RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NDUFC2O95298 119 aa10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 CTAG1AP78358 180 aa10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 KMT2CQ8NEZ4 4911 aaKnown RBP10.13□□□□□ -0.79
TRAFD1-203ENST00000547063 SOSTDC1Q6X4U4 206 aa10.12□□□□□ -0.79
TRAFD1-203ENST00000547063 DPH3Q96FX2 82 aa10.11□□□□□ -0.79
TRAFD1-203ENST00000547063 DNAH10Q8IVF4 4471 aa10.1□□□□□ -0.79
TRAFD1-203ENST00000547063 SPACA4Q8TDM5 124 aa10.1□□□□□ -0.79
TRAFD1-203ENST00000547063 RYR2Q92736 4967 aa10.1□□□□□ -0.79
TRAFD1-203ENST00000547063 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
TRAFD1-203ENST00000547063 A4D1N5 150 aa10.08□□□□□ -0.8
TRAFD1-203ENST00000547063 PCP4L1A6NKN8 68 aa10.08□□□□□ -0.8
TRAFD1-203ENST00000547063 EIF4EBP3O60516 100 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-203ENST00000547063 CHTF8P0CG12 524 aa10.08□□□□□ -0.8
TRAFD1-203ENST00000547063 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
TRAFD1-203ENST00000547063 IGLV5-37A0A075B6J1 123 aa10.07□□□□□ -0.8
TRAFD1-203ENST00000547063 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
TRAFD1-203ENST00000547063 VPREB1P12018 145 aa10.07□□□□□ -0.8
TRAFD1-203ENST00000547063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-203ENST00000547063 HINT1P49773 126 aaPredicted RBP10.06□□□□□ -0.8
TRAFD1-203ENST00000547063 KRTAP10-1P60331 282 aa10.06□□□□□ -0.8
TRAFD1-203ENST00000547063 BVES-AS1Q5T3Y7 98 aa10.06□□□□□ -0.8
TRAFD1-203ENST00000547063 DNAH17Q9UFH2 4485 aa10.05□□□□□ -0.8
TRAFD1-203ENST00000547063 M0R378 163 aa10.05□□□□□ -0.8
TRAFD1-203ENST00000547063 FXYD2P54710 66 aa10.05□□□□□ -0.8
TRAFD1-203ENST00000547063 Q6ZSA8 131 aa10.05□□□□□ -0.8
TRAFD1-203ENST00000547063 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-203ENST00000547063 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
TRAFD1-203ENST00000547063 A6NDN8 102 aa10.04□□□□□ -0.8
TRAFD1-203ENST00000547063 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-203ENST00000547063 SERTAD4-AS1Q5TG53 156 aa10.04□□□□□ -0.8
TRAFD1-203ENST00000547063 FRAS1Q86XX4 4008 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 A0A087WYN8 130 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 FAM168BA1KXE4 195 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 PANO1I0J062 215 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 RAB37Q96AX2 223 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 PLAC8Q9NZF1 115 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 CBY1Q9Y3M2 126 aa10.03□□□□□ -0.8
TRAFD1-203ENST00000547063 EPM2AB3EWF7 344 aa10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 M0QXV9 152 aa10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 NCR3O14931 201 aa10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 Q8NDZ9 215 aa10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
TRAFD1-203ENST00000547063 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
TRAFD1-203ENST00000547063 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
TRAFD1-203ENST00000547063 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
TRAFD1-203ENST00000547063 CFC1P0CG37 223 aa10.01□□□□□ -0.81
TRAFD1-203ENST00000547063 PRR3P79522 188 aaKnown RBP10.01□□□□□ -0.81
TRAFD1-203ENST00000547063 TMEM126AQ9H061 195 aa10.01□□□□□ -0.81
TRAFD1-203ENST00000547063 A0A1B0GWB2 263 aa10□□□□□ -0.81
TRAFD1-203ENST00000547063 BATFQ16520 125 aa10□□□□□ -0.81
TRAFD1-203ENST00000547063 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
TRAFD1-203ENST00000547063 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
TRAFD1-203ENST00000547063 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
TRAFD1-203ENST00000547063 LINC00337Q8N6G1 96 aa9.99□□□□□ -0.81
TRAFD1-203ENST00000547063 PRO1854Q9UHT4 67 aa9.99□□□□□ -0.81
TRAFD1-203ENST00000547063 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
TRAFD1-203ENST00000547063 IGLV6-57P01721 117 aa9.97□□□□□ -0.81
TRAFD1-203ENST00000547063 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
TRAFD1-203ENST00000547063 CIRBP-AS1Q8TBR5 109 aa9.97□□□□□ -0.81
TRAFD1-203ENST00000547063 LINC00167Q96N53 147 aa9.97□□□□□ -0.81
TRAFD1-203ENST00000547063 TRBV10-3A0A0K0K1G6 114 aa9.95□□□□□ -0.82
TRAFD1-203ENST00000547063 GAGE10A6NGK3 116 aa9.95□□□□□ -0.82
TRAFD1-203ENST00000547063 RPL13AP40429 203 aaKnown RBP9.95□□□□□ -0.82
TRAFD1-203ENST00000547063 UBE2BP63146 152 aa9.95□□□□□ -0.82
TRAFD1-203ENST00000547063 SNHG12Q9BXW3 62 aa9.95□□□□□ -0.82
TRAFD1-203ENST00000547063 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
TRAFD1-203ENST00000547063 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
TRAFD1-203ENST00000547063 PHF5AQ7RTV0 110 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-203ENST00000547063 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
TRAFD1-203ENST00000547063 K7ERJ3 54 aa9.92□□□□□ -0.82
TRAFD1-203ENST00000547063 PRYO14603 147 aa9.92□□□□□ -0.82
TRAFD1-203ENST00000547063 Q1RN00 199 aa9.92□□□□□ -0.82
TRAFD1-203ENST00000547063 KCNQ1DNQ9H478 68 aa9.92□□□□□ -0.82
TRAFD1-203ENST00000547063 RYR3Q15413 4870 aa9.91□□□□□ -0.82
TRAFD1-203ENST00000547063 PKD1P98161 4303 aa9.91□□□□□ -0.82
TRAFD1-203ENST00000547063 TRAV23DV6A0A075B6W5 121 aa9.91□□□□□ -0.82
TRAFD1-203ENST00000547063 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
TRAFD1-203ENST00000547063 H7C2G1 150 aa9.9□□□□□ -0.82
TRAFD1-203ENST00000547063 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
TRAFD1-203ENST00000547063 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-203ENST00000547063 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-203ENST00000547063 CDK2AP2O75956 126 aa9.88□□□□□ -0.83
TRAFD1-203ENST00000547063 REG3GQ6UW15 175 aa9.88□□□□□ -0.83
TRAFD1-203ENST00000547063 SMIM11BQ8TCY0 68 aa9.88□□□□□ -0.83
TRAFD1-203ENST00000547063 DIRC1Q969H9 104 aa9.88□□□□□ -0.83
TRAFD1-203ENST00000547063 XGP55808 180 aa9.87□□□□□ -0.83
TRAFD1-203ENST00000547063 VAMP3Q15836 100 aa9.87□□□□□ -0.83
TRAFD1-203ENST00000547063 DNAH11Q96DT5 4516 aa9.86□□□□□ -0.83
TRAFD1-203ENST00000547063 TSPAN13O95857 204 aa9.86□□□□□ -0.83
TRAFD1-203ENST00000547063 COX6CP09669 75 aa9.86□□□□□ -0.83
TRAFD1-203ENST00000547063 PSMB2P49721 201 aa9.86□□□□□ -0.83
TRAFD1-203ENST00000547063 TRBV7-6A0A0J9YX20 115 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms