RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 RAB14P61106 215 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 HERVK_113P63121 156 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 PAPPA-AS1Q5QFB9 102 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 LINC01561Q8N1V8 128 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 SCGB3A1Q96QR1 104 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 PPDPFQ9H3Y8 114 aa3.9□□□□□ -1.79
PRPF40B-214ENST00000551320 IGKV2D-26A0A0A0MRZ7 120 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 ORMDL2Q53FV1 153 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 ATP5L2Q7Z4Y8 100 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 FAM19A3Q7Z5A8 133 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 TOMM6Q96B49 74 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 CST9LQ9H4G1 147 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 TP73-AS1Q9UF72 201 aa3.89□□□□□ -1.79
PRPF40B-214ENST00000551320 M0R378 163 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 VPREB1P12018 145 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 NDUFA6P56556 154 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 PMCHL1Q16048 86 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 TMEM126AQ9H061 195 aa3.88□□□□□ -1.79
PRPF40B-214ENST00000551320 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 TINCRA0A1B0GVN0 87 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 PDZD11Q5EBL8 140 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 ERASQ7Z444 233 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 TIMM17AQ99595 171 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 SND1-IT1Q9HBX3 110 aa3.87□□□□□ -1.79
PRPF40B-214ENST00000551320 MT-ND4LP03901 98 aa3.86□□□□□ -1.79
PRPF40B-214ENST00000551320 CBLN2Q8IUK8 224 aa3.86□□□□□ -1.79
PRPF40B-214ENST00000551320 NXT2Q9NPJ8 142 aaKnown RBP3.86□□□□□ -1.79
PRPF40B-214ENST00000551320 LAMTOR2Q9Y2Q5 125 aa3.86□□□□□ -1.79
PRPF40B-214ENST00000551320 IGLV5-45A0A087WSX0 123 aa3.85□□□□□ -1.79
PRPF40B-214ENST00000551320 ZNF22P17026 224 aaPredicted RBP3.85□□□□□ -1.79
PRPF40B-214ENST00000551320 SEC61BP60468 96 aaKnown RBP3.85□□□□□ -1.79
PRPF40B-214ENST00000551320 FAM229BQ4G0N7 80 aa3.85□□□□□ -1.79
PRPF40B-214ENST00000551320 Q8NBF4 154 aa3.85□□□□□ -1.79
PRPF40B-214ENST00000551320 ERG28Q9UKR5 140 aa3.85□□□□□ -1.79
PRPF40B-214ENST00000551320 A0A096LNJ9 63 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 NCR3O14931 201 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 ATP5LO75964 103 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 CXCL5P42830 114 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 SEC11AP67812 179 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 PMVKQ15126 192 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 KRTAP13-3Q3SY46 172 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 SPRR4Q96PI1 79 aa3.84□□□□□ -1.79
PRPF40B-214ENST00000551320 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
PRPF40B-214ENST00000551320 LINC00337Q8N6G1 96 aa3.83□□□□□ -1.8
PRPF40B-214ENST00000551320 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 ERC2-IT1O76042 136 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 IGLC3P0DOY3 106 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 LINC00158P58513 81 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 FABP9Q0Z7S8 132 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 TMEM170BQ5T4T1 132 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 FA2HQ7L5A8 372 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 SMCR5Q8TEV8 140 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
PRPF40B-214ENST00000551320 H3BRM9 83 aa3.81□□□□□ -1.8
PRPF40B-214ENST00000551320 SMIM13P0DJ93 91 aa3.81□□□□□ -1.8
PRPF40B-214ENST00000551320 LINC01547P58512 204 aaPredicted RBP3.81□□□□□ -1.8
PRPF40B-214ENST00000551320 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
PRPF40B-214ENST00000551320 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
PRPF40B-214ENST00000551320 LINC01546A6NGU7 62 aa3.8□□□□□ -1.8
PRPF40B-214ENST00000551320 K7EMI3 77 aa3.8□□□□□ -1.8
PRPF40B-214ENST00000551320 MOBPQ13875 183 aa3.8□□□□□ -1.8
PRPF40B-214ENST00000551320 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
PRPF40B-214ENST00000551320 BAGE3Q86Y29 109 aa3.8□□□□□ -1.8
PRPF40B-214ENST00000551320 TRBV10-3A0A0K0K1G6 114 aa3.79□□□□□ -1.8
PRPF40B-214ENST00000551320 RPL24P83731 157 aaKnown RBP3.79□□□□□ -1.8
PRPF40B-214ENST00000551320 BOD1L2Q8IYS8 172 aa3.79□□□□□ -1.8
PRPF40B-214ENST00000551320 TMEM218A2RU14 115 aa3.78□□□□□ -1.8
PRPF40B-214ENST00000551320 G0S2P27469 103 aa3.78□□□□□ -1.8
PRPF40B-214ENST00000551320 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
PRPF40B-214ENST00000551320 MIR7-3HGQ8N6C7 128 aa3.78□□□□□ -1.8
PRPF40B-214ENST00000551320 C18orf32Q8TCD1 76 aa3.78□□□□□ -1.8
PRPF40B-214ENST00000551320 GNB1LQ9BYB4 327 aa3.78□□□□□ -1.8
PRPF40B-214ENST00000551320 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 KRTAP4-16G5E9R7 235 aaPredicted RBP3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 H0Y8G0 127 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 TSPEAR-AS2P59090 65 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 HRCT1Q6UXD1 115 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 Q8N377 158 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 Q9BRP9 147 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 RPS10P5Q9NQ39 176 aa3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 CHTOPQ9Y3Y2 248 aaKnown RBP3.77□□□□□ -1.81
PRPF40B-214ENST00000551320 ETDCA0A1B0GVM5 59 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 TMEM223A0PJW6 202 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 LINC00614P0C842 121 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 NPC2P61916 151 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 MT1HP80294 61 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 IFITM2Q01629 132 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 MEIG1Q5JSS6 88 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 SPAG11AQ6PDA7 123 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 ST20-AS1Q8NBB2 130 aa3.76□□□□□ -1.81
PRPF40B-214ENST00000551320 HBDP02042 147 aa3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 S100PP25815 95 aa3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 UBE2V1Q13404 147 aa3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 COX17Q14061 63 aa3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 PCOTHQ58A44 107 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms