RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
CPSF7-224ENST00000544990 CHTOPQ9Y3Y2 248 aaKnown RBP4.56□□□□□ -1.68
CPSF7-224ENST00000544990 TRAV12-1A0A0B4J245 112 aa4.55□□□□□ -1.68
CPSF7-224ENST00000544990 M0QXV9 152 aa4.55□□□□□ -1.68
CPSF7-224ENST00000544990 ZNF22P17026 224 aaPredicted RBP4.55□□□□□ -1.68
CPSF7-224ENST00000544990 UBE2BP63146 152 aa4.55□□□□□ -1.68
CPSF7-224ENST00000544990 C1orf137Q5JT78 98 aa4.55□□□□□ -1.68
CPSF7-224ENST00000544990 C9orf129Q5T035 196 aaKnown RBP4.55□□□□□ -1.68
CPSF7-224ENST00000544990 REG3GQ6UW15 175 aa4.55□□□□□ -1.68
CPSF7-224ENST00000544990 C11orf86A6NJI1 115 aa4.54□□□□□ -1.68
CPSF7-224ENST00000544990 COLCA2A8K830 154 aa4.54□□□□□ -1.68
CPSF7-224ENST00000544990 LEPROTL1O95214 131 aa4.54□□□□□ -1.68
CPSF7-224ENST00000544990 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
CPSF7-224ENST00000544990 LBHQ53QV2 105 aaPredicted RBP4.54□□□□□ -1.68
CPSF7-224ENST00000544990 SFTA2Q6UW10 78 aa4.54□□□□□ -1.68
CPSF7-224ENST00000544990 FAM19A2Q8N3H0 131 aa4.54□□□□□ -1.68
CPSF7-224ENST00000544990 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
CPSF7-224ENST00000544990 SERF1AO75920 110 aa4.53□□□□□ -1.68
CPSF7-224ENST00000544990 C22orf24Q9Y442 160 aa4.53□□□□□ -1.68
CPSF7-224ENST00000544990 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
CPSF7-224ENST00000544990 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 PFN2P35080 140 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 COX17Q14061 63 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 TP73-AS1Q9UF72 201 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 HSPB8Q9UJY1 196 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 ERG28Q9UKR5 140 aa4.52□□□□□ -1.69
CPSF7-224ENST00000544990 TMEM223A0PJW6 202 aa4.51□□□□□ -1.69
CPSF7-224ENST00000544990 H0Y8G0 127 aa4.51□□□□□ -1.69
CPSF7-224ENST00000544990 MRPL55Q7Z7F7 128 aaKnown RBP4.51□□□□□ -1.69
CPSF7-224ENST00000544990 NKAPP1Q8N9T2 125 aa4.51□□□□□ -1.69
CPSF7-224ENST00000544990 DIRC1Q969H9 104 aa4.51□□□□□ -1.69
CPSF7-224ENST00000544990 NUPR1O60356 82 aa4.5□□□□□ -1.69
CPSF7-224ENST00000544990 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
CPSF7-224ENST00000544990 FABP4P15090 132 aa4.5□□□□□ -1.69
CPSF7-224ENST00000544990 KRTAP11-1Q8IUC1 163 aa4.5□□□□□ -1.69
CPSF7-224ENST00000544990 ZNF625Q96I27 306 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-224ENST00000544990 LINC00587B1AMM8 73 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 SCO1O75880 301 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 PLNP26678 52 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 LINC00158P58513 81 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
CPSF7-224ENST00000544990 Q75L30 129 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 LINC00167Q96N53 147 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 MAP1LC3CQ9BXW4 147 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 SND1-IT1Q9HBX3 110 aa4.49□□□□□ -1.69
CPSF7-224ENST00000544990 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
CPSF7-224ENST00000544990 H0Y9J4 135 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 S100A1P23297 94 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HERVK_113P61574 105 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HERV-K104P63124 156 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
CPSF7-224ENST00000544990 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 RPL37AP8A6NKH3 93 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 ZNF861PO60384 105 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 DPM2O94777 84 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 IGKCP01834 107 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 KRTAP10-8P60410 259 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 PLEKHB2Q96CS7 222 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
CPSF7-224ENST00000544990 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
CPSF7-224ENST00000544990 LEPROTO15243 131 aa4.46□□□□□ -1.7
CPSF7-224ENST00000544990 BCE1O60756 84 aa4.46□□□□□ -1.7
CPSF7-224ENST00000544990 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
CPSF7-224ENST00000544990 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
CPSF7-224ENST00000544990 IGKV2-28A0A075B6P5 120 aa4.45□□□□□ -1.7
CPSF7-224ENST00000544990 IGKV2D-28P01615 120 aa4.45□□□□□ -1.7
CPSF7-224ENST00000544990 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
CPSF7-224ENST00000544990 PMCHL2Q9BQD1 86 aa4.45□□□□□ -1.7
CPSF7-224ENST00000544990 IGLV1-50A0A075B6I6 118 aa4.44□□□□□ -1.7
CPSF7-224ENST00000544990 SYS1-DBNDD2H3BUS1 97 aa4.44□□□□□ -1.7
CPSF7-224ENST00000544990 J3QQQ9 107 aa4.44□□□□□ -1.7
CPSF7-224ENST00000544990 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
CPSF7-224ENST00000544990 NMUP48645 174 aa4.44□□□□□ -1.7
CPSF7-224ENST00000544990 UBE2AP49459 152 aa4.44□□□□□ -1.7
CPSF7-224ENST00000544990 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
CPSF7-224ENST00000544990 M0R378 163 aa4.43□□□□□ -1.7
CPSF7-224ENST00000544990 RPL13AP40429 203 aaKnown RBP4.43□□□□□ -1.7
CPSF7-224ENST00000544990 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
CPSF7-224ENST00000544990 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
CPSF7-224ENST00000544990 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
CPSF7-224ENST00000544990 IGKV2D-26A0A0A0MRZ7 120 aa4.42□□□□□ -1.7
CPSF7-224ENST00000544990 E9PLD3 99 aa4.42□□□□□ -1.7
CPSF7-224ENST00000544990 KRTAP1-4P0C5Y4 121 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms