RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
PTCH1-212ENST00000546744 POLQO75417 2590 aa9.06□□□□□ -0.96
PTCH1-212ENST00000546744 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
PTCH1-212ENST00000546744 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
PTCH1-212ENST00000546744 DSPP15924 2871 aaKnown RBP9.06□□□□□ -0.96
PTCH1-212ENST00000546744 SPATA3Q8NHX4 192 aa9.05□□□□□ -0.96
PTCH1-212ENST00000546744 Q6ZQT0 140 aa9.05□□□□□ -0.96
PTCH1-212ENST00000546744 KPRPQ5T749 579 aaPredicted RBP9.05□□□□□ -0.96
PTCH1-212ENST00000546744 LINC00482Q8N8I6 264 aa9.05□□□□□ -0.96
PTCH1-212ENST00000546744 KLK9Q2XQG4 91 aa9.05□□□□□ -0.96
PTCH1-212ENST00000546744 FHL2Q14192 279 aa9.04□□□□□ -0.96
PTCH1-212ENST00000546744 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
PTCH1-212ENST00000546744 RPL37AP8A6NKH3 93 aa9.04□□□□□ -0.96
PTCH1-212ENST00000546744 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
PTCH1-212ENST00000546744 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
PTCH1-212ENST00000546744 LITAFQ99732 161 aa9.03□□□□□ -0.96
PTCH1-212ENST00000546744 FAM218AQ96MZ4 157 aa9.02□□□□□ -0.97
PTCH1-212ENST00000546744 J3QKU1 62 aa9.02□□□□□ -0.97
PTCH1-212ENST00000546744 TRAV10A0A0B4J240 114 aa9.01□□□□□ -0.97
PTCH1-212ENST00000546744 C10orf99Q6UWK7 81 aa9.01□□□□□ -0.97
PTCH1-212ENST00000546744 VPREB1P12018 145 aa9.01□□□□□ -0.97
PTCH1-212ENST00000546744 FHL3Q13643 280 aa9.01□□□□□ -0.97
PTCH1-212ENST00000546744 C11orf72Q8NBR9 251 aa9.01□□□□□ -0.97
PTCH1-212ENST00000546744 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
PTCH1-212ENST00000546744 A0A096LNI7 61 aa9□□□□□ -0.97
PTCH1-212ENST00000546744 CD164Q04900 197 aa9□□□□□ -0.97
PTCH1-212ENST00000546744 LINC01006Q8NI28 216 aa9□□□□□ -0.97
PTCH1-212ENST00000546744 BOD1L1Q8NFC6 3051 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 FRYQ5TBA9 3013 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 DMXL2Q8TDJ6 3036 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 Q6ZSN1 163 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 ABCA12Q86UK0 2595 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 A0A0J9YWU9 116 aa8.99□□□□□ -0.97
PTCH1-212ENST00000546744 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-212ENST00000546744 C1orf64Q8NEQ6 169 aa8.98□□□□□ -0.97
PTCH1-212ENST00000546744 IGLV1-51P01701 117 aa8.98□□□□□ -0.97
PTCH1-212ENST00000546744 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-212ENST00000546744 SETD2Q9BYW2 2564 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-212ENST00000546744 A0A1W2PPR1 153 aa8.97□□□□□ -0.97
PTCH1-212ENST00000546744 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
PTCH1-212ENST00000546744 NANOS2P60321 138 aaKnown RBP8.96□□□□□ -0.97
PTCH1-212ENST00000546744 SMCR5Q8TEV8 140 aa8.96□□□□□ -0.97
PTCH1-212ENST00000546744 A0A087WSZ3 146 aa8.96□□□□□ -0.98
PTCH1-212ENST00000546744 PRM2P04554 102 aa8.96□□□□□ -0.98
PTCH1-212ENST00000546744 USP9YO00507 2555 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-212ENST00000546744 ELOF1P60002 83 aaKnown RBP8.96□□□□□ -0.98
PTCH1-212ENST00000546744 Q8NBF4 154 aa8.94□□□□□ -0.98
PTCH1-212ENST00000546744 LOC400499M0QZD8 3231 aa8.94□□□□□ -0.98
PTCH1-212ENST00000546744 LY6G6DO95868 133 aa8.93□□□□□ -0.98
PTCH1-212ENST00000546744 RAI1Q7Z5J4 1906 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-212ENST00000546744 TM2D3Q9BRN9 247 aa8.92□□□□□ -0.98
PTCH1-212ENST00000546744 MTORP42345 2549 aa8.92□□□□□ -0.98
PTCH1-212ENST00000546744 USP9XQ93008 2570 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-212ENST00000546744 Q9BRP9 147 aa8.91□□□□□ -0.98
PTCH1-212ENST00000546744 IGHV4-30-4P0DP06 118 aa8.9□□□□□ -0.98
PTCH1-212ENST00000546744 WDFY3Q8IZQ1 3526 aa8.9□□□□□ -0.98
PTCH1-212ENST00000546744 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.99
PTCH1-212ENST00000546744 C7orf33Q8WU49 177 aa8.9□□□□□ -0.99
PTCH1-212ENST00000546744 H7BZZ5 65 aa8.89□□□□□ -0.99
PTCH1-212ENST00000546744 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
PTCH1-212ENST00000546744 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
PTCH1-212ENST00000546744 ACYP2P14621 99 aa8.89□□□□□ -0.99
PTCH1-212ENST00000546744 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
PTCH1-212ENST00000546744 EDN2P20800 178 aa8.88□□□□□ -0.99
PTCH1-212ENST00000546744 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
PTCH1-212ENST00000546744 SPAG11AQ6PDA7 123 aa8.88□□□□□ -0.99
PTCH1-212ENST00000546744 Q6ZTC4 211 aa8.88□□□□□ -0.99
PTCH1-212ENST00000546744 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-212ENST00000546744 ATP11AUNQ6ZP68 121 aa8.87□□□□□ -0.99
PTCH1-212ENST00000546744 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
PTCH1-212ENST00000546744 KIAA0087Q14695 138 aa8.87□□□□□ -0.99
PTCH1-212ENST00000546744 C18orf65Q6ZTR6 163 aa8.87□□□□□ -0.99
PTCH1-212ENST00000546744 USP24Q9UPU5 2620 aa8.86□□□□□ -0.99
PTCH1-212ENST00000546744 A0A1B0GU69 56 aa8.85□□□□□ -0.99
PTCH1-212ENST00000546744 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
PTCH1-212ENST00000546744 A8MTW9 85 aa8.85□□□□□ -0.99
PTCH1-212ENST00000546744 MUC4Q99102 2169 aa8.84□□□□□ -0.99
PTCH1-212ENST00000546744 Q6ZRU5 148 aa8.84□□□□□ -0.99
PTCH1-212ENST00000546744 IGHV6-1A0A0B4J1U7 121 aa8.83□□□□□ -1
PTCH1-212ENST00000546744 C16orf95Q9H693 158 aa8.83□□□□□ -1
PTCH1-212ENST00000546744 ATMQ13315 3056 aa8.83□□□□□ -1
PTCH1-212ENST00000546744 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
PTCH1-212ENST00000546744 AVPP01185 164 aa8.83□□□□□ -1
PTCH1-212ENST00000546744 ANKRD17O75179 2603 aaKnown RBP8.82□□□□□ -1
PTCH1-212ENST00000546744 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.82□□□□□ -1
PTCH1-212ENST00000546744 IGSF10Q6WRI0 2623 aa8.82□□□□□ -1
PTCH1-212ENST00000546744 IGLV6-57P01721 117 aa8.82□□□□□ -1
PTCH1-212ENST00000546744 LYPD5Q6UWN5 251 aa8.81□□□□□ -1
PTCH1-212ENST00000546744 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
PTCH1-212ENST00000546744 RETNLBQ9BQ08 111 aa8.81□□□□□ -1
PTCH1-212ENST00000546744 CENPEQ02224 2701 aa8.81□□□□□ -1
PTCH1-212ENST00000546744 H3BNG1 76 aa8.8□□□□□ -1
PTCH1-212ENST00000546744 Q6ZRX8 168 aa8.8□□□□□ -1
PTCH1-212ENST00000546744 LOC101927531A0A1B0GV80 90 aa8.79□□□□□ -1
PTCH1-212ENST00000546744 MOBPQ13875 183 aa8.79□□□□□ -1
PTCH1-212ENST00000546744 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
PTCH1-212ENST00000546744 KRTAP10-9P60411 292 aa8.78□□□□□ -1
PTCH1-212ENST00000546744 PRR15Q8IV56 129 aa8.78□□□□□ -1
PTCH1-212ENST00000546744 A8MUN3 132 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms