RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 A0A1B0GVG6 124 aa9.4□□□□□ -0.9
CACNB3-222ENST00000552465 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
CACNB3-222ENST00000552465 MT-ND4LP03901 98 aa9.4□□□□□ -0.9
CACNB3-222ENST00000552465 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
CACNB3-222ENST00000552465 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.9
CACNB3-222ENST00000552465 XP32Q5T750 250 aa9.39□□□□□ -0.91
CACNB3-222ENST00000552465 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
CACNB3-222ENST00000552465 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
CACNB3-222ENST00000552465 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
CACNB3-222ENST00000552465 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
CACNB3-222ENST00000552465 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
CACNB3-222ENST00000552465 MT1HP80294 61 aa9.36□□□□□ -0.91
CACNB3-222ENST00000552465 Q8N377 158 aa9.36□□□□□ -0.91
CACNB3-222ENST00000552465 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
CACNB3-222ENST00000552465 FAM19A2Q8N3H0 131 aa9.35□□□□□ -0.91
CACNB3-222ENST00000552465 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
CACNB3-222ENST00000552465 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
CACNB3-222ENST00000552465 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
CACNB3-222ENST00000552465 PRYO14603 147 aa9.32□□□□□ -0.92
CACNB3-222ENST00000552465 SLC25A20O43772 301 aa9.32□□□□□ -0.92
CACNB3-222ENST00000552465 SPRR1AP35321 89 aa9.32□□□□□ -0.92
CACNB3-222ENST00000552465 LINC00158P58513 81 aa9.31□□□□□ -0.92
CACNB3-222ENST00000552465 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
CACNB3-222ENST00000552465 SFTA2Q6UW10 78 aa9.31□□□□□ -0.92
CACNB3-222ENST00000552465 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
CACNB3-222ENST00000552465 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
CACNB3-222ENST00000552465 NDUFA6P56556 154 aa9.3□□□□□ -0.92
CACNB3-222ENST00000552465 MOBPQ13875 183 aa9.3□□□□□ -0.92
CACNB3-222ENST00000552465 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
CACNB3-222ENST00000552465 IGLV9-49A0A0B4J1Y8 123 aa9.29□□□□□ -0.92
CACNB3-222ENST00000552465 FA2HQ7L5A8 372 aa9.28□□□□□ -0.92
CACNB3-222ENST00000552465 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
CACNB3-222ENST00000552465 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
CACNB3-222ENST00000552465 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
CACNB3-222ENST00000552465 SMCO4Q9NRQ5 59 aa9.27□□□□□ -0.93
CACNB3-222ENST00000552465 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
CACNB3-222ENST00000552465 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
CACNB3-222ENST00000552465 BOD1L2Q8IYS8 172 aa9.25□□□□□ -0.93
CACNB3-222ENST00000552465 TRAV9-1A0A075B6T8 112 aa9.24□□□□□ -0.93
CACNB3-222ENST00000552465 NCR3O14931 201 aa9.24□□□□□ -0.93
CACNB3-222ENST00000552465 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
CACNB3-222ENST00000552465 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
CACNB3-222ENST00000552465 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
CACNB3-222ENST00000552465 A0A096LNJ9 63 aa9.23□□□□□ -0.93
CACNB3-222ENST00000552465 IGLV8-61A0A075B6I0 122 aa9.22□□□□□ -0.93
CACNB3-222ENST00000552465 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
CACNB3-222ENST00000552465 B5MCH6 92 aa9.22□□□□□ -0.93
CACNB3-222ENST00000552465 ATP6V1G1O75348 118 aa9.21□□□□□ -0.94
CACNB3-222ENST00000552465 SMIM13P0DJ93 91 aa9.21□□□□□ -0.94
CACNB3-222ENST00000552465 BAGE3Q86Y29 109 aa9.21□□□□□ -0.94
CACNB3-222ENST00000552465 S100A12P80511 92 aa9.18□□□□□ -0.94
CACNB3-222ENST00000552465 FABP9Q0Z7S8 132 aa9.18□□□□□ -0.94
CACNB3-222ENST00000552465 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
CACNB3-222ENST00000552465 Q9BRP9 147 aa9.18□□□□□ -0.94
CACNB3-222ENST00000552465 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
CACNB3-222ENST00000552465 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
CACNB3-222ENST00000552465 HBDP02042 147 aa9.16□□□□□ -0.94
CACNB3-222ENST00000552465 PMCHL1Q16048 86 aa9.16□□□□□ -0.94
CACNB3-222ENST00000552465 COX19Q49B96 90 aa9.16□□□□□ -0.94
CACNB3-222ENST00000552465 MEIG1Q5JSS6 88 aa9.16□□□□□ -0.94
CACNB3-222ENST00000552465 LINC00614P0C842 121 aa9.15□□□□□ -0.94
CACNB3-222ENST00000552465 C9orf153Q5TBE3 101 aa9.15□□□□□ -0.94
CACNB3-222ENST00000552465 CHTOPQ9Y3Y2 248 aaKnown RBP9.15□□□□□ -0.94
CACNB3-222ENST00000552465 S100PP25815 95 aa9.14□□□□□ -0.95
CACNB3-222ENST00000552465 Q6ZRX8 168 aa9.14□□□□□ -0.95
CACNB3-222ENST00000552465 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
CACNB3-222ENST00000552465 M0R2T5 61 aa9.13□□□□□ -0.95
CACNB3-222ENST00000552465 DDTP30046 118 aa9.12□□□□□ -0.95
CACNB3-222ENST00000552465 HERV-K104P63124 156 aa9.12□□□□□ -0.95
CACNB3-222ENST00000552465 LINC00587B1AMM8 73 aa9.11□□□□□ -0.95
CACNB3-222ENST00000552465 C18orf32Q8TCD1 76 aa9.11□□□□□ -0.95
CACNB3-222ENST00000552465 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
CACNB3-222ENST00000552465 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
CACNB3-222ENST00000552465 MAP1LC3CQ9BXW4 147 aa9.09□□□□□ -0.95
CACNB3-222ENST00000552465 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
CACNB3-222ENST00000552465 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
CACNB3-222ENST00000552465 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
CACNB3-222ENST00000552465 LIMD2Q9BT23 127 aa9.07□□□□□ -0.96
CACNB3-222ENST00000552465 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
CACNB3-222ENST00000552465 TMEM218A2RU14 115 aa9.06□□□□□ -0.96
CACNB3-222ENST00000552465 KRTAP9-7A8MTY7 169 aa9.06□□□□□ -0.96
CACNB3-222ENST00000552465 JOSD1Q15040 202 aaPredicted RBP9.06□□□□□ -0.96
CACNB3-222ENST00000552465 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
CACNB3-222ENST00000552465 HRCT1Q6UXD1 115 aa9.05□□□□□ -0.96
CACNB3-222ENST00000552465 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.04□□□□□ -0.96
CACNB3-222ENST00000552465 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
CACNB3-222ENST00000552465 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
CACNB3-222ENST00000552465 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
CACNB3-222ENST00000552465 S100A7L2Q5SY68 101 aa9.03□□□□□ -0.96
CACNB3-222ENST00000552465 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
CACNB3-222ENST00000552465 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
CACNB3-222ENST00000552465 UQCC3Q6UW78 93 aa9.02□□□□□ -0.97
CACNB3-222ENST00000552465 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
CACNB3-222ENST00000552465 CLLU1Q5K131 121 aa9.01□□□□□ -0.97
CACNB3-222ENST00000552465 IFI27L1Q96BM0 104 aa9.01□□□□□ -0.97
CACNB3-222ENST00000552465 ZNF73O43830 326 aaPredicted RBP9□□□□□ -0.97
CACNB3-222ENST00000552465 NDUFC2O95298 119 aa8.99□□□□□ -0.97
CACNB3-222ENST00000552465 SPRR1BP22528 89 aa8.99□□□□□ -0.97
CACNB3-222ENST00000552465 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
CACNB3-222ENST00000552465 RPS10P5Q9NQ39 176 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms