RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
CACNB3-218ENST00000550771 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
CACNB3-218ENST00000550771 SFTA2Q6UW10 78 aa11.9□□□□□ -0.5
CACNB3-218ENST00000550771 FAT4Q6V0I7 4981 aa11.9□□□□□ -0.5
CACNB3-218ENST00000550771 NDUFA6P56556 154 aa11.89□□□□□ -0.51
CACNB3-218ENST00000550771 CBLN2Q8IUK8 224 aa11.89□□□□□ -0.51
CACNB3-218ENST00000550771 A0A096LNJ9 63 aa11.88□□□□□ -0.51
CACNB3-218ENST00000550771 Q8NDZ9 215 aa11.87□□□□□ -0.51
CACNB3-218ENST00000550771 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
CACNB3-218ENST00000550771 SPAG11AQ6PDA7 123 aa11.86□□□□□ -0.51
CACNB3-218ENST00000550771 C3orf22Q8N5N4 141 aa11.86□□□□□ -0.51
CACNB3-218ENST00000550771 HBDP02042 147 aa11.84□□□□□ -0.51
CACNB3-218ENST00000550771 LINC00614P0C842 121 aa11.84□□□□□ -0.51
CACNB3-218ENST00000550771 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
CACNB3-218ENST00000550771 PPDPFQ9H3Y8 114 aa11.84□□□□□ -0.51
CACNB3-218ENST00000550771 C11orf86A6NJI1 115 aa11.83□□□□□ -0.52
CACNB3-218ENST00000550771 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
CACNB3-218ENST00000550771 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
CACNB3-218ENST00000550771 SPRR4Q96PI1 79 aa11.82□□□□□ -0.52
CACNB3-218ENST00000550771 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
CACNB3-218ENST00000550771 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
CACNB3-218ENST00000550771 FP248Q71RG6 208 aaPredicted RBP11.8□□□□□ -0.52
CACNB3-218ENST00000550771 LINC00158P58513 81 aa11.79□□□□□ -0.52
CACNB3-218ENST00000550771 ZNF706Q9Y5V0 76 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-218ENST00000550771 PMCHL1Q16048 86 aa11.78□□□□□ -0.52
CACNB3-218ENST00000550771 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.53
CACNB3-218ENST00000550771 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
CACNB3-218ENST00000550771 CHTOPQ9Y3Y2 248 aaKnown RBP11.75□□□□□ -0.53
CACNB3-218ENST00000550771 PRYO14603 147 aa11.74□□□□□ -0.53
CACNB3-218ENST00000550771 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
CACNB3-218ENST00000550771 TMEM223A0PJW6 202 aa11.73□□□□□ -0.53
CACNB3-218ENST00000550771 SPRR1AP35321 89 aa11.73□□□□□ -0.53
CACNB3-218ENST00000550771 LINC00337Q8N6G1 96 aa11.73□□□□□ -0.53
CACNB3-218ENST00000550771 BOD1L2Q8IYS8 172 aa11.71□□□□□ -0.53
CACNB3-218ENST00000550771 Q8NBF4 154 aa11.71□□□□□ -0.53
CACNB3-218ENST00000550771 KCNQ1DNQ9H478 68 aa11.71□□□□□ -0.53
CACNB3-218ENST00000550771 ATP6V1G1O75348 118 aa11.7□□□□□ -0.54
CACNB3-218ENST00000550771 KRTAP13-3Q3SY46 172 aa11.7□□□□□ -0.54
CACNB3-218ENST00000550771 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
CACNB3-218ENST00000550771 KRTAP4-16G5E9R7 235 aaPredicted RBP11.69□□□□□ -0.54
CACNB3-218ENST00000550771 SPINK1P00995 79 aa11.69□□□□□ -0.54
CACNB3-218ENST00000550771 SMIM13P0DJ93 91 aa11.69□□□□□ -0.54
CACNB3-218ENST00000550771 DAND5Q8N907 189 aa11.69□□□□□ -0.54
CACNB3-218ENST00000550771 SMCR5Q8TEV8 140 aa11.69□□□□□ -0.54
CACNB3-218ENST00000550771 KRTAP9-6A0A140TA67 174 aa11.68□□□□□ -0.54
CACNB3-218ENST00000550771 HERV-K104P63124 156 aa11.67□□□□□ -0.54
CACNB3-218ENST00000550771 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
CACNB3-218ENST00000550771 LINC00483Q53H64 154 aa11.67□□□□□ -0.54
CACNB3-218ENST00000550771 MEIG1Q5JSS6 88 aa11.67□□□□□ -0.54
CACNB3-218ENST00000550771 MIR7-3HGQ8N6C7 128 aa11.67□□□□□ -0.54
CACNB3-218ENST00000550771 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
CACNB3-218ENST00000550771 ETDCA0A1B0GVM5 59 aa11.66□□□□□ -0.54
CACNB3-218ENST00000550771 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
CACNB3-218ENST00000550771 NCR3O14931 201 aa11.66□□□□□ -0.54
CACNB3-218ENST00000550771 IFI27L1Q96BM0 104 aa11.66□□□□□ -0.54
CACNB3-218ENST00000550771 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
CACNB3-218ENST00000550771 TRBV10-3A0A0K0K1G6 114 aa11.63□□□□□ -0.55
CACNB3-218ENST00000550771 S100A1P23297 94 aa11.63□□□□□ -0.55
CACNB3-218ENST00000550771 S100A12P80511 92 aa11.62□□□□□ -0.55
CACNB3-218ENST00000550771 RPS29P62273 56 aaKnown RBP11.61□□□□□ -0.55
CACNB3-218ENST00000550771 MAP1LC3CQ9BXW4 147 aa11.61□□□□□ -0.55
CACNB3-218ENST00000550771 NDUFA12Q9UI09 145 aa11.61□□□□□ -0.55
CACNB3-218ENST00000550771 GAGE2AQ6NT46 116 aa11.6□□□□□ -0.55
CACNB3-218ENST00000550771 MYMXA0A1B0GTQ4 84 aa11.59□□□□□ -0.55
CACNB3-218ENST00000550771 B5MCH6 92 aa11.59□□□□□ -0.55
CACNB3-218ENST00000550771 SEC61BP60468 96 aaKnown RBP11.59□□□□□ -0.55
CACNB3-218ENST00000550771 SSBP3-AS1Q7Z2R9 100 aa11.59□□□□□ -0.55
CACNB3-218ENST00000550771 COLCA2A8K830 154 aa11.58□□□□□ -0.56
CACNB3-218ENST00000550771 FAM19A2Q8N3H0 131 aa11.58□□□□□ -0.56
CACNB3-218ENST00000550771 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
CACNB3-218ENST00000550771 LINC01547P58512 204 aaPredicted RBP11.57□□□□□ -0.56
CACNB3-218ENST00000550771 MOBPQ13875 183 aa11.57□□□□□ -0.56
CACNB3-218ENST00000550771 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
CACNB3-218ENST00000550771 TRBV10-2A0A0K0K1G8 114 aa11.56□□□□□ -0.56
CACNB3-218ENST00000550771 TRGC2P03986 189 aa11.56□□□□□ -0.56
CACNB3-218ENST00000550771 Q8N377 158 aa11.56□□□□□ -0.56
CACNB3-218ENST00000550771 IGLV9-49A0A0B4J1Y8 123 aa11.55□□□□□ -0.56
CACNB3-218ENST00000550771 ERC2-IT1O76042 136 aa11.55□□□□□ -0.56
CACNB3-218ENST00000550771 DDTP30046 118 aa11.54□□□□□ -0.56
CACNB3-218ENST00000550771 KRTAP4-1Q9BYQ7 146 aa11.54□□□□□ -0.56
CACNB3-218ENST00000550771 Q6ZRX8 168 aa11.53□□□□□ -0.56
CACNB3-218ENST00000550771 Q9BRP9 147 aa11.53□□□□□ -0.56
CACNB3-218ENST00000550771 SLC25A20O43772 301 aa11.52□□□□□ -0.57
CACNB3-218ENST00000550771 HSBP1O75506 76 aa11.52□□□□□ -0.57
CACNB3-218ENST00000550771 TSPEAR-AS2P59090 65 aa11.51□□□□□ -0.57
CACNB3-218ENST00000550771 LEPROTO15243 131 aa11.5□□□□□ -0.57
CACNB3-218ENST00000550771 SPANXB1Q9NS25 103 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-218ENST00000550771 H0Y8G0 127 aa11.47□□□□□ -0.57
CACNB3-218ENST00000550771 NDUFC2O95298 119 aa11.47□□□□□ -0.57
CACNB3-218ENST00000550771 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
CACNB3-218ENST00000550771 XP32Q5T750 250 aa11.47□□□□□ -0.57
CACNB3-218ENST00000550771 MIEN1Q9BRT3 115 aa11.47□□□□□ -0.57
CACNB3-218ENST00000550771 PLNP26678 52 aa11.46□□□□□ -0.57
CACNB3-218ENST00000550771 JOSD1Q15040 202 aaPredicted RBP11.46□□□□□ -0.57
CACNB3-218ENST00000550771 J3QQQ9 107 aa11.45□□□□□ -0.58
CACNB3-218ENST00000550771 LEPROTL1O95214 131 aa11.45□□□□□ -0.58
CACNB3-218ENST00000550771 NMUP48645 174 aa11.45□□□□□ -0.58
CACNB3-218ENST00000550771 S100A7L2Q5SY68 101 aa11.45□□□□□ -0.58
CACNB3-218ENST00000550771 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
CACNB3-218ENST00000550771 TRAV23DV6A0A075B6W5 121 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms