RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 IGLV5-45A0A087WSX0 123 aa11.17□□□□□ -0.62
RBFOX1-212ENST00000550418 A0A1B0GUV1 79 aa11.17□□□□□ -0.62
RBFOX1-212ENST00000550418 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-212ENST00000550418 MAP1AP78559 2803 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-212ENST00000550418 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
RBFOX1-212ENST00000550418 COL6A3P12111 3177 aa11.16□□□□□ -0.62
RBFOX1-212ENST00000550418 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
RBFOX1-212ENST00000550418 IGHV3OR16-9A0A0B4J2B5 98 aa11.15□□□□□ -0.62
RBFOX1-212ENST00000550418 F8P00451 2351 aa11.14□□□□□ -0.63
RBFOX1-212ENST00000550418 EYSQ5T1H1 3165 aa11.14□□□□□ -0.63
RBFOX1-212ENST00000550418 LINC01561Q8N1V8 128 aa11.13□□□□□ -0.63
RBFOX1-212ENST00000550418 C6orf223Q8N319 242 aa11.13□□□□□ -0.63
RBFOX1-212ENST00000550418 SPEGQ15772 3267 aa11.13□□□□□ -0.63
RBFOX1-212ENST00000550418 C11orf72Q8NBR9 251 aa11.12□□□□□ -0.63
RBFOX1-212ENST00000550418 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-212ENST00000550418 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-212ENST00000550418 RETNQ9HD89 108 aa11.11□□□□□ -0.63
RBFOX1-212ENST00000550418 LITAFQ99732 161 aa11.1□□□□□ -0.63
RBFOX1-212ENST00000550418 SPATA3Q8NHX4 192 aa11.1□□□□□ -0.63
RBFOX1-212ENST00000550418 IGLV1-51P01701 117 aa11.09□□□□□ -0.63
RBFOX1-212ENST00000550418 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
RBFOX1-212ENST00000550418 SMCR5Q8TEV8 140 aa11.08□□□□□ -0.64
RBFOX1-212ENST00000550418 Q9UF83 564 aa11.08□□□□□ -0.64
RBFOX1-212ENST00000550418 K7ERS5 55 aa11.07□□□□□ -0.64
RBFOX1-212ENST00000550418 MUC4Q99102 2169 aa11.05□□□□□ -0.64
RBFOX1-212ENST00000550418 HCG22E2RYF7 251 aa11.04□□□□□ -0.64
RBFOX1-212ENST00000550418 H0Y9P7 68 aa11.04□□□□□ -0.64
RBFOX1-212ENST00000550418 A0A087WSZ3 146 aa11.04□□□□□ -0.64
RBFOX1-212ENST00000550418 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
RBFOX1-212ENST00000550418 hDV103S1A0JD37 113 aa11.04□□□□□ -0.64
RBFOX1-212ENST00000550418 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
RBFOX1-212ENST00000550418 IGHV4-30-4P0DP06 118 aa11.03□□□□□ -0.64
RBFOX1-212ENST00000550418 Q6ZQT0 140 aa11.02□□□□□ -0.64
RBFOX1-212ENST00000550418 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
RBFOX1-212ENST00000550418 PCOTHQ58A44 107 aa11.02□□□□□ -0.65
RBFOX1-212ENST00000550418 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
RBFOX1-212ENST00000550418 IGLV9-49A0A0B4J1Y8 123 aa11.01□□□□□ -0.65
RBFOX1-212ENST00000550418 REG3GQ6UW15 175 aa11.01□□□□□ -0.65
RBFOX1-212ENST00000550418 FRYLO94915 3013 aa11□□□□□ -0.65
RBFOX1-212ENST00000550418 DEFB116Q30KQ4 102 aa11□□□□□ -0.65
RBFOX1-212ENST00000550418 C2orf48Q96LS8 159 aa11□□□□□ -0.65
RBFOX1-212ENST00000550418 LIMD2Q9BT23 127 aa11□□□□□ -0.65
RBFOX1-212ENST00000550418 PLAC8L1A1L4L8 177 aa11□□□□□ -0.65
RBFOX1-212ENST00000550418 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-212ENST00000550418 TM2D3Q9BRN9 247 aa10.99□□□□□ -0.65
RBFOX1-212ENST00000550418 LOC110117498A0A087WWA1 95 aa10.99□□□□□ -0.65
RBFOX1-212ENST00000550418 Q6ZRU5 148 aa10.97□□□□□ -0.65
RBFOX1-212ENST00000550418 OXLD1Q5BKU9 147 aa10.96□□□□□ -0.65
RBFOX1-212ENST00000550418 FREM2Q5SZK8 3169 aa10.96□□□□□ -0.66
RBFOX1-212ENST00000550418 CFAP46Q8IYW2 2715 aa10.96□□□□□ -0.66
RBFOX1-212ENST00000550418 F8WDY8 70 aa10.95□□□□□ -0.66
RBFOX1-212ENST00000550418 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
RBFOX1-212ENST00000550418 Q9BRP9 147 aa10.95□□□□□ -0.66
RBFOX1-212ENST00000550418 EIF4EBP3O60516 100 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-212ENST00000550418 C1orf64Q8NEQ6 169 aa10.93□□□□□ -0.66
RBFOX1-212ENST00000550418 BOD1L1Q8NFC6 3051 aa10.93□□□□□ -0.66
RBFOX1-212ENST00000550418 REV3LO60673 3130 aa10.93□□□□□ -0.66
RBFOX1-212ENST00000550418 USP24Q9UPU5 2620 aa10.93□□□□□ -0.66
RBFOX1-212ENST00000550418 FRYQ5TBA9 3013 aa10.92□□□□□ -0.66
RBFOX1-212ENST00000550418 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
RBFOX1-212ENST00000550418 IGHV6-1A0A0B4J1U7 121 aa10.91□□□□□ -0.66
RBFOX1-212ENST00000550418 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
RBFOX1-212ENST00000550418 A0A1B0GW54 56 aa10.9□□□□□ -0.67
RBFOX1-212ENST00000550418 SPTBN5Q9NRC6 3674 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-212ENST00000550418 ELOF1P60002 83 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-212ENST00000550418 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
RBFOX1-212ENST00000550418 Q6ZTC4 211 aa10.88□□□□□ -0.67
RBFOX1-212ENST00000550418 FLNAP21333 2647 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-212ENST00000550418 C6orf48Q9UBA6 75 aa10.88□□□□□ -0.67
RBFOX1-212ENST00000550418 NBEAQ8NFP9 2946 aa10.87□□□□□ -0.67
RBFOX1-212ENST00000550418 C7orf33Q8WU49 177 aa10.86□□□□□ -0.67
RBFOX1-212ENST00000550418 ITPR3Q14573 2671 aa10.85□□□□□ -0.67
RBFOX1-212ENST00000550418 KLKP1Q107X0 134 aa10.85□□□□□ -0.67
RBFOX1-212ENST00000550418 HELZ2Q9BYK8 2649 aaKnown RBP10.85□□□□□ -0.67
RBFOX1-212ENST00000550418 LY6G6CO95867 125 aa10.84□□□□□ -0.67
RBFOX1-212ENST00000550418 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
RBFOX1-212ENST00000550418 PRLHP81277 87 aa10.84□□□□□ -0.67
RBFOX1-212ENST00000550418 Q8NBF4 154 aa10.84□□□□□ -0.67
RBFOX1-212ENST00000550418 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
RBFOX1-212ENST00000550418 ERC2-IT1O76042 136 aa10.83□□□□□ -0.68
RBFOX1-212ENST00000550418 C16orf95Q9H693 158 aa10.82□□□□□ -0.68
RBFOX1-212ENST00000550418 ATRQ13535 2644 aa10.81□□□□□ -0.68
RBFOX1-212ENST00000550418 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
RBFOX1-212ENST00000550418 MYO15AQ9UKN7 3530 aa10.79□□□□□ -0.68
RBFOX1-212ENST00000550418 MAST4O15021 2626 aa10.79□□□□□ -0.68
RBFOX1-212ENST00000550418 COL27A1Q8IZC6 1860 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-212ENST00000550418 H3BPC8 53 aa10.78□□□□□ -0.68
RBFOX1-212ENST00000550418 H7BZZ5 65 aa10.78□□□□□ -0.68
RBFOX1-212ENST00000550418 LINC00167Q96N53 147 aa10.78□□□□□ -0.68
RBFOX1-212ENST00000550418 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
RBFOX1-212ENST00000550418 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
RBFOX1-212ENST00000550418 IGLV6-57P01721 117 aa10.76□□□□□ -0.69
RBFOX1-212ENST00000550418 M0R2N4 97 aa10.75□□□□□ -0.69
RBFOX1-212ENST00000550418 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
RBFOX1-212ENST00000550418 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
RBFOX1-212ENST00000550418 ADGRG4Q8IZF6 3080 aa10.75□□□□□ -0.69
RBFOX1-212ENST00000550418 A8MUN3 132 aa10.74□□□□□ -0.69
RBFOX1-212ENST00000550418 Q6ZRX8 168 aa10.73□□□□□ -0.69
RBFOX1-212ENST00000550418 ATMQ13315 3056 aa10.72□□□□□ -0.69
RBFOX1-212ENST00000550418 LINC00476Q8WZB0 136 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms