552828 GTF2H5Q6ZYL4 71 aa7.28□□□□□ -1.24
CKAP4-202ENST00000552828 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
CKAP4-202ENST00000552828 IGLV5-39A0A0G2JS06 123 aa7.27□□□□□ -1.25
CKAP4-202ENST00000552828 NDUFC2-KCTD14E9PQ53 114 aa7.27□□□□□ -1.25
CKAP4-202ENST00000552828 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
CKAP4-202ENST00000552828 C9orf116Q5BN46 136 aaPredicted RBP7.27□□□□□ -1.25
CKAP4-202ENST00000552828 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
CKAP4-202ENST00000552828 A0A1W2PNN7 141 aa7.26□□□□□ -1.25
CKAP4-202ENST00000552828 SMIM13P0DJ93 91 aa7.26□□□□□ -1.25
CKAP4-202ENST00000552828 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
CKAP4-202ENST00000552828 GAGE10A6NGK3 116 aa7.24□□□□□ -1.25
CKAP4-202ENST00000552828 K7EP34 96 aa7.24□□□□□ -1.25
CKAP4-202ENST00000552828 CEND1Q8N111 149 aa7.24□□□□□ -1.25
CKAP4-202ENST00000552828 PSORS1C2Q9UIG4 136 aa7.24□□□□□ -1.25
CKAP4-202ENST00000552828 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
CKAP4-202ENST00000552828 E9PLD3 99 aa7.23□□□□□ -1.25
CKAP4-202ENST00000552828 SFTA2Q6UW10 78 aa7.23□□□□□ -1.25
CKAP4-202ENST00000552828 MUC2Q02817 5179 aa7.23□□□□□ -1.25
CKAP4-202ENST00000552828 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
CKAP4-202ENST00000552828 H3BUT2 72 aa7.22□□□□□ -1.25
CKAP4-202ENST00000552828 A0A1B0GWB2 263 aa7.21□□□□□ -1.26
CKAP4-202ENST00000552828 FABP2P12104 132 aa7.21□□□□□ -1.26
CKAP4-202ENST00000552828 FXYD2P54710 66 aa7.21□□□□□ -1.26
CKAP4-202ENST00000552828 C9orf129Q5T035 196 aaKnown RBP7.21□□□□□ -1.26
CKAP4-202ENST00000552828 FAM168BA1KXE4 195 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 HERVK_113P61574 105 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 OCIAD2Q56VL3 154 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 C1orf137Q5JT78 98 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 TTTY13Q9BZ97 58 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 XAGE1AQ9HD64 81 aa7.2□□□□□ -1.26
CKAP4-202ENST00000552828 K7ERU9 68 aa7.19□□□□□ -1.26
CKAP4-202ENST00000552828 PFN2P35080 140 aa7.19□□□□□ -1.26
CKAP4-202ENST00000552828 COX17Q14061 63 aa7.19□□□□□ -1.26
CKAP4-202ENST00000552828 PHF5AQ7RTV0 110 aaKnown RBP7.19□□□□□ -1.26
CKAP4-202ENST00000552828 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
CKAP4-202ENST00000552828 ZNF625Q96I27 306 aaPredicted RBP7.19□□□□□ -1.26
CKAP4-202ENST00000552828 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
CKAP4-202ENST00000552828 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
CKAP4-202ENST00000552828 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
CKAP4-202ENST00000552828 DIRC1Q969H9 104 aa7.18□□□□□ -1.26
CKAP4-202ENST00000552828 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
CKAP4-202ENST00000552828 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
CKAP4-202ENST00000552828 LEPROTO15243 131 aa7.17□□□□□ -1.26
CKAP4-202ENST00000552828 PRR26Q8N8Z3 221 aa7.17□□□□□ -1.26
CKAP4-202ENST00000552828 RAB37Q96AX2 223 aa7.17□□□□□ -1.26
CKAP4-202ENST00000552828 NHP2Q9NX24 153 aaKnown RBP7.17□□□□□ -1.26
CKAP4-202ENST00000552828 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
CKAP4-202ENST00000552828 M0QXV9 152 aa7.16□□□□□ -1.26
CKAP4-202ENST00000552828 HERV-K104P63124 156 aa7.16□□□□□ -1.26
CKAP4-202ENST00000552828 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
CKAP4-202ENST00000552828 SPANXB1Q9NS25 103 aaPredicted RBP7.16□□□□□ -1.26
CKAP4-202ENST00000552828 NDUFA12Q9UI09 145 aa7.16□□□□□ -1.26
CKAP4-202ENST00000552828 ZNF815PA8K554 130 aa7.15□□□□□ -1.26
CKAP4-202ENST00000552828 H0Y9J4 135 aa7.15□□□□□ -1.26
CKAP4-202ENST00000552828 J3QQQ9 107 aa7.15□□□□□ -1.26
CKAP4-202ENST00000552828 LINC00158P58513 81 aa7.15□□□□□ -1.26
CKAP4-202ENST00000552828 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms