RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 NUPR2A6NF83 97 aa5.88□□□□□ -1.47
ATXN3-216ENST00000545170 EP300Q09472 2414 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-216ENST00000545170 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
ATXN3-216ENST00000545170 CACNA1GO43497 2377 aa5.86□□□□□ -1.47
ATXN3-216ENST00000545170 PCNX1Q96RV3 2341 aa5.86□□□□□ -1.47
ATXN3-216ENST00000545170 Q96NJ1 140 aa5.86□□□□□ -1.47
ATXN3-216ENST00000545170 IGLV6-57P01721 117 aa5.85□□□□□ -1.47
ATXN3-216ENST00000545170 FAM229BQ4G0N7 80 aa5.85□□□□□ -1.47
ATXN3-216ENST00000545170 INAFM1C9JVW0 142 aa5.85□□□□□ -1.47
ATXN3-216ENST00000545170 LY6G6DO95868 133 aa5.85□□□□□ -1.47
ATXN3-216ENST00000545170 SPANXA2-OT1Q8N9U9 137 aa5.85□□□□□ -1.47
ATXN3-216ENST00000545170 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
ATXN3-216ENST00000545170 PRO3102Q9H379 93 aa5.84□□□□□ -1.47
ATXN3-216ENST00000545170 PHF5AQ7RTV0 110 aaKnown RBP5.84□□□□□ -1.47
ATXN3-216ENST00000545170 IGLV1-51P01701 117 aa5.84□□□□□ -1.48
ATXN3-216ENST00000545170 C1orf134Q5TEV5 83 aa5.83□□□□□ -1.48
ATXN3-216ENST00000545170 MUC4Q99102 2169 aa5.83□□□□□ -1.48
ATXN3-216ENST00000545170 MED13LQ71F56 2210 aa5.83□□□□□ -1.48
ATXN3-216ENST00000545170 Q75L30 129 aa5.83□□□□□ -1.48
ATXN3-216ENST00000545170 TECTAO75443 2155 aa5.82□□□□□ -1.48
ATXN3-216ENST00000545170 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
ATXN3-216ENST00000545170 A0A0D9SG42 100 aa5.81□□□□□ -1.48
ATXN3-216ENST00000545170 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
ATXN3-216ENST00000545170 EIF4EBP3O60516 100 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-216ENST00000545170 NAV3Q8IVL0 2385 aa5.8□□□□□ -1.48
ATXN3-216ENST00000545170 AVPP01185 164 aa5.8□□□□□ -1.48
ATXN3-216ENST00000545170 IGFL1Q6UW32 110 aa5.8□□□□□ -1.48
ATXN3-216ENST00000545170 DSCR10P59022 87 aa5.79□□□□□ -1.48
ATXN3-216ENST00000545170 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
ATXN3-216ENST00000545170 CACNA1HO95180 2353 aa5.79□□□□□ -1.48
ATXN3-216ENST00000545170 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
ATXN3-216ENST00000545170 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-216ENST00000545170 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
ATXN3-216ENST00000545170 FAM104AQ969W3 186 aa5.77□□□□□ -1.49
ATXN3-216ENST00000545170 Q6ZRP5 223 aa5.77□□□□□ -1.49
ATXN3-216ENST00000545170 C9orf163Q8N9P6 203 aa5.76□□□□□ -1.49
ATXN3-216ENST00000545170 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
ATXN3-216ENST00000545170 CNOT1A5YKK6 2376 aaKnown RBP5.76□□□□□ -1.49
ATXN3-216ENST00000545170 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-216ENST00000545170 WNK1Q9H4A3 2382 aa5.75□□□□□ -1.49
ATXN3-216ENST00000545170 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
ATXN3-216ENST00000545170 A0A0G2JQZ4 141 aa5.75□□□□□ -1.49
ATXN3-216ENST00000545170 A0A1W2PNN7 141 aa5.75□□□□□ -1.49
ATXN3-216ENST00000545170 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
ATXN3-216ENST00000545170 Q8N377 158 aa5.74□□□□□ -1.49
ATXN3-216ENST00000545170 COL4A4P53420 1690 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-216ENST00000545170 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
ATXN3-216ENST00000545170 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
ATXN3-216ENST00000545170 OBSCN-AS1Q96MR7 158 aa5.73□□□□□ -1.49
ATXN3-216ENST00000545170 CREBBPQ92793 2442 aa5.73□□□□□ -1.49
ATXN3-216ENST00000545170 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
ATXN3-216ENST00000545170 LINC00588Q9Y4M8 146 aa5.73□□□□□ -1.49
ATXN3-216ENST00000545170 IGLV1-50A0A075B6I6 118 aa5.73□□□□□ -1.49
ATXN3-216ENST00000545170 Q5VV11 94 aa5.72□□□□□ -1.49
ATXN3-216ENST00000545170 KCNQ1DNQ9H478 68 aa5.72□□□□□ -1.49
ATXN3-216ENST00000545170 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.49
ATXN3-216ENST00000545170 ACACAQ13085 2346 aa5.71□□□□□ -1.5
ATXN3-216ENST00000545170 CSPG4Q6UVK1 2322 aa5.7□□□□□ -1.5
ATXN3-216ENST00000545170 MUC22E2RYF6 1773 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-216ENST00000545170 CSNK1G2-AS1Q8NCQ2 148 aa5.7□□□□□ -1.5
ATXN3-216ENST00000545170 DMAC1Q96GE9 116 aa5.7□□□□□ -1.5
ATXN3-216ENST00000545170 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-216ENST00000545170 Q8N1X5 172 aa5.69□□□□□ -1.5
ATXN3-216ENST00000545170 C16orf95Q9H693 158 aa5.68□□□□□ -1.5
ATXN3-216ENST00000545170 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
ATXN3-216ENST00000545170 SRCAPQ6ZRS2 3230 aa5.68□□□□□ -1.5
ATXN3-216ENST00000545170 OXTP01178 125 aa5.68□□□□□ -1.5
ATXN3-216ENST00000545170 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
ATXN3-216ENST00000545170 COL27A1Q8IZC6 1860 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-216ENST00000545170 GVINP1Q7Z2Y8 2422 aa5.66□□□□□ -1.5
ATXN3-216ENST00000545170 IGLV5-48A0A075B6I7 105 aa5.66□□□□□ -1.5
ATXN3-216ENST00000545170 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
ATXN3-216ENST00000545170 SPINK7P58062 85 aa5.65□□□□□ -1.5
ATXN3-216ENST00000545170 LTBP2Q14767 1821 aa5.65□□□□□ -1.5
ATXN3-216ENST00000545170 RTL8CO15255 209 aa5.65□□□□□ -1.51
ATXN3-216ENST00000545170 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
ATXN3-216ENST00000545170 A0A1B0GU33 70 aa5.64□□□□□ -1.51
ATXN3-216ENST00000545170 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
ATXN3-216ENST00000545170 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
ATXN3-216ENST00000545170 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
ATXN3-216ENST00000545170 H3BNG1 76 aa5.63□□□□□ -1.51
ATXN3-216ENST00000545170 ZNF575Q86XF7 245 aa5.63□□□□□ -1.51
ATXN3-216ENST00000545170 SMR3AQ99954 134 aa5.63□□□□□ -1.51
ATXN3-216ENST00000545170 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
ATXN3-216ENST00000545170 TLX1NBP0CAT3 122 aa5.62□□□□□ -1.51
ATXN3-216ENST00000545170 PCSK5Q92824 1860 aa5.62□□□□□ -1.51
ATXN3-216ENST00000545170 Q8NAQ8 132 aa5.6□□□□□ -1.51
ATXN3-216ENST00000545170 PTPRQQ9UMZ3 2332 aa5.59□□□□□ -1.51
ATXN3-216ENST00000545170 IGLV5-37A0A075B6J1 123 aa5.57□□□□□ -1.52
ATXN3-216ENST00000545170 HRES1P13985 223 aa5.56□□□□□ -1.52
ATXN3-216ENST00000545170 NBASA2RRP1 2371 aa5.56□□□□□ -1.52
ATXN3-216ENST00000545170 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
ATXN3-216ENST00000545170 OTOGLQ3ZCN5 2332 aa5.55□□□□□ -1.52
ATXN3-216ENST00000545170 A0A1W2PPR1 153 aa5.55□□□□□ -1.52
ATXN3-216ENST00000545170 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
ATXN3-216ENST00000545170 DNAH10OSP0CZ25 163 aa5.54□□□□□ -1.52
ATXN3-216ENST00000545170 KRTAP10-9P60411 292 aa5.54□□□□□ -1.52
ATXN3-216ENST00000545170 NBDYA0A0U1RRE5 68 aa5.53□□□□□ -1.52
ATXN3-216ENST00000545170 ZNF861PO60384 105 aa5.52□□□□□ -1.53
ATXN3-216ENST00000545170 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms