RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 A0A0U1RRA0 63 aa9.03□□□□□ -0.96
NR4A1-212ENST00000549102 FABP4P15090 132 aa9.03□□□□□ -0.96
NR4A1-212ENST00000549102 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
NR4A1-212ENST00000549102 Q8NDZ9 215 aa9.03□□□□□ -0.96
NR4A1-212ENST00000549102 PLNP26678 52 aa9.02□□□□□ -0.97
NR4A1-212ENST00000549102 UBE2AP49459 152 aa9.02□□□□□ -0.97
NR4A1-212ENST00000549102 HERV-K104P63124 156 aa9.02□□□□□ -0.97
NR4A1-212ENST00000549102 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.97
NR4A1-212ENST00000549102 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
NR4A1-212ENST00000549102 SMIM13P0DJ93 91 aa9.01□□□□□ -0.97
NR4A1-212ENST00000549102 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
NR4A1-212ENST00000549102 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
NR4A1-212ENST00000549102 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
NR4A1-212ENST00000549102 LRP2P98164 4655 aa8.99□□□□□ -0.97
NR4A1-212ENST00000549102 TMEM238C9JI98 176 aa8.99□□□□□ -0.97
NR4A1-212ENST00000549102 LEPROTO15243 131 aa8.99□□□□□ -0.97
NR4A1-212ENST00000549102 DPM2O94777 84 aa8.99□□□□□ -0.97
NR4A1-212ENST00000549102 PMCHL2Q9BQD1 86 aa8.99□□□□□ -0.97
NR4A1-212ENST00000549102 TMEM126AQ9H061 195 aa8.99□□□□□ -0.97
NR4A1-212ENST00000549102 LINC00587B1AMM8 73 aa8.98□□□□□ -0.97
NR4A1-212ENST00000549102 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
NR4A1-212ENST00000549102 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
NR4A1-212ENST00000549102 PLEKHB2Q96CS7 222 aa8.98□□□□□ -0.97
NR4A1-212ENST00000549102 M0R378 163 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 IGKCP01834 107 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BJP06899 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BOP23527 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BBP33778 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BDP58876 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HERVK_113P61574 105 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BCP62807 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 PRLHP81277 87 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST2H2BEQ16778 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.97□□□□□ -0.97
NR4A1-212ENST00000549102 FAM19A1Q7Z5A9 133 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 BOD1L2Q8IYS8 172 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BHQ93079 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BNQ99877 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 HIST1H2BMQ99879 126 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 MAP1LC3CQ9BXW4 147 aa8.97□□□□□ -0.97
NR4A1-212ENST00000549102 A0A087X002 238 aa8.95□□□□□ -0.98
NR4A1-212ENST00000549102 J3QQQ9 107 aa8.95□□□□□ -0.98
NR4A1-212ENST00000549102 CRYGAP11844 174 aa8.95□□□□□ -0.98
NR4A1-212ENST00000549102 NCR3O14931 201 aa8.93□□□□□ -0.98
NR4A1-212ENST00000549102 LGALS3P17931 250 aaKnown RBP8.93□□□□□ -0.98
NR4A1-212ENST00000549102 NMUP48645 174 aa8.93□□□□□ -0.98
NR4A1-212ENST00000549102 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
NR4A1-212ENST00000549102 IGKV2D-26A0A0A0MRZ7 120 aa8.92□□□□□ -0.98
NR4A1-212ENST00000549102 SYS1-DBNDD2H3BUS1 97 aa8.91□□□□□ -0.98
NR4A1-212ENST00000549102 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
NR4A1-212ENST00000549102 DAND5Q8N907 189 aa8.91□□□□□ -0.98
NR4A1-212ENST00000549102 TYMSOSQ8TAI1 123 aa8.91□□□□□ -0.98
NR4A1-212ENST00000549102 PRYO14603 147 aa8.9□□□□□ -0.98
NR4A1-212ENST00000549102 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
NR4A1-212ENST00000549102 E9PLD3 99 aa8.89□□□□□ -0.99
NR4A1-212ENST00000549102 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
NR4A1-212ENST00000549102 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
NR4A1-212ENST00000549102 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
NR4A1-212ENST00000549102 KCNQ1DNQ9H478 68 aa8.88□□□□□ -0.99
NR4A1-212ENST00000549102 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
NR4A1-212ENST00000549102 LINC01545Q5VT33 79 aa8.87□□□□□ -0.99
NR4A1-212ENST00000549102 MIEN1Q9BRT3 115 aa8.87□□□□□ -0.99
NR4A1-212ENST00000549102 TSPAN13O95857 204 aa8.86□□□□□ -0.99
NR4A1-212ENST00000549102 SPRR1AP35321 89 aa8.86□□□□□ -0.99
NR4A1-212ENST00000549102 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
NR4A1-212ENST00000549102 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
NR4A1-212ENST00000549102 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
NR4A1-212ENST00000549102 TRBV10-2A0A0K0K1G8 114 aa8.85□□□□□ -0.99
NR4A1-212ENST00000549102 S100A12P80511 92 aa8.85□□□□□ -0.99
NR4A1-212ENST00000549102 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
NR4A1-212ENST00000549102 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
NR4A1-212ENST00000549102 PRR4Q16378 134 aa8.84□□□□□ -0.99
NR4A1-212ENST00000549102 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
NR4A1-212ENST00000549102 LPAP08519 4548 aa8.84□□□□□ -0.99
NR4A1-212ENST00000549102 KRTAP4-16G5E9R7 235 aaPredicted RBP8.83□□□□□ -1
NR4A1-212ENST00000549102 NDUFC2O95298 119 aa8.83□□□□□ -1
NR4A1-212ENST00000549102 C3orf79P0CE67 100 aa8.83□□□□□ -1
NR4A1-212ENST00000549102 DDTP30046 118 aa8.83□□□□□ -1
NR4A1-212ENST00000549102 ADAMTSL4-AS1Q5T5F5 129 aa8.83□□□□□ -1
NR4A1-212ENST00000549102 SPRR4Q96PI1 79 aa8.83□□□□□ -1
NR4A1-212ENST00000549102 NPC2P61916 151 aa8.82□□□□□ -1
NR4A1-212ENST00000549102 SOSTDC1Q6X4U4 206 aa8.82□□□□□ -1
NR4A1-212ENST00000549102 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
NR4A1-212ENST00000549102 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
NR4A1-212ENST00000549102 KRTDAPP60985 99 aa8.81□□□□□ -1
NR4A1-212ENST00000549102 EIF4EBP3O60516 100 aaPredicted RBP8.8□□□□□ -1
NR4A1-212ENST00000549102 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
NR4A1-212ENST00000549102 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
NR4A1-212ENST00000549102 SMCR5Q8TEV8 140 aa8.8□□□□□ -1
NR4A1-212ENST00000549102 B5MCH6 92 aa8.79□□□□□ -1
NR4A1-212ENST00000549102 IGLV6-57P01721 117 aa8.79□□□□□ -1
NR4A1-212ENST00000549102 RNF213Q63HN8 5207 aa8.78□□□□□ -1
NR4A1-212ENST00000549102 ZNF815PA8K554 130 aa8.78□□□□□ -1
NR4A1-212ENST00000549102 TIMM17BO60830 172 aa8.78□□□□□ -1
NR4A1-212ENST00000549102 LITAFQ99732 161 aa8.78□□□□□ -1
NR4A1-212ENST00000549102 TTTY13Q9BZ97 58 aa8.77□□□□□ -1.01
NR4A1-212ENST00000549102 TRAV23DV6A0A075B6W5 121 aa8.76□□□□□ -1.01
NR4A1-212ENST00000549102 C20orf202A1L168 122 aa8.76□□□□□ -1.01
NR4A1-212ENST00000549102 Q6ZRX8 168 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms