RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 DEFB135Q30KP9 77 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 CLPSL2Q6UWE3 100 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 LINC00336Q6ZUF6 198 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 NAV2Q8IVL1 2488 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 ZFHX3Q15911 3703 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 RELNP78509 3460 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 IGKV3D-7A0A0C4DH55 119 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 SLPIP03973 132 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 COX7BP24311 80 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 ELOF1P60002 83 aaKnown RBP3.63□□□□□ -1.83
CCNT1-204ENST00000551989 C9orf129Q5T035 196 aaKnown RBP3.63□□□□□ -1.83
CCNT1-204ENST00000551989 WFDC9Q8NEX5 89 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 UPK3BQ9BT76 320 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 LAMTOR3Q9UHA4 124 aa3.63□□□□□ -1.83
CCNT1-204ENST00000551989 NOTCH3Q9UM47 2321 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 A0A096LPF7 62 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 TRBV7-4A0A0J9YYF1 115 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 M0R378 163 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
CCNT1-204ENST00000551989 KRTAP10-3P60369 221 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 USP9YO00507 2555 aaPredicted RBP3.62□□□□□ -1.83
CCNT1-204ENST00000551989 CHD8Q9HCK8 2581 aa3.62□□□□□ -1.83
CCNT1-204ENST00000551989 FAM208BQ5VWN6 2430 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 IGLV10-54A0A075B6I4 117 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 NDUFC1O43677 76 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
CCNT1-204ENST00000551989 ENHOQ6UWT2 76 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 UNQ6190/PRO20217Q6UXQ8 127 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 Q6ZQY7 126 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 PIEZO1Q92508 2521 aa3.61□□□□□ -1.83
CCNT1-204ENST00000551989 PTPN13Q12923 2485 aa3.6□□□□□ -1.83
CCNT1-204ENST00000551989 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
CCNT1-204ENST00000551989 Q6ZVQ6 151 aa3.6□□□□□ -1.83
CCNT1-204ENST00000551989 SPATA3Q8NHX4 192 aa3.6□□□□□ -1.83
CCNT1-204ENST00000551989 CELA1Q9UNI1 258 aa3.6□□□□□ -1.83
CCNT1-204ENST00000551989 PLA2G2DQ9UNK4 145 aa3.6□□□□□ -1.83
CCNT1-204ENST00000551989 MYO9AB2RTY4 2548 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 A0A087WVE0 104 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 TLX1NBP0CAT3 122 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-204ENST00000551989 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
CCNT1-204ENST00000551989 KLKP1Q107X0 134 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.83
CCNT1-204ENST00000551989 LINC01556Q5JQF7 62 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 C10orf25Q5T742 122 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 IGSF10Q6WRI0 2623 aa3.59□□□□□ -1.83
CCNT1-204ENST00000551989 UBR5O95071 2799 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-204ENST00000551989 ITPR1Q14643 2758 aa3.58□□□□□ -1.84
CCNT1-204ENST00000551989 KPRPQ5T749 579 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-204ENST00000551989 KRTAP26-1Q6PEX3 210 aa3.58□□□□□ -1.84
CCNT1-204ENST00000551989 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-204ENST00000551989 Q8NDZ9 215 aa3.58□□□□□ -1.84
CCNT1-204ENST00000551989 DPH3Q96FX2 82 aa3.58□□□□□ -1.84
CCNT1-204ENST00000551989 RETNQ9HD89 108 aa3.58□□□□□ -1.84
CCNT1-204ENST00000551989 KMT2BQ9UMN6 2715 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-204ENST00000551989 ITPR3Q14573 2671 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 VPS13CQ709C8 3753 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 FAM236DA0A1B0GTK5 79 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 PRYO14603 147 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 FAM236CP0DP71 79 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 HTN3P15516 51 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 CD164Q04900 197 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 LRRK2Q5S007 2527 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 FAM19A1Q7Z5A9 133 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 RMI2Q96E14 147 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 KCNQ1DNQ9H478 68 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 DHRS4-AS1Q9P1J3 65 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 CELSR1Q9NYQ6 3014 aa3.57□□□□□ -1.84
CCNT1-204ENST00000551989 TLN2Q9Y4G6 2542 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 UTP20O75691 2785 aaKnown RBP3.56□□□□□ -1.84
CCNT1-204ENST00000551989 USP24Q9UPU5 2620 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 DEFB4AO15263 64 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 HAMPP81172 84 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 SYCNQ0VAF6 134 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 C3orf56Q8N813 242 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 NKAPP1Q8N9T2 125 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 ZNF462Q96JM2 2506 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 MYO18BQ8IUG5 2567 aa3.56□□□□□ -1.84
CCNT1-204ENST00000551989 SVEP1Q4LDE5 3571 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 TEX15Q9BXT5 2789 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 IGLV5-48A0A075B6I7 105 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 INAFM1C9JVW0 142 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 Q6ZRU5 148 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 WFDC10BQ8IUB3 73 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
CCNT1-204ENST00000551989 EPM2AB3EWF7 344 aa3.54□□□□□ -1.84
CCNT1-204ENST00000551989 H7BZZ5 65 aa3.54□□□□□ -1.84
CCNT1-204ENST00000551989 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCNT1-204ENST00000551989 HIGD2BQ4VC39 106 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms