RNA–Protein interactions for RNA: ENST00000547465.1

CASC18-201, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best)

Gene CASC18, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-201ENST00000547465 TRAV22A0A0B4J277 110 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 A0A0G2JND7 137 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 COX6CP09669 75 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 SSBP1Q04837 148 aaKnown RBP2.23□□□□□ -2.05
CASC18-201ENST00000547465 ZNF56Q15929 161 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 C20orf197Q8N268 126 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 SMCO4Q9NRQ5 59 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 SONP18583 2426 aaKnown RBP2.23□□□□□ -2.05
CASC18-201ENST00000547465 DOCK10Q96BY6 2186 aa2.23□□□□□ -2.05
CASC18-201ENST00000547465 MAP1AP78559 2803 aaPredicted RBP2.23□□□□□ -2.05
CASC18-201ENST00000547465 WNK1Q9H4A3 2382 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 ALPK2Q86TB3 2170 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 AKAP6Q13023 2319 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 LOC101927531A0A1B0GV80 90 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 H7BZZ5 65 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 ELOF1P60002 83 aaKnown RBP2.22□□□□□ -2.05
CASC18-201ENST00000547465 ETDBQ3ZM63 59 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 Q5VV11 94 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 LINC00322Q6ZN03 302 aaPredicted RBP2.22□□□□□ -2.05
CASC18-201ENST00000547465 FREM1Q5H8C1 2179 aa2.22□□□□□ -2.05
CASC18-201ENST00000547465 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 A0A1W2PPM0 123 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 CLPSL1A2RUU4 121 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 HCRTO43612 131 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 RPL37AP61513 92 aaKnown RBP2.21□□□□□ -2.06
CASC18-201ENST00000547465 DEFA5Q01523 94 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 SPATA45Q537H7 98 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 ARFGEF3Q5TH69 2177 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 SFTA2Q6UW10 78 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 VMO1Q7Z5L0 202 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 DYNLRB1Q9NP97 96 aa2.21□□□□□ -2.06
CASC18-201ENST00000547465 CSMD1Q96PZ7 3565 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 TRBV6-7A0A0A0MS04 114 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 LOC730098B7Z3J9 87 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 INE1O15225 51 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 CCL3L1P16619 93 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 HMGA1P17096 107 aaKnown RBP2.2□□□□□ -2.06
CASC18-201ENST00000547465 KRTAP10-12P60413 245 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 BPESC1Q9GZL8 116 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 NDUFA4L2Q9NRX3 87 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 HIGD1BQ9P298 99 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 LENEPQ9Y5L5 61 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 PRRC2CQ9Y520 2896 aaKnown RBP2.2□□□□□ -2.06
CASC18-201ENST00000547465 PTPRDP23468 1912 aa2.2□□□□□ -2.06
CASC18-201ENST00000547465 COL5A1P20908 1838 aaPredicted RBP2.19□□□□□ -2.06
CASC18-201ENST00000547465 MGAM2Q2M2H8 2515 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 J3QKU1 62 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 M0R2N4 97 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 PPP1R17O96001 155 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 IGKV1-17P01599 117 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 PRB1P04280 392 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 SMIM11AP58511 58 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 WFDC2Q14508 124 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 NMSQ5H8A3 153 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 LCE3CQ5T5A8 94 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 FAM74A4Q5TZK3 123 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 Q6ZRN7 208 aaPredicted RBP2.19□□□□□ -2.06
CASC18-201ENST00000547465 COX7B2Q8TF08 81 aa2.19□□□□□ -2.06
CASC18-201ENST00000547465 BSNQ9UPA5 3926 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 PDCD11Q14690 1871 aaKnown RBP2.18□□□□□ -2.06
CASC18-201ENST00000547465 ABCA4P78363 2273 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 LOC285095A0A1B0GVY8 99 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 KANTRA0A1W2PQU2 76 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 TMEM14DPA8MWL7 114 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 PDCD5O14737 125 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 BCE1O60756 84 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 PMCHL1Q16048 86 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 SPAG11AQ6PDA7 123 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 PPP1R1CQ8WVI7 109 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 CDC42SE2Q9NRR3 84 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 SNURFQ9Y675 71 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 TCHHQ07283 1943 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 CR1P17927 2039 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 MDC1Q14676 2089 aaKnown RBP2.18□□□□□ -2.06
CASC18-201ENST00000547465 TACC2O95359 2948 aa2.18□□□□□ -2.06
CASC18-201ENST00000547465 TRBV25-1A0A075B6N4 114 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 IGKV3D-7A0A0C4DH55 119 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 IGKV3OR2-268A0A0C4DH90 116 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 IGKV2-29A2NJV5 120 aaPredicted RBP2.17□□□□□ -2.06
CASC18-201ENST00000547465 HMGN4O00479 90 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 IGLC2P0DOY2 106 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 IGLC3P0DOY3 106 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 KLKP1Q107X0 134 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 BVES-AS1Q5T3Y7 98 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 TMEM170BQ5T4T1 132 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 V9GYH0 126 aa2.17□□□□□ -2.06
CASC18-201ENST00000547465 PCDH15Q96QU1 1955 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 CACNA1CQ13936 2221 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 TRGV2A0A075B6R0 118 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 NBDYA0A0U1RRE5 68 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 FXYD4P59646 89 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 FXYD3Q14802 87 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 FAM223AQ8IWN6 122 aa2.16□□□□□ -2.06
CASC18-201ENST00000547465 ZNF625Q96I27 306 aaPredicted RBP2.16□□□□□ -2.06
CASC18-201ENST00000547465 IGKV2-40A0A087WW87 121 aaPredicted RBP2.15□□□□□ -2.07
CASC18-201ENST00000547465 LOC110117498A0A087WWA1 95 aa2.15□□□□□ -2.07
CASC18-201ENST00000547465 F2Z2F3 143 aa2.15□□□□□ -2.07
CASC18-201ENST00000547465 IGKV2D-40P01614 121 aaPredicted RBP2.15□□□□□ -2.07
CASC18-201ENST00000547465 Q5BKY6 102 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms