RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
SCARB1-210ENST00000545493 MUC17Q685J3 4493 aa12.39□□□□□ -0.43
SCARB1-210ENST00000545493 TRAV12-1A0A0B4J245 112 aa12.38□□□□□ -0.43
SCARB1-210ENST00000545493 TMEM223A0PJW6 202 aa12.38□□□□□ -0.43
SCARB1-210ENST00000545493 CHCHD1Q96BP2 118 aaKnown RBP12.38□□□□□ -0.43
SCARB1-210ENST00000545493 M0R378 163 aa12.37□□□□□ -0.43
SCARB1-210ENST00000545493 RPL24P83731 157 aaKnown RBP12.37□□□□□ -0.43
SCARB1-210ENST00000545493 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
SCARB1-210ENST00000545493 IFI27L1Q96BM0 104 aa12.36□□□□□ -0.43
SCARB1-210ENST00000545493 FAM229BQ4G0N7 80 aa12.35□□□□□ -0.43
SCARB1-210ENST00000545493 CBLN2Q8IUK8 224 aa12.33□□□□□ -0.44
SCARB1-210ENST00000545493 SLC7A5P1Q8MH63 180 aa12.33□□□□□ -0.44
SCARB1-210ENST00000545493 A0A0U1RRA0 63 aa12.32□□□□□ -0.44
SCARB1-210ENST00000545493 LINC00158P58513 81 aa12.32□□□□□ -0.44
SCARB1-210ENST00000545493 FAM19A2Q8N3H0 131 aa12.3□□□□□ -0.44
SCARB1-210ENST00000545493 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
SCARB1-210ENST00000545493 LINC00304Q8N9R0 145 aa12.28□□□□□ -0.44
SCARB1-210ENST00000545493 HSBP1O75506 76 aa12.27□□□□□ -0.45
SCARB1-210ENST00000545493 LINC00310P59036 64 aa12.27□□□□□ -0.45
SCARB1-210ENST00000545493 PLEKHB2Q96CS7 222 aa12.27□□□□□ -0.45
SCARB1-210ENST00000545493 MEIG1Q5JSS6 88 aa12.26□□□□□ -0.45
SCARB1-210ENST00000545493 MIR7-3HGQ8N6C7 128 aa12.25□□□□□ -0.45
SCARB1-210ENST00000545493 RETNLBQ9BQ08 111 aa12.25□□□□□ -0.45
SCARB1-210ENST00000545493 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
SCARB1-210ENST00000545493 IGKV2D-26A0A0A0MRZ7 120 aa12.24□□□□□ -0.45
SCARB1-210ENST00000545493 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
SCARB1-210ENST00000545493 C3orf22Q8N5N4 141 aa12.24□□□□□ -0.45
SCARB1-210ENST00000545493 H0Y8G0 127 aa12.23□□□□□ -0.45
SCARB1-210ENST00000545493 NCR3O14931 201 aa12.23□□□□□ -0.45
SCARB1-210ENST00000545493 TRGC2P03986 189 aa12.23□□□□□ -0.45
SCARB1-210ENST00000545493 BOD1L2Q8IYS8 172 aa12.23□□□□□ -0.45
SCARB1-210ENST00000545493 NDUFA12Q9UI09 145 aa12.23□□□□□ -0.45
SCARB1-210ENST00000545493 PRYO14603 147 aa12.22□□□□□ -0.45
SCARB1-210ENST00000545493 HERV-K104P63124 156 aa12.22□□□□□ -0.45
SCARB1-210ENST00000545493 FAT4Q6V0I7 4981 aa12.22□□□□□ -0.45
SCARB1-210ENST00000545493 SERF1AO75920 110 aa12.21□□□□□ -0.45
SCARB1-210ENST00000545493 SPRR4Q96PI1 79 aa12.21□□□□□ -0.45
SCARB1-210ENST00000545493 LEPROTL1O95214 131 aa12.2□□□□□ -0.46
SCARB1-210ENST00000545493 SPRR1AP35321 89 aa12.2□□□□□ -0.46
SCARB1-210ENST00000545493 ATP6V1G1O75348 118 aa12.18□□□□□ -0.46
SCARB1-210ENST00000545493 MYMXA0A1B0GTQ4 84 aa12.17□□□□□ -0.46
SCARB1-210ENST00000545493 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
SCARB1-210ENST00000545493 LINC00337Q8N6G1 96 aa12.17□□□□□ -0.46
SCARB1-210ENST00000545493 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
SCARB1-210ENST00000545493 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
SCARB1-210ENST00000545493 LEPROTO15243 131 aa12.15□□□□□ -0.46
SCARB1-210ENST00000545493 DAND5Q8N907 189 aa12.15□□□□□ -0.46
SCARB1-210ENST00000545493 LINC00587B1AMM8 73 aa12.14□□□□□ -0.47
SCARB1-210ENST00000545493 PLNP26678 52 aa12.14□□□□□ -0.47
SCARB1-210ENST00000545493 CTAG1AP78358 180 aa12.13□□□□□ -0.47
SCARB1-210ENST00000545493 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
SCARB1-210ENST00000545493 PMCHL2Q9BQD1 86 aa12.13□□□□□ -0.47
SCARB1-210ENST00000545493 MAP1LC3CQ9BXW4 147 aa12.13□□□□□ -0.47
SCARB1-210ENST00000545493 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
SCARB1-210ENST00000545493 LOC107984156A0A0G2JMH3 177 aa12.11□□□□□ -0.47
SCARB1-210ENST00000545493 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
SCARB1-210ENST00000545493 J3QQQ9 107 aa12.11□□□□□ -0.47
SCARB1-210ENST00000545493 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
SCARB1-210ENST00000545493 ARL17AQ8IVW1 177 aa12.11□□□□□ -0.47
SCARB1-210ENST00000545493 HSPB8Q9UJY1 196 aa12.11□□□□□ -0.47
SCARB1-210ENST00000545493 DPM2O94777 84 aa12.1□□□□□ -0.47
SCARB1-210ENST00000545493 FABP4P15090 132 aa12.1□□□□□ -0.47
SCARB1-210ENST00000545493 COLCA2A8K830 154 aa12.09□□□□□ -0.47
SCARB1-210ENST00000545493 IGLV7-46A0A075B6I9 117 aa12.08□□□□□ -0.48
SCARB1-210ENST00000545493 IGKCP01834 107 aa12.08□□□□□ -0.48
SCARB1-210ENST00000545493 HERVK_113P61574 105 aa12.08□□□□□ -0.48
SCARB1-210ENST00000545493 B5MCH6 92 aa12.07□□□□□ -0.48
SCARB1-210ENST00000545493 NMUP48645 174 aa12.07□□□□□ -0.48
SCARB1-210ENST00000545493 LINC00483Q53H64 154 aa12.07□□□□□ -0.48
SCARB1-210ENST00000545493 PPDPFQ9H3Y8 114 aa12.07□□□□□ -0.48
SCARB1-210ENST00000545493 TRBV10-2A0A0K0K1G8 114 aa12.06□□□□□ -0.48
SCARB1-210ENST00000545493 DDTP30046 118 aa12.06□□□□□ -0.48
SCARB1-210ENST00000545493 SPAG11AQ6PDA7 123 aa12.06□□□□□ -0.48
SCARB1-210ENST00000545493 Q8NBF4 154 aa12.06□□□□□ -0.48
SCARB1-210ENST00000545493 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
SCARB1-210ENST00000545493 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
SCARB1-210ENST00000545493 CDIP1Q9H305 208 aa12.04□□□□□ -0.48
SCARB1-210ENST00000545493 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
SCARB1-210ENST00000545493 Q9BRP9 147 aa12.03□□□□□ -0.48
SCARB1-210ENST00000545493 S100A12P80511 92 aa12.02□□□□□ -0.49
SCARB1-210ENST00000545493 SOSTDC1Q6X4U4 206 aa12.02□□□□□ -0.49
SCARB1-210ENST00000545493 MIEN1Q9BRT3 115 aa12.02□□□□□ -0.49
SCARB1-210ENST00000545493 A0A0U1RQV1 116 aa12.01□□□□□ -0.49
SCARB1-210ENST00000545493 EIF4EBP3O60516 100 aaPredicted RBP12.01□□□□□ -0.49
SCARB1-210ENST00000545493 Q6ZRX8 168 aa12.01□□□□□ -0.49
SCARB1-210ENST00000545493 NDUFC2O95298 119 aa12□□□□□ -0.49
SCARB1-210ENST00000545493 IGLV6-57P01721 117 aa12□□□□□ -0.49
SCARB1-210ENST00000545493 GAGE2AQ6NT46 116 aa12□□□□□ -0.49
SCARB1-210ENST00000545493 A0A0J9YXY3 114 aa11.99□□□□□ -0.49
SCARB1-210ENST00000545493 E9PLD3 99 aa11.99□□□□□ -0.49
SCARB1-210ENST00000545493 NPC2P61916 151 aa11.99□□□□□ -0.49
SCARB1-210ENST00000545493 ADAMTSL4-AS1Q5T5F5 129 aa11.98□□□□□ -0.49
SCARB1-210ENST00000545493 TRAV23DV6A0A075B6W5 121 aa11.97□□□□□ -0.49
SCARB1-210ENST00000545493 C4orf48Q5BLP8 95 aa11.97□□□□□ -0.49
SCARB1-210ENST00000545493 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-210ENST00000545493 MOBPQ13875 183 aa11.96□□□□□ -0.49
SCARB1-210ENST00000545493 S100A7L2Q5SY68 101 aa11.96□□□□□ -0.49
SCARB1-210ENST00000545493 IGLV9-49A0A0B4J1Y8 123 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BKO60814 126 aa11.95□□□□□ -0.5
SCARB1-210ENST00000545493 HIST1H2BJP06899 126 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms