RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 LINC01549A6NIU2 74 aa8.72□□□□□ -1.01
SNX29P1-201ENST00000548357 S100PP25815 95 aa8.72□□□□□ -1.01
SNX29P1-201ENST00000548357 C18orf32Q8TCD1 76 aa8.72□□□□□ -1.01
SNX29P1-201ENST00000548357 SEC11CQ9BY50 192 aa8.72□□□□□ -1.01
SNX29P1-201ENST00000548357 IGLV7-46A0A075B6I9 117 aa8.71□□□□□ -1.02
SNX29P1-201ENST00000548357 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
SNX29P1-201ENST00000548357 SNAPINO95295 136 aa8.69□□□□□ -1.02
SNX29P1-201ENST00000548357 CDIP1Q9H305 208 aa8.69□□□□□ -1.02
SNX29P1-201ENST00000548357 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
SNX29P1-201ENST00000548357 CBLN2Q8IUK8 224 aa8.68□□□□□ -1.02
SNX29P1-201ENST00000548357 HIGD2AQ9BW72 106 aa8.68□□□□□ -1.02
SNX29P1-201ENST00000548357 HBDP02042 147 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 COX17Q14061 63 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 COX19Q49B96 90 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 C10orf91Q5T1B1 145 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 TMEM170BQ5T4T1 132 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 RPS10P5Q9NQ39 176 aa8.67□□□□□ -1.02
SNX29P1-201ENST00000548357 LINC00614P0C842 121 aa8.66□□□□□ -1.02
SNX29P1-201ENST00000548357 RPL24P83731 157 aaKnown RBP8.66□□□□□ -1.02
SNX29P1-201ENST00000548357 BAGE3Q86Y29 109 aa8.66□□□□□ -1.02
SNX29P1-201ENST00000548357 PPDPFQ9H3Y8 114 aa8.66□□□□□ -1.02
SNX29P1-201ENST00000548357 TRAPPC1Q9Y5R8 145 aa8.65□□□□□ -1.02
SNX29P1-201ENST00000548357 LINC00158P58513 81 aa8.64□□□□□ -1.03
SNX29P1-201ENST00000548357 DAND5Q8N907 189 aa8.64□□□□□ -1.03
SNX29P1-201ENST00000548357 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
SNX29P1-201ENST00000548357 NCR3O14931 201 aa8.63□□□□□ -1.03
SNX29P1-201ENST00000548357 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
SNX29P1-201ENST00000548357 SMIM13P0DJ93 91 aa8.62□□□□□ -1.03
SNX29P1-201ENST00000548357 RHEBQ15382 184 aa8.62□□□□□ -1.03
SNX29P1-201ENST00000548357 CHTOPQ9Y3Y2 248 aaKnown RBP8.62□□□□□ -1.03
SNX29P1-201ENST00000548357 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
SNX29P1-201ENST00000548357 Q8NBF4 154 aa8.6□□□□□ -1.03
SNX29P1-201ENST00000548357 SPRR1AP35321 89 aa8.59□□□□□ -1.03
SNX29P1-201ENST00000548357 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
SNX29P1-201ENST00000548357 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
SNX29P1-201ENST00000548357 PRYO14603 147 aa8.58□□□□□ -1.04
SNX29P1-201ENST00000548357 CTAG1AP78358 180 aa8.58□□□□□ -1.04
SNX29P1-201ENST00000548357 BOD1L2Q8IYS8 172 aa8.58□□□□□ -1.04
SNX29P1-201ENST00000548357 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
SNX29P1-201ENST00000548357 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
SNX29P1-201ENST00000548357 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
SNX29P1-201ENST00000548357 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
SNX29P1-201ENST00000548357 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
SNX29P1-201ENST00000548357 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
SNX29P1-201ENST00000548357 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
SNX29P1-201ENST00000548357 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
SNX29P1-201ENST00000548357 TRAV12-1A0A0B4J245 112 aa8.55□□□□□ -1.04
SNX29P1-201ENST00000548357 MEIG1Q5JSS6 88 aa8.55□□□□□ -1.04
SNX29P1-201ENST00000548357 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
SNX29P1-201ENST00000548357 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
SNX29P1-201ENST00000548357 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
SNX29P1-201ENST00000548357 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SNX29P1-201ENST00000548357 LINC00483Q53H64 154 aa8.53□□□□□ -1.04
SNX29P1-201ENST00000548357 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
SNX29P1-201ENST00000548357 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
SNX29P1-201ENST00000548357 ETDCA0A1B0GVM5 59 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 B5MCH6 92 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 MOBPQ13875 183 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 GAGE2AQ6NT46 116 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 Q9BRP9 147 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
SNX29P1-201ENST00000548357 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
SNX29P1-201ENST00000548357 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
SNX29P1-201ENST00000548357 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
SNX29P1-201ENST00000548357 COLCA2A8K830 154 aa8.49□□□□□ -1.05
SNX29P1-201ENST00000548357 H0Y8G0 127 aa8.49□□□□□ -1.05
SNX29P1-201ENST00000548357 S100A6P06703 90 aa8.49□□□□□ -1.05
SNX29P1-201ENST00000548357 LINC00310P59036 64 aa8.49□□□□□ -1.05
SNX29P1-201ENST00000548357 HERV-K104P63124 156 aa8.48□□□□□ -1.05
SNX29P1-201ENST00000548357 Q8N377 158 aa8.48□□□□□ -1.05
SNX29P1-201ENST00000548357 SPINK1P00995 79 aa8.47□□□□□ -1.05
SNX29P1-201ENST00000548357 AKR1D1P51857 326 aa8.47□□□□□ -1.05
SNX29P1-201ENST00000548357 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
SNX29P1-201ENST00000548357 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
SNX29P1-201ENST00000548357 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
SNX29P1-201ENST00000548357 MYMXA0A1B0GTQ4 84 aa8.45□□□□□ -1.06
SNX29P1-201ENST00000548357 DDTP30046 118 aa8.45□□□□□ -1.06
SNX29P1-201ENST00000548357 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
SNX29P1-201ENST00000548357 LEPROTO15243 131 aa8.44□□□□□ -1.06
SNX29P1-201ENST00000548357 SOSTDC1Q6X4U4 206 aa8.44□□□□□ -1.06
SNX29P1-201ENST00000548357 HSBP1O75506 76 aa8.43□□□□□ -1.06
SNX29P1-201ENST00000548357 S100A12P80511 92 aa8.43□□□□□ -1.06
SNX29P1-201ENST00000548357 Q6ZRX8 168 aa8.43□□□□□ -1.06
SNX29P1-201ENST00000548357 PMCHL2Q9BQD1 86 aa8.43□□□□□ -1.06
SNX29P1-201ENST00000548357 SMIM6P0DI80 62 aa8.42□□□□□ -1.06
SNX29P1-201ENST00000548357 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
SNX29P1-201ENST00000548357 SERF1AO75920 110 aa8.41□□□□□ -1.06
SNX29P1-201ENST00000548357 NPC2P61916 151 aa8.41□□□□□ -1.06
SNX29P1-201ENST00000548357 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
SNX29P1-201ENST00000548357 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
SNX29P1-201ENST00000548357 TRBV10-2A0A0K0K1G8 114 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 C5orf52A6NGY3 159 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 J3QQQ9 107 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 IGLV6-57P01721 117 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 XP32Q5T750 250 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 C12orf57Q99622 126 aa8.4□□□□□ -1.06
SNX29P1-201ENST00000548357 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms