RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 Q8NDZ9 215 aa8.59□□□□□ -1.03
SCAF11-209ENST00000547018 C1orf43Q9BWL3 253 aa8.59□□□□□ -1.03
SCAF11-209ENST00000547018 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
SCAF11-209ENST00000547018 MDFIQ99750 246 aa8.57□□□□□ -1.04
SCAF11-209ENST00000547018 TGP01266 2768 aa8.57□□□□□ -1.04
SCAF11-209ENST00000547018 K7EIL1 84 aa8.56□□□□□ -1.04
SCAF11-209ENST00000547018 NHLRC4P0CG21 123 aaPredicted RBP8.56□□□□□ -1.04
SCAF11-209ENST00000547018 C6orf99Q4VX62 202 aa8.56□□□□□ -1.04
SCAF11-209ENST00000547018 C9orf129Q5T035 196 aaKnown RBP8.56□□□□□ -1.04
SCAF11-209ENST00000547018 WIPF1O43516 503 aa8.55□□□□□ -1.04
SCAF11-209ENST00000547018 EGFEM1PQ0D2K5 195 aa8.55□□□□□ -1.04
SCAF11-209ENST00000547018 C14orf132Q9NPU4 83 aa8.55□□□□□ -1.04
SCAF11-209ENST00000547018 C6orf48Q9UBA6 75 aa8.54□□□□□ -1.04
SCAF11-209ENST00000547018 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
SCAF11-209ENST00000547018 H3BT86 120 aa8.53□□□□□ -1.04
SCAF11-209ENST00000547018 SNCGO76070 127 aa8.53□□□□□ -1.04
SCAF11-209ENST00000547018 RPL28P46779 137 aaKnown RBP8.53□□□□□ -1.04
SCAF11-209ENST00000547018 Q6ZRU5 148 aa8.53□□□□□ -1.04
SCAF11-209ENST00000547018 CASC10Q5T4H9 136 aa8.52□□□□□ -1.05
SCAF11-209ENST00000547018 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
SCAF11-209ENST00000547018 CMYA5Q8N3K9 4069 aa8.5□□□□□ -1.05
SCAF11-209ENST00000547018 CXCL5P42830 114 aa8.5□□□□□ -1.05
SCAF11-209ENST00000547018 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
SCAF11-209ENST00000547018 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
SCAF11-209ENST00000547018 LINC00588Q9Y4M8 146 aa8.49□□□□□ -1.05
SCAF11-209ENST00000547018 TRBV10-3A0A0K0K1G6 114 aa8.49□□□□□ -1.05
SCAF11-209ENST00000547018 TRACP01848 142 aa8.48□□□□□ -1.05
SCAF11-209ENST00000547018 LYSTQ99698 3801 aa8.47□□□□□ -1.05
SCAF11-209ENST00000547018 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
SCAF11-209ENST00000547018 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
SCAF11-209ENST00000547018 H0YGX0 51 aa8.46□□□□□ -1.05
SCAF11-209ENST00000547018 NDUFV3P56181 108 aaKnown RBP8.46□□□□□ -1.05
SCAF11-209ENST00000547018 UBE2DNLQ8IWF7 75 aa8.46□□□□□ -1.05
SCAF11-209ENST00000547018 C15orf56Q8N910 161 aa8.46□□□□□ -1.06
SCAF11-209ENST00000547018 LAMTOR3Q9UHA4 124 aa8.46□□□□□ -1.06
SCAF11-209ENST00000547018 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
SCAF11-209ENST00000547018 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.45□□□□□ -1.06
SCAF11-209ENST00000547018 ORMDL1Q9P0S3 153 aa8.45□□□□□ -1.06
SCAF11-209ENST00000547018 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
SCAF11-209ENST00000547018 COX17Q14061 63 aa8.44□□□□□ -1.06
SCAF11-209ENST00000547018 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
SCAF11-209ENST00000547018 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
SCAF11-209ENST00000547018 DEFB105AQ8NG35 78 aa8.43□□□□□ -1.06
SCAF11-209ENST00000547018 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
SCAF11-209ENST00000547018 Q6ZRP5 223 aa8.43□□□□□ -1.06
SCAF11-209ENST00000547018 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
SCAF11-209ENST00000547018 PSCAO43653 123 aa8.42□□□□□ -1.06
SCAF11-209ENST00000547018 Q6ZQY7 126 aa8.42□□□□□ -1.06
SCAF11-209ENST00000547018 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
SCAF11-209ENST00000547018 FAM19A5Q7Z5A7 132 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-209ENST00000547018 LINC01556Q5JQF7 62 aa8.42□□□□□ -1.06
SCAF11-209ENST00000547018 Q8N814 137 aa8.42□□□□□ -1.06
SCAF11-209ENST00000547018 FAM168BA1KXE4 195 aa8.41□□□□□ -1.06
SCAF11-209ENST00000547018 M0R2N4 97 aa8.41□□□□□ -1.06
SCAF11-209ENST00000547018 HUWE1Q7Z6Z7 4374 aaKnown RBP8.4□□□□□ -1.06
SCAF11-209ENST00000547018 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.07
SCAF11-209ENST00000547018 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.07
SCAF11-209ENST00000547018 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.07
SCAF11-209ENST00000547018 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
SCAF11-209ENST00000547018 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
SCAF11-209ENST00000547018 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
SCAF11-209ENST00000547018 H3BNG1 76 aa8.39□□□□□ -1.07
SCAF11-209ENST00000547018 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
SCAF11-209ENST00000547018 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
SCAF11-209ENST00000547018 INAFM2P0DMQ5 153 aa8.38□□□□□ -1.07
SCAF11-209ENST00000547018 FUSP35637 526 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCAF11-209ENST00000547018 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
SCAF11-209ENST00000547018 NDUFC2O95298 119 aa8.37□□□□□ -1.07
SCAF11-209ENST00000547018 DIRC1Q969H9 104 aa8.37□□□□□ -1.07
SCAF11-209ENST00000547018 ZNF73O43830 326 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-209ENST00000547018 SERTAD4-AS1Q5TG53 156 aa8.37□□□□□ -1.07
SCAF11-209ENST00000547018 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
SCAF11-209ENST00000547018 DNAH10Q8IVF4 4471 aa8.36□□□□□ -1.07
SCAF11-209ENST00000547018 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
SCAF11-209ENST00000547018 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
SCAF11-209ENST00000547018 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
SCAF11-209ENST00000547018 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
SCAF11-209ENST00000547018 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
SCAF11-209ENST00000547018 VPREB1P12018 145 aa8.34□□□□□ -1.07
SCAF11-209ENST00000547018 COX7BP24311 80 aa8.34□□□□□ -1.08
SCAF11-209ENST00000547018 A0A087WVE0 104 aa8.33□□□□□ -1.08
SCAF11-209ENST00000547018 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
SCAF11-209ENST00000547018 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
SCAF11-209ENST00000547018 F8WDY8 70 aa8.32□□□□□ -1.08
SCAF11-209ENST00000547018 TMEM256-PLSCR3K7ERE1 68 aa8.32□□□□□ -1.08
SCAF11-209ENST00000547018 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
SCAF11-209ENST00000547018 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
SCAF11-209ENST00000547018 MEGF8Q7Z7M0 2845 aa8.31□□□□□ -1.08
SCAF11-209ENST00000547018 M0R378 163 aa8.3□□□□□ -1.08
SCAF11-209ENST00000547018 C7orf33Q8WU49 177 aa8.3□□□□□ -1.08
SCAF11-209ENST00000547018 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
SCAF11-209ENST00000547018 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
SCAF11-209ENST00000547018 RBM3P98179 157 aaKnown RBP8.3□□□□□ -1.08
SCAF11-209ENST00000547018 DNHD1Q96M86 4753 aa8.29□□□□□ -1.08
SCAF11-209ENST00000547018 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
SCAF11-209ENST00000547018 HAMPP81172 84 aa8.29□□□□□ -1.08
SCAF11-209ENST00000547018 HRCT1Q6UXD1 115 aa8.29□□□□□ -1.08
SCAF11-209ENST00000547018 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
SCAF11-209ENST00000547018 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
SCAF11-209ENST00000547018 SEC61GP60059 68 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms