RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 RPL24P83731 157 aaKnown RBP7.07□□□□□ -1.28
COPS7A-221ENST00000546229 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
COPS7A-221ENST00000546229 HIGD2AQ9BW72 106 aa7.07□□□□□ -1.28
COPS7A-221ENST00000546229 RAB14P61106 215 aa7.06□□□□□ -1.28
COPS7A-221ENST00000546229 LCE2DQ5TA82 110 aaPredicted RBP7.06□□□□□ -1.28
COPS7A-221ENST00000546229 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
COPS7A-221ENST00000546229 C18orf32Q8TCD1 76 aa7.05□□□□□ -1.28
COPS7A-221ENST00000546229 LINC00483Q53H64 154 aa7.04□□□□□ -1.28
COPS7A-221ENST00000546229 UQCC3Q6UW78 93 aa7.04□□□□□ -1.28
COPS7A-221ENST00000546229 DAND5Q8N907 189 aa7.04□□□□□ -1.28
COPS7A-221ENST00000546229 Q8NBF4 154 aa7.04□□□□□ -1.28
COPS7A-221ENST00000546229 PMCHL1Q16048 86 aa7.03□□□□□ -1.28
COPS7A-221ENST00000546229 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
COPS7A-221ENST00000546229 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
COPS7A-221ENST00000546229 SMCR5Q8TEV8 140 aa7.03□□□□□ -1.28
COPS7A-221ENST00000546229 SEC11CQ9BY50 192 aa7.03□□□□□ -1.28
COPS7A-221ENST00000546229 SMCO4Q9NRQ5 59 aa7.03□□□□□ -1.28
COPS7A-221ENST00000546229 PRYO14603 147 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 HBDP02042 147 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 IFITM2Q01629 132 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 FABP9Q0Z7S8 132 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 COX19Q49B96 90 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 LCE2CQ5TA81 110 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
COPS7A-221ENST00000546229 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
COPS7A-221ENST00000546229 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
COPS7A-221ENST00000546229 LINC00614P0C842 121 aa7□□□□□ -1.29
COPS7A-221ENST00000546229 S100PP25815 95 aa7□□□□□ -1.29
COPS7A-221ENST00000546229 NDUFA6P56556 154 aa7□□□□□ -1.29
COPS7A-221ENST00000546229 TMEM170BQ5T4T1 132 aa7□□□□□ -1.29
COPS7A-221ENST00000546229 Q8N377 158 aa7□□□□□ -1.29
COPS7A-221ENST00000546229 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
COPS7A-221ENST00000546229 SPINK1P00995 79 aa6.99□□□□□ -1.29
COPS7A-221ENST00000546229 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
COPS7A-221ENST00000546229 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
COPS7A-221ENST00000546229 SMIM13P0DJ93 91 aa6.98□□□□□ -1.29
COPS7A-221ENST00000546229 LINC00158P58513 81 aa6.98□□□□□ -1.29
COPS7A-221ENST00000546229 RPS29P62273 56 aaKnown RBP6.98□□□□□ -1.29
COPS7A-221ENST00000546229 TRBV10-3A0A0K0K1G6 114 aa6.97□□□□□ -1.29
COPS7A-221ENST00000546229 NCR3O14931 201 aa6.97□□□□□ -1.29
COPS7A-221ENST00000546229 ERC2-IT1O76042 136 aa6.97□□□□□ -1.29
COPS7A-221ENST00000546229 XP32Q5T750 250 aa6.97□□□□□ -1.29
COPS7A-221ENST00000546229 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
COPS7A-221ENST00000546229 B5MCH6 92 aa6.96□□□□□ -1.3
COPS7A-221ENST00000546229 RHEBQ15382 184 aa6.96□□□□□ -1.3
COPS7A-221ENST00000546229 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
COPS7A-221ENST00000546229 MIR7-3HGQ8N6C7 128 aa6.96□□□□□ -1.3
COPS7A-221ENST00000546229 Q9BRP9 147 aa6.96□□□□□ -1.3
COPS7A-221ENST00000546229 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
COPS7A-221ENST00000546229 LOC107984156A0A0G2JMH3 177 aa6.94□□□□□ -1.3
COPS7A-221ENST00000546229 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
COPS7A-221ENST00000546229 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
COPS7A-221ENST00000546229 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
COPS7A-221ENST00000546229 MOBPQ13875 183 aa6.94□□□□□ -1.3
COPS7A-221ENST00000546229 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
COPS7A-221ENST00000546229 ARL17AQ8IVW1 177 aa6.94□□□□□ -1.3
COPS7A-221ENST00000546229 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
COPS7A-221ENST00000546229 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
COPS7A-221ENST00000546229 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
COPS7A-221ENST00000546229 RPS10P5Q9NQ39 176 aa6.93□□□□□ -1.3
COPS7A-221ENST00000546229 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
COPS7A-221ENST00000546229 ETDCA0A1B0GVM5 59 aa6.92□□□□□ -1.3
COPS7A-221ENST00000546229 COMMD7Q86VX2 200 aa6.92□□□□□ -1.3
COPS7A-221ENST00000546229 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
COPS7A-221ENST00000546229 HERV-K104P63124 156 aa6.91□□□□□ -1.3
COPS7A-221ENST00000546229 GAGE2AQ6NT46 116 aa6.91□□□□□ -1.3
COPS7A-221ENST00000546229 Q6ZRX8 168 aa6.91□□□□□ -1.3
COPS7A-221ENST00000546229 SSBP3-AS1Q7Z2R9 100 aa6.91□□□□□ -1.3
COPS7A-221ENST00000546229 MT1HP80294 61 aa6.9□□□□□ -1.3
COPS7A-221ENST00000546229 MEIG1Q5JSS6 88 aa6.9□□□□□ -1.3
COPS7A-221ENST00000546229 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
COPS7A-221ENST00000546229 IFI27L1Q96BM0 104 aa6.9□□□□□ -1.3
COPS7A-221ENST00000546229 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
COPS7A-221ENST00000546229 IGLV9-49A0A0B4J1Y8 123 aa6.89□□□□□ -1.31
COPS7A-221ENST00000546229 TRBV10-2A0A0K0K1G8 114 aa6.89□□□□□ -1.31
COPS7A-221ENST00000546229 SLC25A20O43772 301 aa6.88□□□□□ -1.31
COPS7A-221ENST00000546229 IGLV6-57P01721 117 aa6.88□□□□□ -1.31
COPS7A-221ENST00000546229 CHCHD1Q96BP2 118 aaKnown RBP6.88□□□□□ -1.31
COPS7A-221ENST00000546229 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
COPS7A-221ENST00000546229 DDTP30046 118 aa6.87□□□□□ -1.31
COPS7A-221ENST00000546229 LINC00310P59036 64 aa6.87□□□□□ -1.31
COPS7A-221ENST00000546229 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
COPS7A-221ENST00000546229 SOSTDC1Q6X4U4 206 aa6.85□□□□□ -1.31
COPS7A-221ENST00000546229 SPANXB1Q9NS25 103 aaPredicted RBP6.85□□□□□ -1.31
COPS7A-221ENST00000546229 LINC00587B1AMM8 73 aa6.84□□□□□ -1.31
COPS7A-221ENST00000546229 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
COPS7A-221ENST00000546229 LEPROTO15243 131 aa6.83□□□□□ -1.32
COPS7A-221ENST00000546229 ATP6V1G1O75348 118 aa6.83□□□□□ -1.32
COPS7A-221ENST00000546229 NDUFC2O95298 119 aa6.83□□□□□ -1.32
COPS7A-221ENST00000546229 ST20-AS1Q8NBB2 130 aa6.83□□□□□ -1.32
COPS7A-221ENST00000546229 MAP1LC3CQ9BXW4 147 aa6.82□□□□□ -1.32
COPS7A-221ENST00000546229 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
COPS7A-221ENST00000546229 SPRR1BP22528 89 aa6.81□□□□□ -1.32
COPS7A-221ENST00000546229 J3QQQ9 107 aa6.8□□□□□ -1.32
COPS7A-221ENST00000546229 ZNF73O43830 326 aaPredicted RBP6.79□□□□□ -1.32
COPS7A-221ENST00000546229 APOC3P02656 99 aa6.79□□□□□ -1.32
COPS7A-221ENST00000546229 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
COPS7A-221ENST00000546229 S100A12P80511 92 aa6.79□□□□□ -1.32
COPS7A-221ENST00000546229 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms