RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 SYCNQ0VAF6 134 aa3.19□□□□□ -1.9
APP-217ENST00000548570 JOSD1Q15040 202 aaPredicted RBP3.19□□□□□ -1.9
APP-217ENST00000548570 C5orf47Q569G3 176 aa3.19□□□□□ -1.9
APP-217ENST00000548570 PYY3Q5JQD4 70 aa3.19□□□□□ -1.9
APP-217ENST00000548570 COX7B2Q8TF08 81 aa3.19□□□□□ -1.9
APP-217ENST00000548570 TOMM7Q9P0U1 55 aa3.19□□□□□ -1.9
APP-217ENST00000548570 TP73-AS1Q9UF72 201 aa3.19□□□□□ -1.9
APP-217ENST00000548570 ABCA13Q86UQ4 5058 aa3.19□□□□□ -1.9
APP-217ENST00000548570 A0A096LNI7 61 aa3.18□□□□□ -1.9
APP-217ENST00000548570 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
APP-217ENST00000548570 E9PLD3 99 aa3.18□□□□□ -1.9
APP-217ENST00000548570 H3BRM9 83 aa3.18□□□□□ -1.9
APP-217ENST00000548570 LEPROTO15243 131 aa3.18□□□□□ -1.9
APP-217ENST00000548570 APOMO95445 188 aa3.18□□□□□ -1.9
APP-217ENST00000548570 XGP55808 180 aa3.18□□□□□ -1.9
APP-217ENST00000548570 CIRBPQ14011 172 aaKnown RBP3.18□□□□□ -1.9
APP-217ENST00000548570 C14orf177Q52M58 125 aa3.18□□□□□ -1.9
APP-217ENST00000548570 Q6ZRP5 223 aa3.18□□□□□ -1.9
APP-217ENST00000548570 Q6ZSA8 131 aa3.18□□□□□ -1.9
APP-217ENST00000548570 PCP2Q8IVA1 136 aa3.18□□□□□ -1.9
APP-217ENST00000548570 Q8NDZ9 215 aa3.18□□□□□ -1.9
APP-217ENST00000548570 CARD19Q96LW7 228 aa3.18□□□□□ -1.9
APP-217ENST00000548570 CAMK2N2Q96S95 79 aa3.18□□□□□ -1.9
APP-217ENST00000548570 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
APP-217ENST00000548570 J3QQQ9 107 aa3.17□□□□□ -1.9
APP-217ENST00000548570 NDUFA1O15239 70 aa3.17□□□□□ -1.9
APP-217ENST00000548570 TLX1NBP0CAT3 122 aa3.17□□□□□ -1.9
APP-217ENST00000548570 HAMPP81172 84 aa3.17□□□□□ -1.9
APP-217ENST00000548570 C9orf129Q5T035 196 aaKnown RBP3.17□□□□□ -1.9
APP-217ENST00000548570 PLEKHB2Q96CS7 222 aa3.17□□□□□ -1.9
APP-217ENST00000548570 LITAFQ99732 161 aa3.17□□□□□ -1.9
APP-217ENST00000548570 TRBV30A0A0K0K1B3 111 aa3.16□□□□□ -1.9
APP-217ENST00000548570 A0A1W2PNN7 141 aa3.16□□□□□ -1.9
APP-217ENST00000548570 FAM168BA1KXE4 195 aa3.16□□□□□ -1.9
APP-217ENST00000548570 C20orf202A1L168 122 aa3.16□□□□□ -1.9
APP-217ENST00000548570 ADAMTSL4-AS1Q5T5F5 129 aa3.16□□□□□ -1.9
APP-217ENST00000548570 SPACA4Q8TDM5 124 aa3.16□□□□□ -1.9
APP-217ENST00000548570 NDUFA12Q9UI09 145 aa3.16□□□□□ -1.9
APP-217ENST00000548570 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.15□□□□□ -1.91
APP-217ENST00000548570 A0A0J9YXY3 114 aa3.15□□□□□ -1.91
APP-217ENST00000548570 PRSS2P07478 247 aa3.15□□□□□ -1.91
APP-217ENST00000548570 SMIM13P0DJ93 91 aa3.15□□□□□ -1.91
APP-217ENST00000548570 CXCL5P42830 114 aa3.15□□□□□ -1.91
APP-217ENST00000548570 CKS1BP61024 79 aa3.15□□□□□ -1.91
APP-217ENST00000548570 SOSTDC1Q6X4U4 206 aa3.15□□□□□ -1.91
APP-217ENST00000548570 SCXQ7RTU7 201 aa3.15□□□□□ -1.91
APP-217ENST00000548570 KRTAP11-1Q8IUC1 163 aa3.15□□□□□ -1.91
APP-217ENST00000548570 CIRBP-AS1Q8TBR5 109 aa3.15□□□□□ -1.91
APP-217ENST00000548570 XAGE1AQ9HD64 81 aa3.15□□□□□ -1.91
APP-217ENST00000548570 ERG28Q9UKR5 140 aa3.15□□□□□ -1.91
APP-217ENST00000548570 A0A087WYN8 130 aa3.14□□□□□ -1.91
APP-217ENST00000548570 IGKV2-24A0A0C4DH68 120 aa3.14□□□□□ -1.91
APP-217ENST00000548570 LOC107984640A0A0U1RRK4 108 aa3.14□□□□□ -1.91
APP-217ENST00000548570 NDUFC2-KCTD14E9PQ53 114 aa3.14□□□□□ -1.91
APP-217ENST00000548570 PFN2P35080 140 aa3.14□□□□□ -1.91
APP-217ENST00000548570 NMUP48645 174 aa3.14□□□□□ -1.91
APP-217ENST00000548570 KRTAP10-4P60372 401 aaPredicted RBP3.14□□□□□ -1.91
APP-217ENST00000548570 HERVK_113P61574 105 aa3.14□□□□□ -1.91
APP-217ENST00000548570 RPL18AQ02543 176 aaKnown RBP3.14□□□□□ -1.91
APP-217ENST00000548570 BOD1L2Q8IYS8 172 aa3.14□□□□□ -1.91
APP-217ENST00000548570 LINC00518Q8N0U6 118 aa3.14□□□□□ -1.91
APP-217ENST00000548570 DAND5Q8N907 189 aa3.14□□□□□ -1.91
APP-217ENST00000548570 VPS13BQ7Z7G8 4022 aa3.13□□□□□ -1.91
APP-217ENST00000548570 PCLOQ9Y6V0 5065 aa3.13□□□□□ -1.91
APP-217ENST00000548570 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
APP-217ENST00000548570 ZNF815PA8K554 130 aa3.13□□□□□ -1.91
APP-217ENST00000548570 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
APP-217ENST00000548570 AKR1D1P51857 326 aa3.13□□□□□ -1.91
APP-217ENST00000548570 SEC61BP60468 96 aaKnown RBP3.13□□□□□ -1.91
APP-217ENST00000548570 SPATA45Q537H7 98 aa3.13□□□□□ -1.91
APP-217ENST00000548570 C2orf91Q6ZV80 131 aa3.13□□□□□ -1.91
APP-217ENST00000548570 MIR7-3HGQ8N6C7 128 aa3.13□□□□□ -1.91
APP-217ENST00000548570 C14orf144Q96I85 54 aa3.13□□□□□ -1.91
APP-217ENST00000548570 SND1-IT1Q9HBX3 110 aa3.13□□□□□ -1.91
APP-217ENST00000548570 PLAC8Q9NZF1 115 aa3.13□□□□□ -1.91
APP-217ENST00000548570 V9GYY9 64 aa3.13□□□□□ -1.91
APP-217ENST00000548570 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
APP-217ENST00000548570 CDK2AP2O75956 126 aa3.12□□□□□ -1.91
APP-217ENST00000548570 COX8AP10176 69 aa3.12□□□□□ -1.91
APP-217ENST00000548570 PRR3P79522 188 aaKnown RBP3.12□□□□□ -1.91
APP-217ENST00000548570 COX17Q14061 63 aa3.12□□□□□ -1.91
APP-217ENST00000548570 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
APP-217ENST00000548570 VAMP8Q9BV40 100 aa3.12□□□□□ -1.91
APP-217ENST00000548570 IGLV5-37A0A075B6J1 123 aa3.11□□□□□ -1.91
APP-217ENST00000548570 DLEU1O43261 78 aa3.11□□□□□ -1.91
APP-217ENST00000548570 TIMM17BO60830 172 aa3.11□□□□□ -1.91
APP-217ENST00000548570 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
APP-217ENST00000548570 LINC00158P58513 81 aa3.11□□□□□ -1.91
APP-217ENST00000548570 MEIG1Q5JSS6 88 aa3.11□□□□□ -1.91
APP-217ENST00000548570 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
APP-217ENST00000548570 Q75L30 129 aa3.11□□□□□ -1.91
APP-217ENST00000548570 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
APP-217ENST00000548570 C22orf24Q9Y442 160 aa3.11□□□□□ -1.91
APP-217ENST00000548570 IGKV2-28A0A075B6P5 120 aa3.1□□□□□ -1.91
APP-217ENST00000548570 IGKV2D-28P01615 120 aa3.1□□□□□ -1.91
APP-217ENST00000548570 SMIM6P0DI80 62 aa3.1□□□□□ -1.91
APP-217ENST00000548570 NPC2P61916 151 aa3.1□□□□□ -1.91
APP-217ENST00000548570 FAM19A5Q7Z5A7 132 aaPredicted RBP3.1□□□□□ -1.91
APP-217ENST00000548570 LINC00308Q8TCZ7 52 aa3.1□□□□□ -1.91
APP-217ENST00000548570 SPANXB1Q9NS25 103 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms