RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	MANBAL	Q9NQG1	85 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	SMG6	Q86US8	1419 aa	Known RBP	-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	CEP290	O15078	2479 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	PSME4	Q14997	1843 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	PHLPP1	O60346	1717 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639		A0A0C4DFX4	3053 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	FOCAD	Q5VW36	1801 aa		-0.93	□□□□□ -2.56
RAP1B-231	ENST00000544639	TRAPPC2	P0DI81	140 aa		-0.93	□□□□□ -2.56
RAP1B-231	ENST00000544639	TRAPPC2B	P0DI82	140 aa		-0.93	□□□□□ -2.56
RAP1B-231	ENST00000544639	CCDC58	Q4VC31	144 aa		-0.93	□□□□□ -2.56
RAP1B-231	ENST00000544639	PDE4DIP	Q5VU43	2346 aa		-0.93	□□□□□ -2.56
RAP1B-231	ENST00000544639	ADGRL2	O95490	1459 aa		-0.93	□□□□□ -2.56
RAP1B-231	ENST00000544639	ROBO1	Q9Y6N7	1651 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	CEP295	Q9C0D2	2601 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	CLIP1	P30622	1438 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	EDC4	Q6P2E9	1401 aa	Known RBP	-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	NCOA3	Q9Y6Q9	1424 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639		A0A087WVE0	104 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	SPTY2D1-AS1	A0A0U1RR47	76 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639		H0YAA0	97 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639		K7EP34	96 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	DEFB1	P60022	68 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	GNG11	P61952	73 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639		S4R3F8	94 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	SHROOM2	Q13796	1616 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	CELSR3	Q9NYQ7	3312 aa		-0.94	□□□□□ -2.56
RAP1B-231	ENST00000544639	FRY	Q5TBA9	3013 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639		A0A0G2JND7	137 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	COX6C	P09669	75 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	SAA2	P0DJI9	122 aa	Predicted RBP	-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	FGF7	P21781	194 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	GNGT1	P63211	74 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	MT1X	P80297	61 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	DEFB110	Q30KQ9	67 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	KRTAP19-5	Q3LI72	72 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	DEFB107A	Q8IZN7	70 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	MAP3K1	Q13233	1512 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	KIAA1551	Q9HCM1	1747 aa		-0.95	□□□□□ -2.56
RAP1B-231	ENST00000544639	NBEAL2	Q6ZNJ1	2754 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	CSMD1	Q96PZ7	3565 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	DNAH8	Q96JB1	4490 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	ACACB	O00763	2458 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	SCN7A	Q01118	1682 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	TRBV7-7	A0A0K0K1E9	115 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639		F6UZH7	168 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639		H3BQF6	201 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639		Q0VG73	95 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	C12orf57	Q99622	126 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	DPH3P1	Q9H4G8	78 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	LINC00846	Q9NV44	126 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	ITPR1	Q14643	2758 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	FAM186A	A6NE01	2351 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	C5orf42	Q9H799	3197 aa		-0.96	□□□□□ -2.56
RAP1B-231	ENST00000544639	MRC2	Q9UBG0	1479 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	LRRC37A	A6NMS7	1700 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	RANBP2	P49792	3224 aa	Known RBP	-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	COL14A1	Q05707	1796 aa	Known RBP	-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639		H0Y9P7	68 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	ARMS2	P0C7Q2	107 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	MT1HL1	P0DM35	61 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	HSD52	Q0P140	79 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	PSENEN	Q9NZ42	101 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	PRO1854	Q9UHT4	67 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	DIP2C	Q9Y2E4	1556 aa		-0.97	□□□□□ -2.56
RAP1B-231	ENST00000544639	MAPKBP1	O60336	1514 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	UBE2L5P	A0A1B0GUS4	154 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	C7orf77	A4D0Y5	90 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639		K7EP13	123 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	AKAIN1	P0CW23	69 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	UBE2L3	P68036	154 aa	Known RBP	-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	PP6455	Q8WZ26	134 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	VAMP8	Q9BV40	100 aa		-0.98	□□□□□ -2.57
RAP1B-231	ENST00000544639	A2ML1	A8K2U0	1454 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	CUX1	P39880	1505 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	TOP2B	Q02880	1626 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	NAP1L6	A6NFF2	107 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639		H7BZZ5	65 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	NDUFA3	O95167	84 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	NMS	Q5H8A3	153 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	NUP188	Q5SRE5	1749 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	SCAPER	Q9BY12	1400 aa		-0.99	□□□□□ -2.57
RAP1B-231	ENST00000544639	ABCA13	Q86UQ4	5058 aa		-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	CHD7	Q9P2D1	2997 aa		-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	CRYM-AS1	A6NIL9	109 aa		-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	ASIP	P42127	132 aa		-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	KTN1	Q86UP2	1357 aa	Known RBP	-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	NAIP	Q13075	1403 aa		-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	ALK	Q9UM73	1620 aa		-1	□□□□□ -2.57
RAP1B-231	ENST00000544639	SMG1	Q96Q15	3661 aa	Known RBP	-1.01	□□□□□ -2.57
RAP1B-231	ENST00000544639	FAM24A	A6NFZ4	105 aa		-1.01	□□□□□ -2.57
RAP1B-231	ENST00000544639	TMEM262	E9PQX1	116 aa		-1.01	□□□□□ -2.57
RAP1B-231	ENST00000544639	ATP5E	P56381	51 aa	Predicted RBP	-1.01	□□□□□ -2.57
RAP1B-231	ENST00000544639	COX6B2	Q6YFQ2	88 aa		-1.01	□□□□□ -2.57
RAP1B-231	ENST00000544639	MYO9A	B2RTY4	2548 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	ABCC5	O15440	1437 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	ROCK2	O75116	1388 aa	Known RBP	-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	MT1E	P04732	61 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	PSMG4	Q5JS54	123 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	BCOR	Q6W2J9	1755 aa		-1.02	□□□□□ -2.57
RAP1B-231	ENST00000544639	KNDC1	Q76NI1	1749 aa		-1.02	□□□□□ -2.57

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