RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 COX17Q14061 63 aa12.11□□□□□ -0.47
SMARCD1-212ENST00000551966 LCE2CQ5TA81 110 aa12.11□□□□□ -0.47
SMARCD1-212ENST00000551966 LINC01549A6NIU2 74 aa12.1□□□□□ -0.47
SMARCD1-212ENST00000551966 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
SMARCD1-212ENST00000551966 SPINK1P00995 79 aa12.08□□□□□ -0.48
SMARCD1-212ENST00000551966 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-212ENST00000551966 A0A1B0GVG6 124 aa12.06□□□□□ -0.48
SMARCD1-212ENST00000551966 ZNF706Q9Y5V0 76 aaPredicted RBP12.06□□□□□ -0.48
SMARCD1-212ENST00000551966 SMCR5Q8TEV8 140 aa12.04□□□□□ -0.48
SMARCD1-212ENST00000551966 NDUFA6P56556 154 aa12.01□□□□□ -0.49
SMARCD1-212ENST00000551966 KRTAP19-2Q3LHN2 52 aa12.01□□□□□ -0.49
SMARCD1-212ENST00000551966 Q8N377 158 aa12.01□□□□□ -0.49
SMARCD1-212ENST00000551966 SPRR1AP35321 89 aa12□□□□□ -0.49
SMARCD1-212ENST00000551966 XP32Q5T750 250 aa12□□□□□ -0.49
SMARCD1-212ENST00000551966 A0A096LNJ9 63 aa11.99□□□□□ -0.49
SMARCD1-212ENST00000551966 KRTAP4-16G5E9R7 235 aaPredicted RBP11.99□□□□□ -0.49
SMARCD1-212ENST00000551966 LINC00158P58513 81 aa11.99□□□□□ -0.49
SMARCD1-212ENST00000551966 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
SMARCD1-212ENST00000551966 FA2HQ7L5A8 372 aa11.99□□□□□ -0.49
SMARCD1-212ENST00000551966 A0A0U1RRA0 63 aa11.98□□□□□ -0.49
SMARCD1-212ENST00000551966 PRYO14603 147 aa11.97□□□□□ -0.49
SMARCD1-212ENST00000551966 C11orf86A6NJI1 115 aa11.96□□□□□ -0.49
SMARCD1-212ENST00000551966 KCNQ1DNQ9H478 68 aa11.96□□□□□ -0.49
SMARCD1-212ENST00000551966 SMCO4Q9NRQ5 59 aa11.96□□□□□ -0.49
SMARCD1-212ENST00000551966 TRAV9-1A0A075B6T8 112 aa11.95□□□□□ -0.5
SMARCD1-212ENST00000551966 RPS29P62273 56 aaKnown RBP11.95□□□□□ -0.5
SMARCD1-212ENST00000551966 MT1HP80294 61 aa11.95□□□□□ -0.5
SMARCD1-212ENST00000551966 GAGE2AQ6NT46 116 aa11.95□□□□□ -0.5
SMARCD1-212ENST00000551966 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
SMARCD1-212ENST00000551966 SFTA2Q6UW10 78 aa11.94□□□□□ -0.5
SMARCD1-212ENST00000551966 MOBPQ13875 183 aa11.93□□□□□ -0.5
SMARCD1-212ENST00000551966 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
SMARCD1-212ENST00000551966 SSBP3-AS1Q7Z2R9 100 aa11.93□□□□□ -0.5
SMARCD1-212ENST00000551966 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
SMARCD1-212ENST00000551966 IGLV9-49A0A0B4J1Y8 123 aa11.92□□□□□ -0.5
SMARCD1-212ENST00000551966 ERC2-IT1O76042 136 aa11.92□□□□□ -0.5
SMARCD1-212ENST00000551966 NCR3O14931 201 aa11.91□□□□□ -0.5
SMARCD1-212ENST00000551966 SLC25A20O43772 301 aa11.91□□□□□ -0.5
SMARCD1-212ENST00000551966 BOD1L2Q8IYS8 172 aa11.91□□□□□ -0.5
SMARCD1-212ENST00000551966 FAM19A2Q8N3H0 131 aa11.91□□□□□ -0.5
SMARCD1-212ENST00000551966 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
SMARCD1-212ENST00000551966 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
SMARCD1-212ENST00000551966 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
SMARCD1-212ENST00000551966 SMIM13P0DJ93 91 aa11.89□□□□□ -0.51
SMARCD1-212ENST00000551966 TRBV10-3A0A0K0K1G6 114 aa11.88□□□□□ -0.51
SMARCD1-212ENST00000551966 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
SMARCD1-212ENST00000551966 B5MCH6 92 aa11.87□□□□□ -0.51
SMARCD1-212ENST00000551966 LINC00614P0C842 121 aa11.86□□□□□ -0.51
SMARCD1-212ENST00000551966 HBDP02042 147 aa11.85□□□□□ -0.51
SMARCD1-212ENST00000551966 MIR7-3HGQ8N6C7 128 aa11.85□□□□□ -0.51
SMARCD1-212ENST00000551966 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
SMARCD1-212ENST00000551966 ATP6V1G1O75348 118 aa11.83□□□□□ -0.52
SMARCD1-212ENST00000551966 LORP23490 312 aaPredicted RBP11.83□□□□□ -0.52
SMARCD1-212ENST00000551966 S100PP25815 95 aa11.83□□□□□ -0.52
SMARCD1-212ENST00000551966 COX19Q49B96 90 aa11.83□□□□□ -0.52
SMARCD1-212ENST00000551966 Q9BRP9 147 aa11.83□□□□□ -0.52
SMARCD1-212ENST00000551966 CFC1BP0CG36 223 aa11.82□□□□□ -0.52
SMARCD1-212ENST00000551966 C18orf32Q8TCD1 76 aa11.82□□□□□ -0.52
SMARCD1-212ENST00000551966 CHTOPQ9Y3Y2 248 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-212ENST00000551966 PCOTHQ58A44 107 aa11.81□□□□□ -0.52
SMARCD1-212ENST00000551966 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
SMARCD1-212ENST00000551966 MEIG1Q5JSS6 88 aa11.8□□□□□ -0.52
SMARCD1-212ENST00000551966 KRTAP10-6P60371 365 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-212ENST00000551966 IGLV8-61A0A075B6I0 122 aa11.78□□□□□ -0.52
SMARCD1-212ENST00000551966 SEC11CQ9BY50 192 aa11.78□□□□□ -0.52
SMARCD1-212ENST00000551966 CLLU1Q5K131 121 aa11.75□□□□□ -0.53
SMARCD1-212ENST00000551966 Q6ZRX8 168 aa11.75□□□□□ -0.53
SMARCD1-212ENST00000551966 DDTP30046 118 aa11.74□□□□□ -0.53
SMARCD1-212ENST00000551966 HERV-K104P63124 156 aa11.74□□□□□ -0.53
SMARCD1-212ENST00000551966 S100A12P80511 92 aa11.73□□□□□ -0.53
SMARCD1-212ENST00000551966 C9orf153Q5TBE3 101 aa11.73□□□□□ -0.53
SMARCD1-212ENST00000551966 LOC107984156A0A0G2JMH3 177 aa11.72□□□□□ -0.53
SMARCD1-212ENST00000551966 UQCC3Q6UW78 93 aa11.72□□□□□ -0.53
SMARCD1-212ENST00000551966 ARL17AQ8IVW1 177 aa11.72□□□□□ -0.53
SMARCD1-212ENST00000551966 TRAV12-1A0A0B4J245 112 aa11.71□□□□□ -0.53
SMARCD1-212ENST00000551966 TRAPPC1Q9Y5R8 145 aa11.71□□□□□ -0.53
SMARCD1-212ENST00000551966 TRBV10-2A0A0K0K1G8 114 aa11.7□□□□□ -0.54
SMARCD1-212ENST00000551966 C9orf92A6NGG3 77 aa11.7□□□□□ -0.54
SMARCD1-212ENST00000551966 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
SMARCD1-212ENST00000551966 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
SMARCD1-212ENST00000551966 MYMXA0A1B0GTQ4 84 aa11.67□□□□□ -0.54
SMARCD1-212ENST00000551966 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
SMARCD1-212ENST00000551966 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
SMARCD1-212ENST00000551966 IGLV6-57P01721 117 aa11.66□□□□□ -0.54
SMARCD1-212ENST00000551966 RPS10P5Q9NQ39 176 aa11.65□□□□□ -0.54
SMARCD1-212ENST00000551966 TSPEAR-AS2P59090 65 aa11.64□□□□□ -0.55
SMARCD1-212ENST00000551966 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
SMARCD1-212ENST00000551966 JOSD1Q15040 202 aaPredicted RBP11.62□□□□□ -0.55
SMARCD1-212ENST00000551966 SPANXB1Q9NS25 103 aaPredicted RBP11.62□□□□□ -0.55
SMARCD1-212ENST00000551966 C10orf91Q5T1B1 145 aa11.61□□□□□ -0.55
SMARCD1-212ENST00000551966 TRAV23DV6A0A075B6W5 121 aa11.6□□□□□ -0.55
SMARCD1-212ENST00000551966 M0R2T5 61 aa11.6□□□□□ -0.55
SMARCD1-212ENST00000551966 RHEBQ15382 184 aa11.6□□□□□ -0.55
SMARCD1-212ENST00000551966 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
SMARCD1-212ENST00000551966 LIMD2Q9BT23 127 aa11.59□□□□□ -0.55
SMARCD1-212ENST00000551966 ZNF73O43830 326 aaPredicted RBP11.58□□□□□ -0.56
SMARCD1-212ENST00000551966 NDUFC2O95298 119 aa11.58□□□□□ -0.56
SMARCD1-212ENST00000551966 C5orf52A6NGY3 159 aa11.57□□□□□ -0.56
SMARCD1-212ENST00000551966 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
SMARCD1-212ENST00000551966 SPRR1BP22528 89 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms