RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
NEK3-203ENST00000551355 BVES-AS1Q5T3Y7 98 aa6.7□□□□□ -1.34
NEK3-203ENST00000551355 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
NEK3-203ENST00000551355 PLA2G2DQ9UNK4 145 aa6.7□□□□□ -1.34
NEK3-203ENST00000551355 A6NDN8 102 aa6.69□□□□□ -1.34
NEK3-203ENST00000551355 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
NEK3-203ENST00000551355 XAGE1AQ9HD64 81 aa6.69□□□□□ -1.34
NEK3-203ENST00000551355 A4D1N5 150 aa6.68□□□□□ -1.34
NEK3-203ENST00000551355 NPC2P61916 151 aa6.68□□□□□ -1.34
NEK3-203ENST00000551355 C21orf62-AS1Q17RA5 79 aa6.68□□□□□ -1.34
NEK3-203ENST00000551355 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
NEK3-203ENST00000551355 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
NEK3-203ENST00000551355 FXYD2P54710 66 aa6.67□□□□□ -1.34
NEK3-203ENST00000551355 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
NEK3-203ENST00000551355 A0A096LNI7 61 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 A0A0B4J2C4 111 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 CBY1Q9Y3M2 126 aa6.66□□□□□ -1.34
NEK3-203ENST00000551355 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.34
NEK3-203ENST00000551355 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.34
NEK3-203ENST00000551355 IGKV2-24A0A0C4DH68 120 aa6.65□□□□□ -1.34
NEK3-203ENST00000551355 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
NEK3-203ENST00000551355 NHP2Q9NX24 153 aaKnown RBP6.65□□□□□ -1.34
NEK3-203ENST00000551355 DNAH2Q9P225 4427 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 M0R378 163 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 CFC1P0CG37 223 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 VPREB1P12018 145 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 BATFQ16520 125 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 SNHG12Q9BXW3 62 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 PRO1854Q9UHT4 67 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
NEK3-203ENST00000551355 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
NEK3-203ENST00000551355 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
NEK3-203ENST00000551355 LBHQ53QV2 105 aaPredicted RBP6.63□□□□□ -1.35
NEK3-203ENST00000551355 COL5A1-AS1Q5SY13 56 aa6.63□□□□□ -1.35
NEK3-203ENST00000551355 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
NEK3-203ENST00000551355 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
NEK3-203ENST00000551355 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
NEK3-203ENST00000551355 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
NEK3-203ENST00000551355 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
NEK3-203ENST00000551355 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
NEK3-203ENST00000551355 EPM2AB3EWF7 344 aa6.61□□□□□ -1.35
NEK3-203ENST00000551355 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
NEK3-203ENST00000551355 NCR3O14931 201 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 IGLV6-57P01721 117 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 FUSP35637 526 aaKnown RBP eCLIP6.6□□□□□ -1.35
NEK3-203ENST00000551355 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 FAM19A5Q7Z5A7 132 aaPredicted RBP6.6□□□□□ -1.35
NEK3-203ENST00000551355 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
NEK3-203ENST00000551355 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 PLAC8Q9NZF1 115 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
NEK3-203ENST00000551355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
NEK3-203ENST00000551355 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
NEK3-203ENST00000551355 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
NEK3-203ENST00000551355 M0QXV9 152 aa6.59□□□□□ -1.35
NEK3-203ENST00000551355 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
NEK3-203ENST00000551355 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
NEK3-203ENST00000551355 Q6ZSA8 131 aa6.59□□□□□ -1.35
NEK3-203ENST00000551355 Q8NDZ9 215 aa6.59□□□□□ -1.35
NEK3-203ENST00000551355 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.35
NEK3-203ENST00000551355 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.35
NEK3-203ENST00000551355 A0A087WYN8 130 aa6.58□□□□□ -1.36
NEK3-203ENST00000551355 K7ERJ3 54 aa6.58□□□□□ -1.36
NEK3-203ENST00000551355 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
NEK3-203ENST00000551355 Q1RN00 199 aa6.58□□□□□ -1.36
NEK3-203ENST00000551355 FRAS1Q86XX4 4008 aa6.57□□□□□ -1.36
NEK3-203ENST00000551355 KRTAP7-1Q8IUC3 87 aa6.57□□□□□ -1.36
NEK3-203ENST00000551355 C7orf33Q8WU49 177 aa6.57□□□□□ -1.36
NEK3-203ENST00000551355 RYR2Q92736 4967 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 PANO1I0J062 215 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 COX6CP09669 75 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
NEK3-203ENST00000551355 LYRM7Q5U5X0 104 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 LINC00167Q96N53 147 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 KCNQ1DNQ9H478 68 aa6.56□□□□□ -1.36
NEK3-203ENST00000551355 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 H7C2G1 150 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 PRYO14603 147 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 TAX1BP3O14907 124 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 TSPAN13O95857 204 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 VAMP3Q15836 100 aa6.55□□□□□ -1.36
NEK3-203ENST00000551355 TRBV7-6A0A0J9YX20 115 aa6.54□□□□□ -1.36
NEK3-203ENST00000551355 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
NEK3-203ENST00000551355 PSMB2P49721 201 aa6.54□□□□□ -1.36
NEK3-203ENST00000551355 UBE2BP63146 152 aa6.54□□□□□ -1.36
NEK3-203ENST00000551355 SMIM11BQ8TCY0 68 aa6.54□□□□□ -1.36
NEK3-203ENST00000551355 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
NEK3-203ENST00000551355 ZNF73O43830 326 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 1645.7 ms