RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 TMEM223A0PJW6 202 aa9.29□□□□□ -0.92
COX6A1-203ENST00000550009 CRYGAP11844 174 aa9.29□□□□□ -0.92
COX6A1-203ENST00000550009 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
COX6A1-203ENST00000550009 SVBPQ8N300 66 aa9.29□□□□□ -0.92
COX6A1-203ENST00000550009 IFI27L1Q96BM0 104 aa9.28□□□□□ -0.92
COX6A1-203ENST00000550009 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
COX6A1-203ENST00000550009 LINC00158P58513 81 aa9.27□□□□□ -0.93
COX6A1-203ENST00000550009 SMIM13P0DJ93 91 aa9.26□□□□□ -0.93
COX6A1-203ENST00000550009 LINC00310P59036 64 aa9.26□□□□□ -0.93
COX6A1-203ENST00000550009 COX17Q14061 63 aa9.25□□□□□ -0.93
COX6A1-203ENST00000550009 C3orf22Q8N5N4 141 aa9.25□□□□□ -0.93
COX6A1-203ENST00000550009 H0Y8G0 127 aa9.24□□□□□ -0.93
COX6A1-203ENST00000550009 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
COX6A1-203ENST00000550009 NDUFA5Q16718 116 aa9.24□□□□□ -0.93
COX6A1-203ENST00000550009 CHCHD1Q96BP2 118 aaKnown RBP9.24□□□□□ -0.93
COX6A1-203ENST00000550009 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
COX6A1-203ENST00000550009 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
COX6A1-203ENST00000550009 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
COX6A1-203ENST00000550009 NCR3O14931 201 aa9.22□□□□□ -0.93
COX6A1-203ENST00000550009 TRGC2P03986 189 aa9.22□□□□□ -0.93
COX6A1-203ENST00000550009 RPL24P83731 157 aaKnown RBP9.22□□□□□ -0.93
COX6A1-203ENST00000550009 FAM229BQ4G0N7 80 aa9.2□□□□□ -0.94
COX6A1-203ENST00000550009 SLC7A5P1Q8MH63 180 aa9.2□□□□□ -0.94
COX6A1-203ENST00000550009 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
COX6A1-203ENST00000550009 HIGD2AQ9BW72 106 aa9.2□□□□□ -0.94
COX6A1-203ENST00000550009 SERF1AO75920 110 aa9.19□□□□□ -0.94
COX6A1-203ENST00000550009 DAND5Q8N907 189 aa9.19□□□□□ -0.94
COX6A1-203ENST00000550009 LINC00304Q8N9R0 145 aa9.19□□□□□ -0.94
COX6A1-203ENST00000550009 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
COX6A1-203ENST00000550009 HSBP1O75506 76 aa9.18□□□□□ -0.94
COX6A1-203ENST00000550009 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
COX6A1-203ENST00000550009 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
COX6A1-203ENST00000550009 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
COX6A1-203ENST00000550009 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
COX6A1-203ENST00000550009 FAT4Q6V0I7 4981 aa9.15□□□□□ -0.94
COX6A1-203ENST00000550009 FABP4P15090 132 aa9.15□□□□□ -0.94
COX6A1-203ENST00000550009 SFTA2Q6UW10 78 aa9.15□□□□□ -0.94
COX6A1-203ENST00000550009 SPRR4Q96PI1 79 aa9.15□□□□□ -0.94
COX6A1-203ENST00000550009 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
COX6A1-203ENST00000550009 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
COX6A1-203ENST00000550009 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
COX6A1-203ENST00000550009 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
COX6A1-203ENST00000550009 ATP6V1G1O75348 118 aa9.12□□□□□ -0.95
COX6A1-203ENST00000550009 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
COX6A1-203ENST00000550009 SPRR1AP35321 89 aa9.12□□□□□ -0.95
COX6A1-203ENST00000550009 SMCR5Q8TEV8 140 aa9.12□□□□□ -0.95
COX6A1-203ENST00000550009 COLCA2A8K830 154 aa9.11□□□□□ -0.95
COX6A1-203ENST00000550009 PRYO14603 147 aa9.11□□□□□ -0.95
COX6A1-203ENST00000550009 LEPROTO15243 131 aa9.11□□□□□ -0.95
COX6A1-203ENST00000550009 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
COX6A1-203ENST00000550009 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
COX6A1-203ENST00000550009 MYMXA0A1B0GTQ4 84 aa9.1□□□□□ -0.95
COX6A1-203ENST00000550009 HERV-K104P63124 156 aa9.1□□□□□ -0.95
COX6A1-203ENST00000550009 J3QQQ9 107 aa9.08□□□□□ -0.96
COX6A1-203ENST00000550009 NPC2P61916 151 aa9.08□□□□□ -0.96
COX6A1-203ENST00000550009 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
COX6A1-203ENST00000550009 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
COX6A1-203ENST00000550009 LINC00337Q8N6G1 96 aa9.07□□□□□ -0.96
COX6A1-203ENST00000550009 ETDCA0A1B0GVM5 59 aa9.06□□□□□ -0.96
COX6A1-203ENST00000550009 B5MCH6 92 aa9.06□□□□□ -0.96
COX6A1-203ENST00000550009 DPM2O94777 84 aa9.06□□□□□ -0.96
COX6A1-203ENST00000550009 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
COX6A1-203ENST00000550009 Q8NBF4 154 aa9.06□□□□□ -0.96
COX6A1-203ENST00000550009 Q9BRP9 147 aa9.06□□□□□ -0.96
COX6A1-203ENST00000550009 IGKCP01834 107 aa9.05□□□□□ -0.96
COX6A1-203ENST00000550009 LOC107984156A0A0G2JMH3 177 aa9.04□□□□□ -0.96
COX6A1-203ENST00000550009 PLNP26678 52 aa9.04□□□□□ -0.96
COX6A1-203ENST00000550009 GAGE2AQ6NT46 116 aa9.04□□□□□ -0.96
COX6A1-203ENST00000550009 ARL17AQ8IVW1 177 aa9.04□□□□□ -0.96
COX6A1-203ENST00000550009 HSPB8Q9UJY1 196 aa9.04□□□□□ -0.96
COX6A1-203ENST00000550009 DDTP30046 118 aa9.03□□□□□ -0.96
COX6A1-203ENST00000550009 TPRXLQ17RH7 258 aa9.02□□□□□ -0.97
COX6A1-203ENST00000550009 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
COX6A1-203ENST00000550009 CDIP1Q9H305 208 aa9.02□□□□□ -0.97
COX6A1-203ENST00000550009 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
COX6A1-203ENST00000550009 LGALS3P17931 250 aaKnown RBP9.01□□□□□ -0.97
COX6A1-203ENST00000550009 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
COX6A1-203ENST00000550009 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
COX6A1-203ENST00000550009 LINC00587B1AMM8 73 aa9□□□□□ -0.97
COX6A1-203ENST00000550009 MOBPQ13875 183 aa9□□□□□ -0.97
COX6A1-203ENST00000550009 ZNF706Q9Y5V0 76 aaPredicted RBP9□□□□□ -0.97
COX6A1-203ENST00000550009 IGLV6-57P01721 117 aa8.99□□□□□ -0.97
COX6A1-203ENST00000550009 HERVK_113P61574 105 aa8.99□□□□□ -0.97
COX6A1-203ENST00000550009 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
COX6A1-203ENST00000550009 TRBV10-2A0A0K0K1G8 114 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
COX6A1-203ENST00000550009 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
COX6A1-203ENST00000550009 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
COX6A1-203ENST00000550009 SPANXB1Q9NS25 103 aaPredicted RBP8.98□□□□□ -0.97
COX6A1-203ENST00000550009 E9PLD3 99 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms