RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 GAGE10A6NGK3 116 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 S100A1P23297 94 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 HERV-K104P63124 156 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 MEIG1Q5JSS6 88 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 DIRC1Q969H9 104 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 LINC00167Q96N53 147 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 NDUFA12Q9UI09 145 aa14.7□□□□□ -0.06
RBFOX1-209ENST00000547427 RPL37AP8A6NKH3 93 aa14.69□□□□□ -0.06
RBFOX1-209ENST00000547427 PLEKHB2Q96CS7 222 aa14.69□□□□□ -0.06
RBFOX1-209ENST00000547427 MYMXA0A1B0GTQ4 84 aa14.68□□□□□ -0.06
RBFOX1-209ENST00000547427 LEPROTO15243 131 aa14.68□□□□□ -0.06
RBFOX1-209ENST00000547427 MT1HL1P0DM35 61 aa14.68□□□□□ -0.06
RBFOX1-209ENST00000547427 RPL24P83731 157 aaKnown RBP14.68□□□□□ -0.06
RBFOX1-209ENST00000547427 SYS1-DBNDD2H3BUS1 97 aa14.66□□□□□ -0.06
RBFOX1-209ENST00000547427 SMIM13P0DJ93 91 aa14.66□□□□□ -0.06
RBFOX1-209ENST00000547427 LINC00587B1AMM8 73 aa14.65□□□□□ -0.06
RBFOX1-209ENST00000547427 H0Y9J4 135 aa14.64□□□□□ -0.07
RBFOX1-209ENST00000547427 J3QQQ9 107 aa14.64□□□□□ -0.07
RBFOX1-209ENST00000547427 VPREB1P12018 145 aa14.64□□□□□ -0.07
RBFOX1-209ENST00000547427 LGALS3P17931 250 aaKnown RBP14.63□□□□□ -0.07
RBFOX1-209ENST00000547427 TSPEAR-AS2P59090 65 aa14.63□□□□□ -0.07
RBFOX1-209ENST00000547427 COA6Q5JTJ3 125 aaKnown RBP14.62□□□□□ -0.07
RBFOX1-209ENST00000547427 IGKV2-28A0A075B6P5 120 aa14.61□□□□□ -0.07
RBFOX1-209ENST00000547427 IGKV2D-28P01615 120 aa14.61□□□□□ -0.07
RBFOX1-209ENST00000547427 ZNF861PO60384 105 aa14.6□□□□□ -0.07
RBFOX1-209ENST00000547427 BCE1O60756 84 aa14.6□□□□□ -0.07
RBFOX1-209ENST00000547427 PET117Q6UWS5 81 aa14.6□□□□□ -0.07
RBFOX1-209ENST00000547427 MIR7-3HGQ8N6C7 128 aa14.6□□□□□ -0.07
RBFOX1-209ENST00000547427 NMUP48645 174 aa14.59□□□□□ -0.07
RBFOX1-209ENST00000547427 RPL28P46779 137 aaKnown RBP14.57□□□□□ -0.08
RBFOX1-209ENST00000547427 LINC01545Q5VT33 79 aa14.57□□□□□ -0.08
RBFOX1-209ENST00000547427 IGLV1-50A0A075B6I6 118 aa14.56□□□□□ -0.08
RBFOX1-209ENST00000547427 C3orf79P0CE67 100 aa14.56□□□□□ -0.08
RBFOX1-209ENST00000547427 KRTDAPP60985 99 aa14.56□□□□□ -0.08
RBFOX1-209ENST00000547427 BOD1L2Q8IYS8 172 aa14.56□□□□□ -0.08
RBFOX1-209ENST00000547427 Q8NDZ9 215 aa14.56□□□□□ -0.08
RBFOX1-209ENST00000547427 E9PLD3 99 aa14.55□□□□□ -0.08
RBFOX1-209ENST00000547427 KRTAP10-8P60410 259 aa14.55□□□□□ -0.08
RBFOX1-209ENST00000547427 UBE2AP49459 152 aa14.54□□□□□ -0.08
RBFOX1-209ENST00000547427 M0R378 163 aa14.52□□□□□ -0.09
RBFOX1-209ENST00000547427 DAND5Q8N907 189 aa14.52□□□□□ -0.09
RBFOX1-209ENST00000547427 C20orf202A1L168 122 aa14.49□□□□□ -0.09
RBFOX1-209ENST00000547427 TMEM238C9JI98 176 aa14.49□□□□□ -0.09
RBFOX1-209ENST00000547427 PRR26Q8N8Z3 221 aa14.49□□□□□ -0.09
RBFOX1-209ENST00000547427 MIEN1Q9BRT3 115 aa14.49□□□□□ -0.09
RBFOX1-209ENST00000547427 TMEM126AQ9H061 195 aa14.49□□□□□ -0.09
RBFOX1-209ENST00000547427 NCR3O14931 201 aa14.48□□□□□ -0.09
RBFOX1-209ENST00000547427 FAM19A1Q7Z5A9 133 aa14.48□□□□□ -0.09
RBFOX1-209ENST00000547427 KRTAP1-4P0C5Y4 121 aa14.46□□□□□ -0.09
RBFOX1-209ENST00000547427 TNXBP22105 4242 aa14.45□□□□□ -0.1
RBFOX1-209ENST00000547427 IGKV2D-26A0A0A0MRZ7 120 aa14.45□□□□□ -0.1
RBFOX1-209ENST00000547427 A0A0J9YXY3 114 aa14.45□□□□□ -0.1
RBFOX1-209ENST00000547427 PRLHP81277 87 aa14.44□□□□□ -0.1
RBFOX1-209ENST00000547427 LOC107984156A0A0G2JMH3 177 aa14.43□□□□□ -0.1
RBFOX1-209ENST00000547427 S100A2P29034 98 aa14.43□□□□□ -0.1
RBFOX1-209ENST00000547427 ARL17AQ8IVW1 177 aa14.43□□□□□ -0.1
RBFOX1-209ENST00000547427 S100A6P06703 90 aa14.42□□□□□ -0.1
RBFOX1-209ENST00000547427 KRTAP13-1Q8IUC0 172 aa14.42□□□□□ -0.1
RBFOX1-209ENST00000547427 NPC2P61916 151 aa14.41□□□□□ -0.1
RBFOX1-209ENST00000547427 ZNF815PA8K554 130 aa14.4□□□□□ -0.1
RBFOX1-209ENST00000547427 RPL13AP40429 203 aaKnown RBP14.4□□□□□ -0.1
RBFOX1-209ENST00000547427 S100A12P80511 92 aa14.4□□□□□ -0.1
RBFOX1-209ENST00000547427 AKR1D1P51857 326 aa14.39□□□□□ -0.11
RBFOX1-209ENST00000547427 ADAMTSL4-AS1Q5T5F5 129 aa14.39□□□□□ -0.11
RBFOX1-209ENST00000547427 HIST3H2BBQ8N257 126 aa14.39□□□□□ -0.11
RBFOX1-209ENST00000547427 TRBV10-3A0A0K0K1G6 114 aa14.38□□□□□ -0.11
RBFOX1-209ENST00000547427 PRYO14603 147 aa14.38□□□□□ -0.11
RBFOX1-209ENST00000547427 ATOH7Q8N100 152 aa14.38□□□□□ -0.11
RBFOX1-209ENST00000547427 SPANXB1Q9NS25 103 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-209ENST00000547427 TRBV10-2A0A0K0K1G8 114 aa14.36□□□□□ -0.11
RBFOX1-209ENST00000547427 TTTY13Q9BZ97 58 aa14.36□□□□□ -0.11
RBFOX1-209ENST00000547427 NDUFC2O95298 119 aa14.35□□□□□ -0.11
RBFOX1-209ENST00000547427 HIST1H2BLQ99880 126 aa14.35□□□□□ -0.11
RBFOX1-209ENST00000547427 KCNQ1DNQ9H478 68 aa14.35□□□□□ -0.11
RBFOX1-209ENST00000547427 TIMM17BO60830 172 aa14.34□□□□□ -0.11
RBFOX1-209ENST00000547427 DDTP30046 118 aa14.34□□□□□ -0.11
RBFOX1-209ENST00000547427 HIGD2AQ9BW72 106 aa14.34□□□□□ -0.11
RBFOX1-209ENST00000547427 S100A7L2Q5SY68 101 aa14.33□□□□□ -0.12
RBFOX1-209ENST00000547427 SOSTDC1Q6X4U4 206 aa14.33□□□□□ -0.12
RBFOX1-209ENST00000547427 ETDCA0A1B0GVM5 59 aa14.32□□□□□ -0.12
RBFOX1-209ENST00000547427 CRYGAP11844 174 aa14.32□□□□□ -0.12
RBFOX1-209ENST00000547427 ANKRD39Q53RE8 183 aa14.32□□□□□ -0.12
RBFOX1-209ENST00000547427 SCGB1D4Q6XE38 83 aa14.31□□□□□ -0.12
RBFOX1-209ENST00000547427 LITAFQ99732 161 aa14.31□□□□□ -0.12
RBFOX1-209ENST00000547427 ANAPC11Q9NYG5 84 aa14.31□□□□□ -0.12
RBFOX1-209ENST00000547427 EIF4EBP3O60516 100 aaPredicted RBP14.3□□□□□ -0.12
RBFOX1-209ENST00000547427 LINC00337Q8N6G1 96 aa14.3□□□□□ -0.12
RBFOX1-209ENST00000547427 LINC00308Q8TCZ7 52 aa14.3□□□□□ -0.12
RBFOX1-209ENST00000547427 A0A087X002 238 aa14.28□□□□□ -0.12
RBFOX1-209ENST00000547427 SPRR1AP35321 89 aa14.28□□□□□ -0.12
RBFOX1-209ENST00000547427 SNRPEP62304 92 aaKnown RBP14.28□□□□□ -0.12
RBFOX1-209ENST00000547427 TYMSOSQ8TAI1 123 aa14.26□□□□□ -0.13
RBFOX1-209ENST00000547427 SPANXCQ9NY87 97 aa14.26□□□□□ -0.13
RBFOX1-209ENST00000547427 HMCN2Q8NDA2 5059 aa14.25□□□□□ -0.13
RBFOX1-209ENST00000547427 IGLV6-57P01721 117 aa14.25□□□□□ -0.13
RBFOX1-209ENST00000547427 FAM229BQ4G0N7 80 aa14.25□□□□□ -0.13
RBFOX1-209ENST00000547427 HSBP1L1C9JCN9 74 aa14.23□□□□□ -0.13
RBFOX1-209ENST00000547427 KRTAP4-16G5E9R7 235 aaPredicted RBP14.23□□□□□ -0.13
RBFOX1-209ENST00000547427 PCP2Q8IVA1 136 aa14.23□□□□□ -0.13
RBFOX1-209ENST00000547427 TRAV23DV6A0A075B6W5 121 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms